Jatropha Genome Database

JcCD0077184.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0077184.10 + phase: 0 /partial
         (130 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g157420.1 Orn/DAP/Arg decarboxylase 2 chr03_pseudomol...   156   3e-39

>IMGA|Medtr3g157420.1 Orn/DAP/Arg decarboxylase 2
           chr03_pseudomolecule_IMGAG_V3 41516251-41514746 E
           EGN_Mt090430 20090702
          Length = 428

 Score =  156 bits (394), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 72/109 (66%), Positives = 89/109 (81%)

Query: 5   EEAEPFYLIDLGVVIRLMDKWNQSLPNVKPFYAVKCNTEPALLLSLATLGANFDCASQAE 64
           E   PF ++DL V+I LM+KW   LP VKPFYAVKCN   +L+ +LA+LG+NFDCAS+AE
Sbjct: 53  ENDSPFSVLDLRVIIDLMNKWTTELPTVKPFYAVKCNPNISLIGTLASLGSNFDCASRAE 112

Query: 65  IETILGLGVNPDRIVYANPCKSVSHIKYAARVGVNLTTFDSKQEVDKIK 113
           IE++L LGV+PD+I+YANPCKS SHIKYAA VGVN+TTFD   EV+KIK
Sbjct: 113 IESVLSLGVSPDKIIYANPCKSESHIKYAASVGVNVTTFDCAGEVEKIK 161