Jatropha Genome Database

JcCD0179138.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0179138.10 + phase: 1 /pseudo/partial
         (194 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   231   2e-61
IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   231   2e-61
IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   231   2e-61

>IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr02_pseudomolecule_IMGAG_V3 32376549-32372121 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  231 bits (588), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 118/138 (85%)

Query: 14  GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLMPQCAIIVATIRALKMHGGGPEVVAGRPL 73
           GPGGFVVTEAGFGADIGTEKFMNIKCRYSGL PQCAIIVATIRALKMHGGGP VVAG+PL
Sbjct: 406 GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPL 465

Query: 74  DHAYTTENVPLVEAGCVNLARHISNTKSYGVNVVVAVNMFSTDTEAELSAVKNXXXXXXX 133
           DHAY TENV LVEAGC NLARHI N+K+YG NV+VA+N FSTDT+AEL+AVK        
Sbjct: 466 DHAYLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGA 525

Query: 134 XXXVVCTHHAHGGKGAVS 151
              V+C+HHAHGG+GAV 
Sbjct: 526 YDAVICSHHAHGGRGAVD 543


>IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr05_pseudomolecule_IMGAG_V3 22553092-22548664 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  231 bits (588), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 118/138 (85%)

Query: 14  GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLMPQCAIIVATIRALKMHGGGPEVVAGRPL 73
           GPGGFVVTEAGFGADIGTEKFMNIKCRYSGL PQCAIIVATIRALKMHGGGP VVAG+PL
Sbjct: 406 GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPL 465

Query: 74  DHAYTTENVPLVEAGCVNLARHISNTKSYGVNVVVAVNMFSTDTEAELSAVKNXXXXXXX 133
           DHAY TENV LVEAGC NLARHI N+K+YG NV+VA+N FSTDT+AEL+AVK        
Sbjct: 466 DHAYLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGA 525

Query: 134 XXXVVCTHHAHGGKGAVS 151
              V+C+HHAHGG+GAV 
Sbjct: 526 YDAVICSHHAHGGRGAVD 543


>IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS
           chr01_pseudomolecule_IMGAG_V3 32386595-32382177 E
           EGN_Mt090430 20090702
          Length = 699

 Score =  231 bits (588), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 118/138 (85%)

Query: 14  GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLMPQCAIIVATIRALKMHGGGPEVVAGRPL 73
           GPGGFVVTEAGFGADIGTEKFMNIKCRYSGL PQCAIIVATIRALKMHGGGP VVAG+PL
Sbjct: 424 GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPL 483

Query: 74  DHAYTTENVPLVEAGCVNLARHISNTKSYGVNVVVAVNMFSTDTEAELSAVKNXXXXXXX 133
           DHAY TENV LVEAGC NLARHI N+K+YG NV+VA+N FSTDT+AEL+AVK        
Sbjct: 484 DHAYLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGA 543

Query: 134 XXXVVCTHHAHGGKGAVS 151
              V+C+HHAHGG+GAV 
Sbjct: 544 YDAVICSHHAHGGRGAVD 561