Jatropha Genome Database
- JcCD0138510.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCD0138510.10 + phase: 0 /pseudo/partial
(72 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti... 66 5e-12
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti... 66 5e-12
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti... 65 1e-11
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti... 64 3e-11
IMGA|Medtr7g083460.1 Transcription factor, MADS-box chr07_pseudo... 63 4e-11
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti... 62 5e-11
IMGA|Medtr7g083420.1 Transcription factor, MADS-box chr07_pseudo... 62 9e-11
IMGA|Medtr5g049120.1 Transcription factor, MADS-box chr05_pseudo... 61 1e-10
IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcripti... 58 1e-09
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti... 57 2e-09
IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti... 57 2e-09
IMGA|Medtr2g093070.1 Transcription factor, MADS-box chr02_pseudo... 56 5e-09
IMGA|Medtr5g033820.1 Transcription factor, MADS-box; Transcripti... 55 1e-08
IMGA|Medtr5g033560.1 Transcription factor, MADS-box; Transcripti... 55 1e-08
IMGA|Medtr2g009970.1 Transcription factor, MADS-box chr02_pseudo... 54 1e-08
IMGA|Medtr5g075150.1 Transcription factor, MADS-box chr05_pseudo... 54 2e-08
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti... 54 3e-08
IMGA|Medtr5g032510.1 Transcription factor, MADS-box chr05_pseudo... 51 1e-07
IMGA|Medtr5g075940.1 Transcription factor, MADS-box chr05_pseudo... 51 1e-07
IMGA|Medtr4g121660.1 Transcription factor, MADS-box chr04_pseudo... 50 2e-07
IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcripti... 49 6e-07
IMGA|Medtr4g121100.1 Transcription factor, MADS-box; Transcripti... 49 6e-07
IMGA|Medtr3g154110.1 Transcription factor, MADS-box; Transcripti... 49 6e-07
IMGA|Medtr5g021220.1 Transcription factor, MADS-box; Transcripti... 48 1e-06
>IMGA|Medtr4g147260.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr04_pseudomolecule_IMGAG_V3 36883844-36877638 E
EGN_Mt090430 20090702
Length = 241
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>IMGA|Medtr7g014840.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr07_pseudomolecule_IMGAG_V3 3593718-3599199 E
EGN_Mt090430 20090702
Length = 245
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59
>IMGA|Medtr3g104190.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr03_pseudomolecule_IMGAG_V3 25812647-25808917 E
EGN_Mt090430 20090702
Length = 246
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59
>IMGA|Medtr3g013050.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr03_pseudomolecule_IMGAG_V3 2348300-2341992 E
EGN_Mt090430 20090702
Length = 223
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
>IMGA|Medtr7g083460.1 Transcription factor, MADS-box
chr07_pseudomolecule_IMGAG_V3 17829732-17826840 E
EGN_Mt090430 20090702
Length = 61
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA+ELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 27 GLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
>IMGA|Medtr4g136380.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr04_pseudomolecule_IMGAG_V3 33294099-33299967 E
EGN_Mt090430 20090702
Length = 251
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 50 GLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN 82
>IMGA|Medtr7g083420.1 Transcription factor, MADS-box
chr07_pseudomolecule_IMGAG_V3 17798888-17800934 E
EGN_Mt090430 20090702
Length = 75
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAE+ALIIFSSRGKL EF S+
Sbjct: 27 GLLKKAYELSVLCDAEIALIIFSSRGKLSEFASS 60
>IMGA|Medtr5g049120.1 Transcription factor, MADS-box
chr05_pseudomolecule_IMGAG_V3 20917481-20915725 E
EGN_Mt090430 20090702
Length = 62
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
G+LKKAYELS+LCDAEVALIIFSSRGKLYEF S
Sbjct: 27 GMLKKAYELSLLCDAEVALIIFSSRGKLYEFCS 59
>IMGA|Medtr1g129880.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr01_pseudomolecule_IMGAG_V3 29094866-29091202 E
EGN_Mt090430 20090702
Length = 239
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+ELSVLCDAEVALIIFSS GKL+++ +
Sbjct: 27 GLLKKAFELSVLCDAEVALIIFSSLGKLFQYST 59
