Jatropha Genome Database

JcCD0062613.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0062613.10 - phase: 0 /partial
         (135 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g157400.1 C2 chr03_pseudomolecule_IMGAG_V3 41495274-4...   241   6e-65
IMGA|Medtr4g137270.1 C2 chr04_pseudomolecule_IMGAG_V3 33787302-3...   228   6e-61
IMGA|Medtr5g023030.1 C2 chr05_pseudomolecule_IMGAG_V3 9013048-90...   200   1e-52
IMGA|Medtr5g011200.1 C2 chr05_pseudomolecule_IMGAG_V3 2992717-29...   134   2e-32
IMGA|Medtr2g126370.1 C2; Peptidase, cysteine peptidase active si...   132   6e-32
IMGA|Medtr5g011190.1 C2 chr05_pseudomolecule_IMGAG_V3 2986879-29...   131   8e-32
IMGA|Medtr7g083520.1 C2; Phospholipase D, plant chr07_pseudomole...   131   1e-31
IMGA|Medtr4g005220.1 C2 chr04_pseudomolecule_IMGAG_V3 125007-128...   125   6e-30
IMGA|Medtr3g137270.1 C2 chr03_pseudomolecule_IMGAG_V3 34777871-3...   114   2e-26
IMGA|Medtr3g136960.1 C2 chr03_pseudomolecule_IMGAG_V3 34651442-3...   114   2e-26
IMGA|Medtr3g136890.1 C2 chr03_pseudomolecule_IMGAG_V3 34640677-3...   108   6e-25
IMGA|Medtr2g121470.1 Phospholipase D, plant chr02_pseudomolecule...   105   8e-24

>IMGA|Medtr3g157400.1 C2 chr03_pseudomolecule_IMGAG_V3
           41495274-41504794 E EGN_Mt090430 20090702
          Length = 861

 Score =  241 bits (616), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 115/136 (84%), Positives = 126/136 (92%), Gaps = 2/136 (1%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  F+   CWEDICHAILEAHHLVYIVGWSI+HKVKLVREPT+PLP+GGNLNLG+LLKYK
Sbjct: 225 GVEFQQGKCWEDICHAILEAHHLVYIVGWSIFHKVKLVREPTKPLPNGGNLNLGELLKYK 284

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEG+RVL+LVWDDKTSHSKFFINT+G+MQTHDEETRKFFKHSSV+CVLSPRYASSKLSI
Sbjct: 285 SQEGLRVLLLVWDDKTSHSKFFINTNGIMQTHDEETRKFFKHSSVSCVLSPRYASSKLSI 344

Query: 121 FKQQAC--LYSVPLTV 134
           FKQQAC  L+ V L V
Sbjct: 345 FKQQACFMLWVVDLVV 360


>IMGA|Medtr4g137270.1 C2 chr04_pseudomolecule_IMGAG_V3
           33787302-33783568 H EGN_Mt090430 20090702
          Length = 849

 Score =  228 bits (581), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 118/128 (92%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G +F+H  CWEDICHAILEAHH++YI+GWSI+H VKLVREPT+PLPSGG L+LG+LLKYK
Sbjct: 218 GKMFQHSKCWEDICHAILEAHHMIYIIGWSIFHPVKLVREPTKPLPSGGELSLGELLKYK 277

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEG+RV+ML+WDD+TSH KF + T GVMQTHDEET+KFFKHS+V+C+LSPRYAS+KLSI
Sbjct: 278 SQEGLRVVMLIWDDRTSHDKFLLKTEGVMQTHDEETKKFFKHSTVHCILSPRYASNKLSI 337

Query: 121 FKQQACLY 128
           FKQQAC Y
Sbjct: 338 FKQQACSY 345


>IMGA|Medtr5g023030.1 C2 chr05_pseudomolecule_IMGAG_V3
           9013048-9022609 E EGN_Mt090430 20090702
          Length = 881

