Jatropha Genome Database

JcPR01E1J32.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01E1J32.10 + phase: 0 
         (57 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ; chr01_pseudomolecule...   101   9e-23
IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ; chr01_ps...    97   2e-21
IMGA|Medtr1g065780.1 Aconitate hydratase, N-terminal; ; chr01_ps...    94   1e-20

>IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ;
           chr01_pseudomolecule_IMGAG_V3 13193763-13202569 E
           EGN_Mt090430 20090702
          Length = 508

 Score =  101 bits (252), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 45/46 (97%), Positives = 46/46 (100%)

Query: 12  VCVSTTNRNFPGRMGHREGQIYLASPYTAAASALTGYVTDPREFLQ 57
           VCVSTTNRNFPGRMGHREG+IYLASPYTAAASALTGYVTDPREFLQ
Sbjct: 463 VCVSTTNRNFPGRMGHREGEIYLASPYTAAASALTGYVTDPREFLQ 508


>IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ;
           chr01_pseudomolecule_IMGAG_V3 17586332-17579961 H
           EGN_Mt090430 20090702
          Length = 466

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 11  QVCVSTTNRNFPGRMGHREGQIYLASPYTAAASALTGYVTDPREFLQ 57
           +VCVSTTNRNFPGRMGH+EGQ+YLASPYTAAASALTG+VTDPR FLQ
Sbjct: 420 KVCVSTTNRNFPGRMGHKEGQVYLASPYTAAASALTGFVTDPRNFLQ 466


>IMGA|Medtr1g065780.1 Aconitate hydratase, N-terminal; ;
          chr01_pseudomolecule_IMGAG_V3 13210487-13211140 H
          EGN_Mt090430 20090702
          Length = 66

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 3  TTLRALLLQVCVSTTNRNFPGRMGHREGQIYLASPYTAAASALTGYVTDPREFLQ 57
          ++LR     VCVSTTNRNF GRMGH+EG+I LASPYTAAASALTGYVTDPREFLQ
Sbjct: 12 SSLRYCSESVCVSTTNRNFSGRMGHKEGEICLASPYTAAASALTGYVTDPREFLQ 66