>IMGA|Medtr7g014850.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr07_pseudomolecule_IMGAG_V3 3615380-3622271 E
EGN_Mt090430 20090702
Length = 256
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA E+SVLCDA+VALI+FS++GKL+E+ SA
Sbjct: 27 GLLKKANEISVLCDAQVALIMFSTKGKLFEYSSA 60
>IMGA|Medtr8g077590.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr08_pseudomolecule_IMGAG_V3 15487044-15481223 E
EGN_Mt090430 20090702
Length = 240
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 27 GLLKKAHEISVLCDAEVALIVFSHKGKLFEYAT 59
>IMGA|Medtr2g093070.1 Transcription factor, MADS-box
chr02_pseudomolecule_IMGAG_V3 21531626-21530594 H
EGN_Mt090430 20090702
Length = 135
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS+LCDAEVA+I+FS+ GKLYEF S
Sbjct: 31 GLFKKAQELSILCDAEVAVIVFSTTGKLYEFSST 64
>IMGA|Medtr5g033820.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 13797730-13788961 E
EGN_Mt090430 20090702
Length = 227
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KKA ELSVLCDA+VALIIFSS GKL+E+ +
Sbjct: 27 GLIKKAEELSVLCDADVALIIFSSTGKLFEYSN 59
>IMGA|Medtr5g033560.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 13685560-13682703 E
EGN_Mt090430 20090702
Length = 228
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KKA ELSVLCDA+VALIIFSS GKL+E+ +
Sbjct: 27 GLIKKAEELSVLCDADVALIIFSSTGKLFEYSN 59
>IMGA|Medtr2g009970.1 Transcription factor, MADS-box
chr02_pseudomolecule_IMGAG_V3 2293660-2295970 E
EGN_Mt090430 20090702
Length = 92
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGY 36
GLLKKA ELS+LCDAEV LI+FSS GKLY++ S +
Sbjct: 27 GLLKKAKELSILCDAEVGLIVFSSTGKLYDYSSTRF 62
>IMGA|Medtr5g075150.1 Transcription factor, MADS-box
chr05_pseudomolecule_IMGAG_V3 27322321-27325073 E
EGN_Mt090430 20090702
Length = 133
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGY 36
G+ KKA ELS+LCDAEV L+IFS+ GKLYE+ S+ Y
Sbjct: 89 GIFKKAEELSILCDAEVGLVIFSTTGKLYEYASSKY 124
>IMGA|Medtr5g049070.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 20888794-20881921 E
EGN_Mt090430 20090702
Length = 301
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA E+SVLCDAEVALIIFS GKL+++ +
Sbjct: 27 GLLKKAKEISVLCDAEVALIIFSHNGKLFDYST 59
>IMGA|Medtr5g032510.1 Transcription factor, MADS-box
chr05_pseudomolecule_IMGAG_V3 13173743-13172519 E
EGN_Mt090430 20090702
Length = 61
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL+KKA EL++LCDA+V L+IFSS GKLYE+ +
Sbjct: 27 GLIKKAKELAILCDAQVGLVIFSSTGKLYEYANT 60
>IMGA|Medtr5g075940.1 Transcription factor, MADS-box
chr05_pseudomolecule_IMGAG_V3 27695434-27696514 E
EGN_Mt090430 20090702
Length = 66
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGY 36
GLLKKA EL++LCDAEV ++IFSS KLY+F S +
Sbjct: 27 GLLKKAKELAILCDAEVGVMIFSSTAKLYDFASTRF 62
>IMGA|Medtr4g121660.1 Transcription factor, MADS-box
chr04_pseudomolecule_IMGAG_V3 28606872-28607156 H
EGN_Mt090430 20090702
Length = 94
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGY 36
GL+KKA ELS+LCDA+V LI+FSS KLY++ S+ Y
Sbjct: 27 GLMKKAKELSILCDAQVGLILFSSTHKLYDYASSRY 62
>IMGA|Medtr1g046070.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr01_pseudomolecule_IMGAG_V3 10653449-10650286 E
EGN_Mt090430 20090702
Length = 232
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKK +ELSVLC+A++ LIIFSS GKL ++ S
Sbjct: 27 GLLKKTHELSVLCEAQIGLIIFSSTGKLSQYCS 59
>IMGA|Medtr4g121100.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr04_pseudomolecule_IMGAG_V3 28275062-28285049 F
EGN_Mt090430 20090702
Length = 239
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS LCDA++AL++FS+ KL+E+ S+
Sbjct: 53 GLFKKAQELSTLCDADIALMVFSATSKLFEYASS 86
>IMGA|Medtr3g154110.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr03_pseudomolecule_IMGAG_V3 40697496-40693649 E
EGN_Mt090430 20090702
Length = 229
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL KKA EL+VLCDA+V++I+FSS GKL+E+ S
Sbjct: 27 GLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59
>IMGA|Medtr5g021220.1 Transcription factor, MADS-box;
Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 8062970-8064886 F
EGN_Mt090430 20090702
Length = 231
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
G+ KKA+ELSVLCDA+V+LI+FS K++E+ + G
Sbjct: 27 GIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITPG 61