Jatropha Genome Database

JcCD0070253.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0070253.10 - phase: 1 /pseudo/partial
         (190 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g137820.1 ALG2-interacting protein X, putative chr01_...   208   1e-54

>IMGA|Medtr1g137820.1 ALG2-interacting protein X, putative
           chr01_pseudomolecule_IMGAG_V3 30612171-30608776 E
           EGN_Mt090430 20090702
          Length = 659

 Score =  208 bits (529), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/125 (82%), Positives = 112/125 (89%)

Query: 66  KENDRVYLMRVXXXXXXXXXXAFSMVKPMAMNEVLDASKEKMFASLVPDSSAKALSRYTE 125
           KENDRVYLMRV          AF+MVKPM M+EVLDASKEKMFASLVPD+SAKALSRYTE
Sbjct: 330 KENDRVYLMRVPPASSLSPLPAFAMVKPMVMSEVLDASKEKMFASLVPDNSAKALSRYTE 389

Query: 126 MVDEVIRTQAEKLQQASELTRVRLKEMDLPESILALEGNFTLPADLKEDVEAVQISGGPA 185
           MVD +IRTQAEKLQQASELTRVRL+EM+LP+SILALEGNFTLP +LKEDVEAVQISGGPA
Sbjct: 390 MVDGIIRTQAEKLQQASELTRVRLREMELPDSILALEGNFTLPTNLKEDVEAVQISGGPA 449

Query: 186 GLEAE 190
           GLE+E
Sbjct: 450 GLESE 454