Jatropha Genome Database

JcCC0332622.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCC0332622.10 - phase: 0 
         (79 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g156860.1 Glutathione peroxidase chr04_pseudomolecule...    56   4e-09
IMGA|Medtr4g149540.1 Thioredoxin fold chr04_pseudomolecule_IMGAG...    55   1e-08
IMGA|Medtr4g149530.1 Thioredoxin fold chr04_pseudomolecule_IMGAG...    54   1e-08
IMGA|Medtr4g149530.2 Glutathione peroxidase chr04_pseudomolecule...    53   4e-08
IMGA|Medtr4g149540.5 Glutathione peroxidase chr04_pseudomolecule...    53   4e-08
IMGA|Medtr4g149540.3 Glutathione peroxidase chr04_pseudomolecule...    53   5e-08
IMGA|Medtr4g149540.2 Glutathione peroxidase chr04_pseudomolecule...    53   5e-08
IMGA|Medtr1g086700.1 Glutathione peroxidase chr01_pseudomolecule...    52   6e-08
IMGA|Medtr5g010450.1 Thioredoxin fold chr05_pseudomolecule_IMGAG...    51   1e-07
IMGA|Medtr1g017000.1 Glutathione peroxidase chr01_pseudomolecule...    46   5e-06

>IMGA|Medtr4g156860.1 Glutathione peroxidase
           chr04_pseudomolecule_IMGAG_V3 38944183-38947614 F
           EGN_Mt090430 20090702
          Length = 167

 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            G  IKWNFTKFL+N+EG+V++RY PTT PL  E
Sbjct: 124 FGDGIKWNFTKFLVNKEGKVVDRYAPTTAPLKIE 157


>IMGA|Medtr4g149540.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
           37204088-37200964 E EGN_Mt090430 20090702
          Length = 244

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 27/33 (81%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  IKWNF+KFL+++ G V++RY PTT+PLS E
Sbjct: 203 GDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIE 235


>IMGA|Medtr4g149530.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
           37199276-37197496 F EGN_Mt090430 20090702
          Length = 181

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 29/35 (82%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFEV 35
            G  I+WNF KFL++++GQV++RY PTT+PLS EV
Sbjct: 129 FGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLEV 163


>IMGA|Medtr4g149530.2 Glutathione peroxidase
           chr04_pseudomolecule_IMGAG_V3 37199276-37197496 F
           EGN_Mt090430 20090702
          Length = 172

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 28/33 (84%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  I+WNF KFL++++GQV++RY PTT+PLS E
Sbjct: 130 GDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLE 162


>IMGA|Medtr4g149540.5 Glutathione peroxidase
           chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
           EGN_Mt090430 20090702
          Length = 196

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 27/33 (81%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  IKWNF+KFL+++ G V++RY PTT+PLS E
Sbjct: 155 GDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIE 187


>IMGA|Medtr4g149540.3 Glutathione peroxidase
           chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
           EGN_Mt090430 20090702
          Length = 211

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 27/33 (81%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  IKWNF+KFL+++ G V++RY PTT+PLS E
Sbjct: 170 GDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIE 202


>IMGA|Medtr4g149540.2 Glutathione peroxidase
           chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
           EGN_Mt090430 20090702
          Length = 212

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 27/33 (81%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  IKWNF+KFL+++ G V++RY PTT+PLS E
Sbjct: 171 GDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIE 203


>IMGA|Medtr1g086700.1 Glutathione peroxidase
          chr01_pseudomolecule_IMGAG_V3 17244005-17243295 E
          EGN_Mt090430 20090702
          Length = 72

 Score = 52.0 bits (123), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 1/35 (2%)

Query: 1  MGSS-IKWNFTKFLINREGQVINRYGPTTNPLSFE 34
          +GS  IKWNFTKFL++ EG+VI RY PTT PL+ E
Sbjct: 27 LGSRRIKWNFTKFLVDEEGRVIQRYSPTTQPLAIE 61


>IMGA|Medtr5g010450.1 Thioredoxin fold chr05_pseudomolecule_IMGAG_V3
           2579001-2576674 E EGN_Mt090430 20090702
          Length = 195

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 26/34 (76%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            G  I+WNF KFLI+++GQV  RY PTT+PLS E
Sbjct: 146 FGDDIQWNFAKFLIDKDGQVAARYYPTTSPLSLE 179


>IMGA|Medtr1g017000.1 Glutathione peroxidase
           chr01_pseudomolecule_IMGAG_V3 3474733-3478915 E
           EGN_Mt090430 20090702
          Length = 236

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            G  +KWNF KFL+++ G+V+ RY PTT+P   E
Sbjct: 194 FGDLVKWNFEKFLVDKNGKVVERYPPTTSPFQIE 227