 Score =  200 bits (509), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 89/120 (74%), Positives = 105/120 (87%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G V++ + CWEDIC+AI EAHH+VY+ GWSIY KVKLVREP+RPLP GG+L LGDLLKYK
Sbjct: 238 GKVYRAENCWEDICYAITEAHHMVYLAGWSIYDKVKLVREPSRPLPKGGDLTLGDLLKYK 297

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           S+EGVRVL+LVWDDKTSH K F  T+GVM+THDEETRKFFKHSSV CVL+PRYAS + ++
Sbjct: 298 SEEGVRVLLLVWDDKTSHDKLFFKTTGVMETHDEETRKFFKHSSVMCVLAPRYASMESNV 357


>IMGA|Medtr5g011200.1 C2 chr05_pseudomolecule_IMGAG_V3
           2992717-2988497 H EGN_Mt090430 20090702
          Length = 848

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 4/124 (3%)

Query: 3   VFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQ 62
           +++   CW+DI  AI +A  LVYIVGWS+Y+ V L+R+ TR    G +  LGDLLK KSQ
Sbjct: 239 IYESGNCWQDIFDAISQARRLVYIVGWSVYYNVSLIRD-TR---DGKDCTLGDLLKAKSQ 294

Query: 63  EGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFK 122
           EGVRVL+LVWDD TS S F   T G+M T+DEETR FFKHSSV  +L PR      S  K
Sbjct: 295 EGVRVLLLVWDDPTSKSMFGYKTVGLMNTYDEETRSFFKHSSVKVLLCPRSGGKGHSWLK 354

Query: 123 QQAC 126
           QQ  
Sbjct: 355 QQEA 358


>IMGA|Medtr2g126370.1 C2; Peptidase, cysteine peptidase active site
           chr02_pseudomolecule_IMGAG_V3 30599191-30604227 E
           EGN_Mt090430 20090702
          Length = 809

 Score =  132 bits (331), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 3/123 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++   CWED+  AI +A HL+YI GWS+Y ++ LVR+  RP P GG++ LG+LLK K
Sbjct: 202 GQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKP-GGDITLGELLKKK 260

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           +QEGVRVLMLVWDD+TS     +   G+M THD+ET +FF+ S V+CVL PR      SI
Sbjct: 261 AQEGVRVLMLVWDDRTSVP--LLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSI 318

Query: 121 FKQ 123
            + 
Sbjct: 319 VQN 321


>IMGA|Medtr5g011190.1 C2 chr05_pseudomolecule_IMGAG_V3
           2986879-2982001 H EGN_Mt090430 20090702
          Length = 854

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 4/123 (3%)

Query: 4   FKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQE 63
           ++   CW DI  AI +A  LVYIVGWS+Y+ V L+R+ TR    G +  LGDLLK KSQE
Sbjct: 246 YESGNCWHDIFDAISQARRLVYIVGWSVYYNVSLIRD-TR---DGKDCTLGDLLKAKSQE 301

Query: 64  GVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFKQ 123
           GVRVL+LVWDD TS+S     T G+M T+DEETR FFKHSSV  +L PR      S+ KQ
Sbjct: 302 GVRVLLLVWDDPTSNSMLGYKTVGLMNTYDEETRSFFKHSSVRVLLCPRSGGKGHSLLKQ 361

Query: 124 QAC 126
           Q  
Sbjct: 362 QEA 364


>IMGA|Medtr7g083520.1 C2; Phospholipase D, plant
           chr07_pseudomolecule_IMGAG_V3 17858755-17865497 E
           EGN_Mt090430 20090702
          Length = 1114

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 4/124 (3%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  + +  CW DI  AI +A  L+YI GWS++HKV+L+R+         +  LGDLLK K
Sbjct: 503 GMFYVNGKCWHDIFDAISQARRLIYITGWSVWHKVRLIRDAGY----SSDYTLGDLLKTK 558

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+L+WDD TS S     T GVM THDEETR+FFKHSSV+ +L PR A  + S 
Sbjct: 559 SQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRSAGKRHSW 618

Query: 121 FKQQ 124
            KQ+
Sbjct: 619 VKQR 622


>IMGA|Medtr4g005220.1 C2 chr04_pseudomolecule_IMGAG_V3 125007-128894
           E EGN_Mt090430 20090702
          Length = 666

