Jatropha Genome Database

JcCD0054045.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0054045.10 + phase: 1 /TE/partial
         (214 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g133990.1 Octicosapeptide/Phox/Bem1p; Adipokinetic ho...   187   3e-48

>IMGA|Medtr8g133990.1 Octicosapeptide/Phox/Bem1p; Adipokinetic
           hormone; Plant MuDR transposase
           chr08_pseudomolecule_IMGAG_V3 32135080-32138933 E
           EGN_Mt090430 20090702
          Length = 655

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 136/218 (62%), Gaps = 33/218 (15%)

Query: 2   NKDGSLSYRGGDAHAIDIDDQMKFNDFKTEVAEMFNCSINNMSLKYFLPGNRKTLITISN 61
           N DGS+SY GGDA+AIDID +   +DFK+E+AE FNC+++ M++KYFLPGN+KTLIT+S 
Sbjct: 56  NIDGSMSYNGGDAYAIDIDQETSLSDFKSEIAETFNCNVSTMNIKYFLPGNKKTLITVSK 115

Query: 62  DKDLKRMLKFHWDSVTTDIYVILEDIVLPDVSNLPASRSSRTTLSEXXXXXXXXXXXXXX 121
           DKDL+RM+ F  D+ T D++VI E++V  + SN+PASRSSRTT+SE              
Sbjct: 116 DKDLQRMVSFLGDASTVDVFVINEEVVARNTSNMPASRSSRTTVSE----------AVVP 165

Query: 122 XXXXTLQSAIHLTGPLXXXXXXXXXXXXXXEAQLDQ-PLDISPILP----LVDSTDERHA 176
                  +AI                    E  +DQ  +D++   P       + D++  
Sbjct: 166 VVIPINVAAID------------------AEQCIDQVEVDVANEAPAQSLCSGANDDKRQ 207

Query: 177 KGAQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAF 214
           + AQQW+NTITGV QRF+S  EFRE+L KY+IAH FA+
Sbjct: 208 RAAQQWENTITGVDQRFNSFSEFREALHKYSIAHGFAY 245