Jatropha Genome Database

JcCB0969631.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0969631.10 + phase: 1 /partial
         (71 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g141680.1 Zinc finger, RING-type; Cellulose synthase ...   111   9e-26
IMGA|Medtr1g124990.1 Zinc finger, RING-type; Cellulose synthase ...   107   2e-24
IMGA|Medtr3g029130.1 Zinc finger, RING-type; Cellulose synthase ...   107   2e-24
IMGA|Medtr3g136720.1 Zinc finger, RING-type; Cellulose synthase ...   105   4e-24
IMGA|Medtr8g145000.1 Zinc finger, RING-type; Cellulose synthase ...   102   3e-23
IMGA|Medtr8g145000.2 Cellulose synthase chr08_pseudomolecule_IMG...   102   4e-23
IMGA|Medtr3g009020.1 Cellulose synthase chr03_pseudomolecule_IMG...    97   2e-21
IMGA|Medtr4g089800.1 Cellulose synthase chr04_pseudomolecule_IMG...    97   2e-21
IMGA|Medtr4g134990.1 Cellulose synthase chr04_pseudomolecule_IMG...    93   3e-20
IMGA|Medtr8g073590.2 Cellulose synthase chr08_pseudomolecule_IMG...    71   2e-13
IMGA|Medtr8g073590.1 Zinc finger, RING-type; Cellulose synthase ...    70   2e-13
IMGA|Medtr2g104420.1 Cellulose synthase chr02_pseudomolecule_IMG...    60   2e-10
IMGA|Medtr4g107300.1 Cellulose synthase chr04_pseudomolecule_IMG...    59   5e-10
IMGA|Medtr7g132620.1 Cellulose synthase chr07_pseudomolecule_IMG...    59   5e-10
IMGA|Medtr7g132520.1 Cellulose synthase chr07_pseudomolecule_IMG...    59   6e-10
IMGA|Medtr5g029050.1 Cellulose synthase chr05_pseudomolecule_IMG...    59   7e-10
IMGA|Medtr2g104440.1 Cellulose synthase chr02_pseudomolecule_IMG...    59   8e-10
IMGA|Medtr3g124220.1 Cellulose synthase chr03_pseudomolecule_IMG...    52   6e-08
IMGA|Medtr1g047100.1 Zinc finger, RING-type; Cellulose synthase ...    52   6e-08
IMGA|Medtr1g047090.1 Zinc finger, RING-type; Cellulose synthase ...    52   7e-08
IMGA|Medtr2g104470.1 Cellulose synthase chr02_pseudomolecule_IMG...    46   4e-06
IMGA|Medtr2g104490.1 Cellulose synthase chr02_pseudomolecule_IMG...    45   6e-06

>IMGA|Medtr4g141680.1 Zinc finger, RING-type; Cellulose synthase
           chr04_pseudomolecule_IMGAG_V3 35036331-35029774 E
           EGN_Mt090430 20090702
          Length = 1098

 Score =  111 bits (277), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/68 (75%), Positives = 59/68 (86%)

Query: 4   ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWG 63
           E ++ + + K+EK+FGQSPVFVASTLL++GG   G SPASLLKEAI VISCGYEDKTEWG
Sbjct: 725 EKSSNLTQLKMEKRFGQSPVFVASTLLDNGGIPPGVSPASLLKEAIQVISCGYEDKTEWG 784

Query: 64  KEVGWIYG 71
           KEVGWIYG
Sbjct: 785 KEVGWIYG 792


>IMGA|Medtr1g124990.1 Zinc finger, RING-type; Cellulose synthase
           chr01_pseudomolecule_IMGAG_V3 27423658-27418351 E
           EGN_Mt090430 20090702
          Length = 1135

 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 60/71 (84%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           I+ + + ++ + K EK FGQS VF+ASTL+EDGG LK A+ ASLLKEAIHVISCGYEDKT
Sbjct: 761 IDKKKSPLISQLKFEKFFGQSSVFIASTLMEDGGILKAATSASLLKEAIHVISCGYEDKT 820

