Jatropha Genome Database

JcPR01BVAYK.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01BVAYK.10 + phase: 0 /partial
         (64 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g103680.1 Nitrate-induced NOI chr05_pseudomolecule_IM...    87   3e-18
IMGA|Medtr4g138110.1 Nitrate-induced NOI chr04_pseudomolecule_IM...    72   6e-14
IMGA|Medtr8g109980.1 Nitrate-induced NOI chr08_pseudomolecule_IM...    67   2e-12
IMGA|Medtr3g102900.1 Nitrate-induced NOI chr03_pseudomolecule_IM...    65   6e-12
IMGA|Medtr5g105950.1 Nitrate-induced NOI chr05_pseudomolecule_IM...    55   9e-09
IMGA|Medtr2g029230.1 Nitrate-induced NOI chr02_pseudomolecule_IM...    46   4e-06

>IMGA|Medtr5g103680.1 Nitrate-induced NOI
          chr05_pseudomolecule_IMGAG_V3 41525357-41527818 F
          EGN_Mt090430 20090702
          Length = 76

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 46/49 (93%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNSSFKP 49
          +PLPKFGEWDVNDPASAEG+TVIFNKAR+EKKTGGKP+SPA+ N+  +P
Sbjct: 5  RPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPESPAKANTQTRP 53


>IMGA|Medtr4g138110.1 Nitrate-induced NOI
          chr04_pseudomolecule_IMGAG_V3 34169170-34170283 E
          EGN_Mt090430 20090702
          Length = 75

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/35 (94%), Positives = 35/35 (100%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG 35
          +PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG
Sbjct: 9  RPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 43


>IMGA|Medtr8g109980.1 Nitrate-induced NOI
          chr08_pseudomolecule_IMGAG_V3 24814756-24816250 E
          EGN_Mt090430 20090702
          Length = 94

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/33 (90%), Positives = 33/33 (100%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKT 33
          +PLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT
Sbjct: 8  RPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT 40


>IMGA|Medtr3g102900.1 Nitrate-induced NOI
          chr03_pseudomolecule_IMGAG_V3 25221457-25220364 H
          EGN_Mt090430 20090702
          Length = 82

 Score = 65.5 bits (158), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 32/34 (94%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
          +PLPKFGEWDVNDP+SAEGFTVIFNKAR++KK  
Sbjct: 10 KPLPKFGEWDVNDPSSAEGFTVIFNKARDDKKIA 43


>IMGA|Medtr5g105950.1 Nitrate-induced NOI
          chr05_pseudomolecule_IMGAG_V3 42579990-42577138 E
          EGN_Mt090430 20090702
          Length = 98

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 4  PKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNSS-FKPGSNTLGKPQSVS 61
          PKFGEWD ND +SA G+TVIFNK + EK+ GGK  SP  +++S      + LGK  SVS
Sbjct: 4  PKFGEWDANDSSSANGYTVIFNKIKEEKR-GGKFQSPPNNSASNAHKRKDFLGKTLSVS 61


>IMGA|Medtr2g029230.1 Nitrate-induced NOI
           chr02_pseudomolecule_IMGAG_V3 7746513-7748881 E
           EGN_Mt090430 20090702
          Length = 232

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 25/30 (83%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKK 32
           +P+FG+WDV DP S EG+TV+F+K + EK+
Sbjct: 159 IPEFGKWDVTDPKSGEGYTVMFSKIKEEKQ 188