 Score =  125 bits (314), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 3/122 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++   CWEDI  AI  A H++YI GWS+Y ++ LVR+  RP  +GG+  +G+LLK K
Sbjct: 202 GKTYQPHRCWEDIFDAITNAKHMIYITGWSVYTEISLVRDSRRP-KAGGDTTIGELLKKK 260

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           S EGVRVLMLVWDD+TS     +   G+M THDEET  FF+ + V+CVL PR      SI
Sbjct: 261 SSEGVRVLMLVWDDRTSVG--LLKKDGLMATHDEETANFFEGTDVHCVLCPRNPDDGGSI 318

Query: 121 FK 122
            +
Sbjct: 319 IQ 320


>IMGA|Medtr3g137270.1 C2 chr03_pseudomolecule_IMGAG_V3
           34777871-34781303 E EGN_Mt090430 20090702
          Length = 826

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 4/114 (3%)

Query: 9   CWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQEGVRVL 68
           CWED C+AI +A H + I GWS+Y ++ L+R+P     +   + LG+LLK K+ EGV VL
Sbjct: 222 CWEDTCNAINDAKHFICITGWSVYTEITLIRDPNE--STRATITLGELLKKKANEGVNVL 279

Query: 69  MLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFK 122
           MLVWDD+TS   F     G+M THD+ET ++F++++V+CVL PR      SI +
Sbjct: 280 MLVWDDRTSVPDF--KKDGLMATHDQETAEYFRNTNVHCVLCPRNPGDGRSIVQ 331


>IMGA|Medtr3g136960.1 C2 chr03_pseudomolecule_IMGAG_V3
           34651442-34654874 E EGN_Mt090430 20090702
          Length = 826

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 4/114 (3%)

Query: 9   CWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQEGVRVL 68
           CWED C+AI +A H + I GWS+Y ++ L+R+P     +   + LG+LLK K+ EGV VL
Sbjct: 222 CWEDTCNAINDAKHFICITGWSVYTEITLIRDPNE--STRATITLGELLKKKANEGVNVL 279

Query: 69  MLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFK 122
           MLVWDD+TS   F     G+M THD+ET ++F++++V+CVL PR      SI +
Sbjct: 280 MLVWDDRTSVPDF--KKDGLMATHDQETAEYFRNTNVHCVLCPRKPGDGRSIVQ 331


>IMGA|Medtr3g136890.1 C2 chr03_pseudomolecule_IMGAG_V3
           34640677-34643738 E EGN_Mt090430 20090702
          Length = 822

 Score =  108 bits (271), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 77/114 (67%), Gaps = 4/114 (3%)

Query: 9   CWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQEGVRVL 68
           CWEDI +AI+ A   +YI GWS++ ++ L+R+P +   S  ++ LG++LK K+ EGV VL
Sbjct: 221 CWEDIYNAIMNAKVFIYITGWSVHTEITLIRDPNKTTES--SITLGEMLKKKANEGVNVL 278

Query: 69  MLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFK 122
           +LVWDD+TS   F     G+M THD+ET ++FK++ V+CVL PR      SI +
Sbjct: 279 VLVWDDRTSVPAF--KKDGLMGTHDQETAEYFKNTKVHCVLCPRNPDGGKSIVQ 330


>IMGA|Medtr2g121470.1 Phospholipase D, plant
           chr02_pseudomolecule_IMGAG_V3 28838178-28834464 H
           EGN_Mt090430 20090702
          Length = 756

 Score =  105 bits (261), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 2/112 (1%)

Query: 10  WEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQEGVRVLM 69
           WED+  AI  A +LVYI GWS   K+ LVR+P   +P    + LG+LLK K++EGV V +
Sbjct: 185 WEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRV 244

Query: 70  LVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIF 121
           ++WDD+TS    FI   GVM THDEE   +FKH+ V C   PR      +IF
Sbjct: 245 MIWDDETSFP--FIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIF 294