Jatropha Genome Database

JcCD0068708.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0068708.10 + phase: 0 
         (82 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g018570.1 Terpenoid cylases/protein prenyltransferase...   117   2e-27
IMGA|Medtr8g018660.1 Terpenoid cylases/protein prenyltransferase...   116   3e-27
IMGA|Medtr8g018620.1 Terpenoid cylases/protein prenyltransferase...   115   4e-27
IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase chr04_ps...   112   4e-26
IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase chr04_ps...   111   9e-26
IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase chr08_ps...   103   2e-23
IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase chr05_ps...    88   1e-18
IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase chr06_ps...    73   3e-14
IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase chr06_ps...    73   3e-14

>IMGA|Medtr8g018570.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3394564-3394343 E EGN_Mt090430 20090702
          Length = 73

 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GG +PY++STNN+VGRQ WEFD DAGTPEER+ VE+ RQ+FY+NR +VKP S
Sbjct: 1  MWRLKIADGGKDPYIFSTNNFVGRQTWEFDADAGTPEERSQVEKARQHFYDNRFKVKPCS 60

Query: 61 DLLWRMQV 68
          DLLWR QV
Sbjct: 61 DLLWRFQV 68


>IMGA|Medtr8g018660.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3445206-3444949 E EGN_Mt090430 20090702
          Length = 85

 Score =  116 bits (291), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 61/68 (89%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GGN+P+++STNN++GRQ WEFDP+AGT EERA VE+ RQ+FYNNR +VKP S
Sbjct: 1  MWRLKIADGGNDPHIFSTNNFLGRQTWEFDPNAGTSEERAQVEKARQHFYNNRFKVKPCS 60

Query: 61 DLLWRMQV 68
          DLLWR QV
Sbjct: 61 DLLWRFQV 68


>IMGA|Medtr8g018620.1 Terpenoid cylases/protein prenyltransferase
          alpha-alpha toroid chr08_pseudomolecule_IMGAG_V3
          3414826-3414226 E EGN_Mt090430 20090702
          Length = 68

 Score =  115 bits (289), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GGN+PY++STNN++GRQ WEFDP+AGT EERA VE+ RQ+FYNNR +VKP S
Sbjct: 1  MWRLKIADGGNDPYIFSTNNFLGRQTWEFDPNAGTSEERAQVEKARQHFYNNRFKVKPCS 60

Query: 61 DLLWRMQ 67
          DLLWR Q
Sbjct: 61 DLLWRFQ 67


>IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase
          chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
          EGN_Mt090430 20090702
          Length = 527

 Score =  112 bits (281), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 58/68 (85%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LKI EG NEPYL+STNN+VGRQ WE+DP+AG+ EERA VE+ R+NFY+NR +VKP  
Sbjct: 1  MWKLKIGEGKNEPYLFSTNNFVGRQTWEYDPEAGSEEERAQVEEARKNFYDNRFKVKPCG 60

Query: 61 DLLWRMQV 68
          DLLWR QV
Sbjct: 61 DLLWRFQV 68


>IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase
          chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
          EGN_Mt090430 20090702
          Length = 771

 Score =  111 bits (277), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 58/68 (85%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LKI EG NEPYL+STNN+VGRQ WE+DP+AG+ EERA VE+ R+NFY+NR +VKP  
Sbjct: 1  MWKLKIGEGKNEPYLFSTNNFVGRQTWEYDPEAGSEEERAQVEEARKNFYDNRFKVKPCG 60

Query: 61 DLLWRMQV 68
          DLLWR QV
Sbjct: 61 DLLWRFQV 68


>IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase
          chr08_pseudomolecule_IMGAG_V3 3386915-3381869 E
          EGN_Mt090430 20090702
          Length = 564

 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/68 (67%), Positives = 54/68 (79%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          M RLKIA+GG +PY++S NN+VGRQ WEFD DAGTPEERA VE   +NFY+N   VKP S
Sbjct: 1  MRRLKIADGGKDPYIFSLNNFVGRQTWEFDLDAGTPEERAQVETAHKNFYDNCFYVKPCS 60

Query: 61 DLLWRMQV 68
          DLLWR Q+
Sbjct: 61 DLLWRFQI 68


>IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase
          chr05_pseudomolecule_IMGAG_V3 1770254-1758822 E
          EGN_Mt090430 20090702
          Length = 757

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LK+AEGG+ P+L + NN+VGRQ+WEFDP++G+P++ A +E VRQNF NNR   K S 
Sbjct: 1  MWKLKVAEGGS-PWLRTLNNHVGRQLWEFDPNSGSPQDLADIESVRQNFRNNRFSHKHSD 59

Query: 61 DLLWRMQVG 69
          DLL R+Q  
Sbjct: 60 DLLMRIQFA 68


>IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase
          chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
          EGN_Mt090430 20090702
          Length = 772

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 1  MWRLKIAEG--GNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKP 58
          MW+LK ++   G E  + S N  +GRQ WE+DP+ GT ++RA VEQ R+ F+ NR + K 
Sbjct: 1  MWKLKFSKNKDGTEELVRSVNKNIGRQFWEYDPNLGTEQKRAQVEQARKQFHENRFKTKN 60

Query: 59 SSDLLWRMQV 68
          SSDLL R+QV
Sbjct: 61 SSDLLMRLQV 70


>IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase
          chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
          EGN_Mt090430 20090702
          Length = 684

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 1  MWRLKIAEG--GNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKP 58
          MW+LK ++   G E  + S N  +GRQ WE+DP+ GT ++RA VEQ R+ F+ NR + K 
Sbjct: 1  MWKLKFSKNKDGTEELVRSVNKNIGRQFWEYDPNLGTEQKRAQVEQARKQFHENRFKTKN 60

Query: 59 SSDLLWRMQV 68
          SSDLL R+QV
Sbjct: 61 SSDLLMRLQV 70