Jatropha Genome Database

JcPR02I9SQ6.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02I9SQ6.10 - phase: 2 /partial
         (118 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g138750.1 Methyltransferase small chr08_pseudomolecul...    65   1e-11

>IMGA|Medtr8g138750.1 Methyltransferase small
           chr08_pseudomolecule_IMGAG_V3 33633195-33626529 E
           EGN_Mt090430 20090702
          Length = 534

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 32/40 (80%)

Query: 50  LQTSSCKFDLKEPYYRMSQPQVYGMAQDQQPHQMINAQVI 89
           LQTSSCK DLKEPYYRMSQPQ Y +AQDQQP  ++  Q I
Sbjct: 464 LQTSSCKLDLKEPYYRMSQPQAYPLAQDQQPQPLVQTQDI 503