Query: 61  EWGKEVGWIYG 71
           EWGKEVGWIYG
Sbjct: 821 EWGKEVGWIYG 831


>IMGA|Medtr3g029130.1 Zinc finger, RING-type; Cellulose synthase
           chr03_pseudomolecule_IMGAG_V3 7596650-7605565 E
           EGN_Mt090430 20090702
          Length = 1078

 Score =  107 bits (266), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 59/70 (84%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LE++FGQS VFVASTL+E+GG  + A+P +LLKEAIHVISCGYEDK+E
Sbjct: 704 DDEKSLLMSQMSLERRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSE 763

Query: 62  WGKEVGWIYG 71
           WG E+GWIYG
Sbjct: 764 WGTEIGWIYG 773


>IMGA|Medtr3g136720.1 Zinc finger, RING-type; Cellulose synthase
           chr03_pseudomolecule_IMGAG_V3 34568485-34575037 E
           EGN_Mt090430 20090702
          Length = 1087

 Score =  105 bits (263), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/70 (64%), Positives = 56/70 (80%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQSPVF+A+T +E GG     +  +LLKEAIHVISCGYEDKTE
Sbjct: 712 DDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGLPPSTNSTTLLKEAIHVISCGYEDKTE 771

Query: 62  WGKEVGWIYG 71
           WGKE+GWIYG
Sbjct: 772 WGKEIGWIYG 781


>IMGA|Medtr8g145000.1 Zinc finger, RING-type; Cellulose synthase
           chr08_pseudomolecule_IMGAG_V3 35160848-35155901 E
           EGN_Mt090430 20090702
          Length = 1038

 Score =  102 bits (255), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/71 (64%), Positives = 55/71 (77%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           +ED+   +M +   EKKFGQS +FV S L+E+GG    +SPAS LKEAIHVISCGYEDKT
Sbjct: 663 MEDDKELLMSQMNFEKKFGQSSIFVTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKT 722

Query: 61  EWGKEVGWIYG 71
           EWG E+GWIYG
Sbjct: 723 EWGIELGWIYG 733


>IMGA|Medtr8g145000.2 Cellulose synthase
           chr08_pseudomolecule_IMGAG_V3 35159458-35155901 E
           EGN_Mt090430 20090702
          Length = 475

 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/71 (64%), Positives = 55/71 (77%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           +ED+   +M +   EKKFGQS +FV S L+E+GG    +SPAS LKEAIHVISCGYEDKT
Sbjct: 100 MEDDKELLMSQMNFEKKFGQSSIFVTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKT 159

Query: 61  EWGKEVGWIYG 71
           EWG E+GWIYG
Sbjct: 160 EWGIELGWIYG 170


>IMGA|Medtr3g009020.1 Cellulose synthase
           chr03_pseudomolecule_IMGAG_V3 1240220-1233020 E
           EGN_Mt090430 20090702
          Length = 1048

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)

Query: 2   EDENA-AVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           E+E+  +++   KL KKFG+SP+F+AST L DG +LK    AS L EAIHVISCGYE+KT
Sbjct: 669 ENEDGLSIISSQKLVKKFGESPIFIASTQLVDGETLKHGGIASQLTEAIHVISCGYEEKT 728

Query: 61  EWGKEVGWIYG 71
           EWGKEVGWIYG
Sbjct: 729 EWGKEVGWIYG 739


>IMGA|Medtr4g089800.1 Cellulose synthase
           chr04_pseudomolecule_IMGAG_V3 18805888-18800122 E
           EGN_Mt090430 20090702
          Length = 1039

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 56/66 (84%)

Query: 6   AAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKE 65
           +++M +   EK+FGQSPVF+ASTL+E+GG  +G +  SL+KEAIH ISCGYE+KT+WGKE
Sbjct: 670 SSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKE 729

Query: 66  VGWIYG 71
           +GWIYG
Sbjct: 730 IGWIYG 735


>IMGA|Medtr4g134990.1 Cellulose synthase
           chr04_pseudomolecule_IMGAG_V3 32654448-32648144 E
           EGN_Mt090430 20090702
          Length = 991

