Jatropha Genome Database

JcPR01C6D2I.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01C6D2I.10 + phase: 0 /pseudo/partial
         (103 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g103670.1 Aminotransferase class-III; ; chr04_pseudom...    89   6e-19

>IMGA|Medtr4g103670.1 Aminotransferase class-III; ;
           chr04_pseudomolecule_IMGAG_V3 22386014-22374646 E
           EGN_Mt090430 20090702
          Length = 525

 Score = 89.0 bits (219), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 31  VICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAYLPIGGVMVSP 74
           VICAFGRLG MFGCDKYNIKPDLVS+AKALSSAY+PIG ++VSP
Sbjct: 309 VICAFGRLGYMFGCDKYNIKPDLVSLAKALSSAYMPIGAILVSP 352