Jatropha Genome Database

JcCD0058471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0058471.10 - phase: 1 /partial
         (57 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphata...    84   2e-17
IMGA|Medtr2g104850.1 DNA topoisomerase II; Serine/threonine-spec...    83   3e-17
IMGA|Medtr1g110780.1 Galactose oxidase, central chr01_pseudomole...    55   7e-09
IMGA|Medtr1g111020.1 Serine/threonine-specific protein phosphata...    49   5e-07

>IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphatase
           and bis(5-nucleosyl)-tetraphosphatase
           chr04_pseudomolecule_IMGAG_V3 12922861-12934391 E
           EGN_Mt090430 20090702
          Length = 873

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 45/56 (80%)

Query: 1   KRVLSDAWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGM 56
           KR L+D WALDTA KPY W++L PEG+ P   MYATASARSDG+ LLCGGRD+S +
Sbjct: 120 KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 175


>IMGA|Medtr2g104850.1 DNA topoisomerase II;
           Serine/threonine-specific protein phosphatase and
           bis(5-nucleosyl)-tetraphosphatase
           chr02_pseudomolecule_IMGAG_V3 24835580-24845823 E
           EGN_Mt090430 20090702
          Length = 995

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query: 1   KRVLSDAWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGM 56
           KR L+D WALDTA KPY W++L PEG+ P   MYATASARSDG+ LLCGGRD++ +
Sbjct: 242 KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSV 297


>IMGA|Medtr1g110780.1 Galactose oxidase, central
           chr01_pseudomolecule_IMGAG_V3 23426878-23424656 E
           EGN_Mt090430 20090702
          Length = 204

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/26 (88%), Positives = 25/26 (96%)

Query: 1   KRVLSDAWALDTAQKPYAWQRLNPEG 26
           KRV+SDAW LDTAQKPYAWQ+LNPEG
Sbjct: 174 KRVVSDAWTLDTAQKPYAWQKLNPEG 199


>IMGA|Medtr1g111020.1 Serine/threonine-specific protein
          phosphatase and bis(5-nucleosyl)-tetraphosphatase
          chr01_pseudomolecule_IMGAG_V3 23521636-23513053 E
          EGN_Mt090430 20090702
          Length = 687

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 23/23 (100%)

Query: 33 MYATASARSDGMFLLCGGRDSSG 55
          +YATASARSDGMFLLCGGRDSSG
Sbjct: 52 LYATASARSDGMFLLCGGRDSSG 74