 Score = 93.2 bits (230), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSL-KGASPASLLKEAIHVISCGYEDKT 60
           E+E + ++ +   EK FG S VF+ S L+E+GG + + A P+ L+KEAIHVISCGYE+KT
Sbjct: 614 ENERSMLISQMSFEKTFGLSTVFIESALMENGGGVPESADPSMLIKEAIHVISCGYEEKT 673

Query: 61  EWGKEVGWIYG 71
           EWGKE+GWIYG
Sbjct: 674 EWGKEIGWIYG 684


>IMGA|Medtr8g073590.2 Cellulose synthase
           chr08_pseudomolecule_IMGAG_V3 14395604-14400736 E
           EGN_Mt090430 20090702
          Length = 776

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 46/70 (65%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           ++E   +  +   E KFG+S +F+ S+L E+GG    ++   LLKEAIHV+SC YED+T 
Sbjct: 400 DEEKQPLQLDKDTENKFGKSTLFMNSSLTEEGGVDPSSTQEVLLKEAIHVMSCSYEDRTL 459

Query: 62  WGKEVGWIYG 71
           WG EVG  YG
Sbjct: 460 WGYEVGMSYG 469


>IMGA|Medtr8g073590.1 Zinc finger, RING-type; Cellulose synthase
           chr08_pseudomolecule_IMGAG_V3 14394817-14400736 E
           EGN_Mt090430 20090702
          Length = 981

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 46/70 (65%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           ++E   +  +   E KFG+S +F+ S+L E+GG    ++   LLKEAIHV+SC YED+T 
Sbjct: 605 DEEKQPLQLDKDTENKFGKSTLFMNSSLTEEGGVDPSSTQEVLLKEAIHVMSCSYEDRTL 664

Query: 62  WGKEVGWIYG 71
           WG EVG  YG
Sbjct: 665 WGYEVGMSYG 674


>IMGA|Medtr2g104420.1 Cellulose synthase
           chr02_pseudomolecule_IMGAG_V3 24624147-24628359 E
           EGN_Mt090430 20090702
          Length = 740

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVAS-TLLEDGG--SLKGASPASLLKEAIHVISCGYE 57
           I+  N A + EN L ++FG S  FV S T + +G   S  G SP++ ++EAI V  C YE
Sbjct: 374 IQHGNKAKLAENILIQQFGSSKKFVKSATQVMEGNDYSTHGNSPSNFIEEAIKVSDCEYE 433

Query: 58  DKTEWGKEVGWIYG 71
             T WGK++GW+YG
Sbjct: 434 YGTCWGKQMGWLYG 447


>IMGA|Medtr4g107300.1 Cellulose synthase
           chr04_pseudomolecule_IMGAG_V3 23396938-23392391 E
           EGN_Mt090430 20090702
          Length = 1142

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 20/90 (22%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ 41
           +D +   M  ++  KKFG S + + S          L D  ++K   P            
Sbjct: 751 DDSDDEEMNLSQFSKKFGNSNILIDSIPVAQFQGRPLADHPAVKNGRPPGALTIPRELLD 810

Query: 42  ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           AS + EAI VISC YEDKTEWG+ VGWIYG
Sbjct: 811 ASTVAEAISVISCWYEDKTEWGQRVGWIYG 840


>IMGA|Medtr7g132620.1 Cellulose synthase
           chr07_pseudomolecule_IMGAG_V3 30783338-30785920 E
           EGN_Mt090430 20090702
          Length = 636

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 41/79 (51%), Gaps = 21/79 (26%)

Query: 14  LEKKFGQSPVFVAST--------LLED----------GGSLKGASP---ASLLKEAIHVI 52
           L K+FG S    AS         LL+D           GSL G      A+ + EAI VI
Sbjct: 254 LPKRFGNSSYLAASIPVAEFQGRLLQDSKGNGTQGRPAGSLAGPREPLDAATVAEAISVI 313

Query: 53  SCGYEDKTEWGKEVGWIYG 71
           SC YEDKTEWGK VGWIYG
Sbjct: 314 SCYYEDKTEWGKRVGWIYG 332


>IMGA|Medtr7g132520.1 Cellulose synthase
           chr07_pseudomolecule_IMGAG_V3 30684101-30688705 E
           EGN_Mt090430 20090702
          Length = 1171

