Jatropha Genome Database

JcCD0116228.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0116228.10 - phase: 1 /partial
         (61 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g116250.1 Tyrosine protein kinase chr08_pseudomolecul...    96   7e-21
IMGA|Medtr5g049220.1 Protein kinase chr05_pseudomolecule_IMGAG_V...    68   1e-12
IMGA|Medtr5g049180.1 Protein kinase chr05_pseudomolecule_IMGAG_V...    67   2e-12
IMGA|Medtr5g049190.1 Protein kinase chr05_pseudomolecule_IMGAG_V...    59   6e-10
IMGA|Medtr5g049240.1 Protein kinase chr05_pseudomolecule_IMGAG_V...    58   1e-09

>IMGA|Medtr8g116250.1 Tyrosine protein kinase
           chr08_pseudomolecule_IMGAG_V3 26304392-26301038 E
           EGN_Mt090430 20090702
          Length = 893

 Score = 95.5 bits (236), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 47/60 (78%)

Query: 1   GTPVHKDYVVLIPGGSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGPNP 60
           G PVHKDYVV  P G PQ D+WLALHPN   KS YYDA+LNGVEIFKI+ + GNLAG NP
Sbjct: 362 GVPVHKDYVVFAPNGPPQQDLWLALHPNTASKSNYYDAILNGVEIFKISDSKGNLAGTNP 421


>IMGA|Medtr5g049220.1 Protein kinase chr05_pseudomolecule_IMGAG_V3
           21023454-21019745 H EGN_Mt090430 20090702
          Length = 857

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 1   GTPVHKDYVVLIPGGS-PQSDMWLALHPNPELKSQYYDALLNGVEIFKIASAD-GNLAGP 58
           G  +++DYVVL+P  S  + D+WL LHP    K Q+Y + LNGVEIFK++S D  NLAG 
Sbjct: 364 GVAIYRDYVVLVPKDSDAKQDLWLDLHPYKYSKPQFYRSFLNGVEIFKLSSVDKKNLAGL 423

Query: 59  NPT 61
           NP+
Sbjct: 424 NPS 426


>IMGA|Medtr5g049180.1 Protein kinase chr05_pseudomolecule_IMGAG_V3
           21007358-21004608 H EGN_Mt090430 20090702
          Length = 880

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 1   GTPVHKDYVVLIPGGS-PQSDMWLALHPNPELKSQYYDALLNGVEIFKIASAD-GNLAGP 58
           G  +++DYVVL+P  S  + D+WL LHP    K  +YD  LNGVEIFK++S D  NLAG 
Sbjct: 365 GVVIYRDYVVLVPNDSDSKQDLWLDLHPCEYSKPHFYDTYLNGVEIFKLSSVDKKNLAGL 424

Query: 59  NPT 61
           NP+
Sbjct: 425 NPS 427


>IMGA|Medtr5g049190.1 Protein kinase chr05_pseudomolecule_IMGAG_V3
           21010555-21008849 H EGN_Mt090430 20090702
          Length = 568

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 4/56 (7%)

Query: 2   TPVHKDYVVLIPGGSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAG 57
           TP+++DYVV++P       M ++LHPN E K +Y DA+LNGVEI K++ ++ NLA 
Sbjct: 135 TPLYRDYVVMVP----IETMLISLHPNLESKPKYADAILNGVEIIKLSDSNYNLAA 186


>IMGA|Medtr5g049240.1 Protein kinase chr05_pseudomolecule_IMGAG_V3
           21027391-21024962 H EGN_Mt090430 20090702
          Length = 809

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 4/56 (7%)

Query: 2   TPVHKDYVVLIPGGSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAG 57
           TP+++DYVV++P       M ++LHPN E K +Y DA+LNGVEI K++ ++ NLA 
Sbjct: 376 TPLYRDYVVMVP----IETMLISLHPNLESKPKYADAILNGVEIIKLSDSNYNLAA 427