Jatropha Genome Database

JcCB0983611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0983611.10 + phase: 0 /partial/short
         (40 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g016960.1 Nicotinate phosphoribosyltransferase relate...    76   4e-15

>IMGA|Medtr5g016960.1 Nicotinate phosphoribosyltransferase related
           chr05_pseudomolecule_IMGAG_V3 6044602-6051115 E
           EGN_Mt090430 20090702
          Length = 556

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/40 (85%), Positives = 38/40 (95%)

Query: 1   MGIRLDSGDLAYLSGEARKFFRAIEKEFGVPGFGKMSITA 40
           +GIRLDSGDLAYLS E+RKFFR IE+EFG+PGFGKMSITA
Sbjct: 325 VGIRLDSGDLAYLSCESRKFFRCIEEEFGLPGFGKMSITA 364