Jatropha Genome Database

JcCD0092337.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0092337.10 - phase: 0 /pseudo/partial
         (89 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g034760.1 Protein of unknown function DUF89 chr07_pse...    83   3e-17
IMGA|Medtr7g034770.1 Protein of unknown function DUF89 chr07_pse...    82   9e-17
IMGA|Medtr6g069730.2 Protein of unknown function DUF89 chr06_pse...    78   1e-15

>IMGA|Medtr7g034760.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8352606-8356264 E
           EGN_Mt090430 20090702
          Length = 369

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 45/52 (86%)

Query: 1   VILAANDLPSINDVTYPELIEIILKLKDGSGQLVGVDASNLLIANSGNDLPV 52
           V+LAANDLPSINDVTY ELIEII KLKD  G+L+GV  S LLIANSGNDLPV
Sbjct: 248 VVLAANDLPSINDVTYSELIEIISKLKDEEGRLLGVSTSKLLIANSGNDLPV 299


>IMGA|Medtr7g034770.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8360789-8366214 H
           EGN_Mt090430 20090702
          Length = 370

 Score = 81.6 bits (200), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 45/51 (88%)

Query: 1   VILAANDLPSINDVTYPELIEIILKLKDGSGQLVGVDASNLLIANSGNDLP 51
           VILAANDLPSINDVTY ELIEII +LKD  G+L+GV  SNLLIANSG+DLP
Sbjct: 249 VILAANDLPSINDVTYSELIEIISQLKDEEGRLLGVSTSNLLIANSGSDLP 299


>IMGA|Medtr6g069730.2 Protein of unknown function DUF89
           chr06_pseudomolecule_IMGAG_V3 12965534-12969084 E
           EGN_Mt090430 20090702
          Length = 181

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 4/56 (7%)

Query: 1   VILAANDLPSINDVTYPELIEIILK----LKDGSGQLVGVDASNLLIANSGNDLPV 52
           V+LAANDLPSINDVTY EL+EII K    LKD  G LVGV  SNLLIANSGNDLPV
Sbjct: 54  VVLAANDLPSINDVTYSELVEIISKVGFQLKDEEGNLVGVSTSNLLIANSGNDLPV 109