Jatropha Genome Database

JcPR02JBVLC.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02JBVLC.10 - phase: 2 /pseudo/partial
         (55 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase chr03_pseudo...    57   2e-09

>IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase
           chr03_pseudomolecule_IMGAG_V3 28749151-28738871 E
           EGN_Mt090430 20090702
          Length = 899

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEP+AYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 593 LMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEAS 636