Jatropha Genome Database

JcCB1005111.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB1005111.20 + phase: 0 
         (68 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g037220.1 Adenine nucleotide translocator 1 chr08_pse...   125   8e-30
IMGA|Medtr2g117590.1 Mitochondrial substrate carrier chr02_pseud...   115   6e-27
IMGA|Medtr4g154910.1 Mitochondrial substrate carrier chr04_pseud...    62   1e-10

>IMGA|Medtr8g037220.1 Adenine nucleotide translocator 1
           chr08_pseudomolecule_IMGAG_V3 8013525-8008899 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 66/68 (97%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS+DAF QILKNEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ+I+ G
Sbjct: 334 MMMTSGEAVKYKSSFDAFQQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLG 393

Query: 61  KKYGSGGA 68
           KKYGSGGA
Sbjct: 394 KKYGSGGA 401


>IMGA|Medtr2g117590.1 Mitochondrial substrate carrier
           chr02_pseudomolecule_IMGAG_V3 27673245-27668971 E
           EGN_Mt090430 20090702
          Length = 362

 Score =  115 bits (288), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 63/68 (92%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS DAFSQI+K EG KSLFKGAGANILRA+AGAGVLA YDKLQ+++ G
Sbjct: 295 MMMTSGEAVKYKSSLDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLMLG 354

Query: 61  KKYGSGGA 68
           KK+GSGGA
Sbjct: 355 KKFGSGGA 362


>IMGA|Medtr4g154910.1 Mitochondrial substrate carrier
           chr04_pseudomolecule_IMGAG_V3 38133982-38135635 F
           EGN_Mt090430 20090702
          Length = 317

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMI 57
           MM+TSG   KY +S  AF +I+  EG  +LF+G  AN+L  +AGAGVLAGYD+L  I
Sbjct: 247 MMLTSGHQNKYYNSMHAFREIVGQEGFLALFRGVTANMLLGMAGAGVLAGYDQLNRI 303