Jatropha Genome Database

JcCD0162764.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0162764.10 + phase: 1 /partial/short
         (47 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g071750.2 Protein of unknown function DUF1692 chr05_p...    82   8e-17
IMGA|Medtr5g071750.1 Protein of unknown function DUF1692 chr05_p...    81   1e-16

>IMGA|Medtr5g071750.2 Protein of unknown function DUF1692
          chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
          EGN_Mt090430 20090702
          Length = 312

 Score = 81.6 bits (200), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 1  MEGMMSKLRSLDAYPKINEDFYSRTFSGGVITIASSIVMLLLFISEL 47
          M+ +M+KLR+LDAYPKINEDFYSRT SGG+ITI SSI+MLLLF SEL
Sbjct: 1  MDSIMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSEL 47


>IMGA|Medtr5g071750.1 Protein of unknown function DUF1692
          chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
          EGN_Mt090430 20090702
          Length = 386

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 1  MEGMMSKLRSLDAYPKINEDFYSRTFSGGVITIASSIVMLLLFISEL 47
          M+ +M+KLR+LDAYPKINEDFYSRT SGG+ITI SSI+MLLLF SEL
Sbjct: 1  MDSIMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSEL 47