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 41/79 (51%), Gaps = 21/79 (26%)

Query: 14  LEKKFGQSPVFVAST--------LLED----------GGSLKGASP---ASLLKEAIHVI 52
           L K+FG S    AS         LL+D           GSL G      A+ + EAI VI
Sbjct: 789 LPKRFGNSSYLAASIPVAEFQGRLLQDSKGNGTQGRPAGSLAGPREPLDAATVAEAISVI 848

Query: 53  SCGYEDKTEWGKEVGWIYG 71
           SC YEDKTEWGK VGWIYG
Sbjct: 849 SCYYEDKTEWGKRVGWIYG 867


>IMGA|Medtr5g029050.1 Cellulose synthase
           chr05_pseudomolecule_IMGAG_V3 12063801-12058475 E
           EGN_Mt090430 20090702
          Length = 1121

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 25/90 (27%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLK-GASPASL-------- 44
           E+ ++A++P     KKFG S +FV S          L D  S+K G  P +L        
Sbjct: 735 EELSSALIP-----KKFGNSTLFVDSIRVAEFQGRPLADHPSIKNGRQPGALTLPRDLLD 789

Query: 45  ---LKEAIHVISCGYEDKTEWGKEVGWIYG 71
              + EAI VISC YEDKTEWG  VGWIYG
Sbjct: 790 AATIAEAISVISCWYEDKTEWGDRVGWIYG 819


>IMGA|Medtr2g104440.1 Cellulose synthase
           chr02_pseudomolecule_IMGAG_V3 24632838-24638041 E
           EGN_Mt090430 20090702
          Length = 770

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 9   MPENKLEKKFGQSPVFVAST---LLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKE 65
           + E  L ++FG S  FV S        G S+ G SP++LL +AI V  CGYE  T WGK+
Sbjct: 412 ITEKMLIQQFGSSKEFVKSVTHAFEGSGNSIDGISPSNLLDKAIQVSDCGYEYGTSWGKQ 471

Query: 66  VGWIYG 71
           + W+YG
Sbjct: 472 MCWLYG 477


>IMGA|Medtr3g124220.1 Cellulose synthase
           chr03_pseudomolecule_IMGAG_V3 31422708-31423337 E
           EGN_Mt090430 20090702
          Length = 209

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 22/89 (24%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLK-GASPASL------- 44
           I+DE    M    + KKFG S VFV S          L D  S+K G  P +L       
Sbjct: 107 IDDEE---MSNALIPKKFGNSTVFVDSIRVAEFRGRPLADHPSIKNGRQPGTLTSPRDID 163

Query: 45  ---LKEAIHVISCGYEDKTEWGKEVGWIY 70
              + +AI +I C YEDKTEWG  VGWIY
Sbjct: 164 AATIAKAISIILCWYEDKTEWGNSVGWIY 192


>IMGA|Medtr1g047100.1 Zinc finger, RING-type; Cellulose synthase
           chr01_pseudomolecule_IMGAG_V3 11257297-11261354 H
           EGN_Mt090430 20090702
          Length = 1090

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 8/60 (13%)

Query: 12  NKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           + L  K+G+ P  + S         +    AS + EA+ VISC YE+KTEWG  VGWIYG
Sbjct: 753 DHLSIKYGREPGLLTSP--------RDPLEASTVAEAVSVISCWYEEKTEWGDRVGWIYG 804


>IMGA|Medtr1g047090.1 Zinc finger, RING-type; Cellulose synthase
           chr01_pseudomolecule_IMGAG_V3 11249557-11245984 E
           EGN_Mt090430 20090702
          Length = 969

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 20/83 (24%)

Query: 9   MPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASPASLLK------------EA 48
           +  N L K+FG S +   S          L D  +++   P  +L+            E+
Sbjct: 706 LDSNLLPKRFGNSSMLADSIPVAEFQGRPLADHPNVRYGRPGGVLRKPREPLDAPTVAES 765

Query: 49  IHVISCGYEDKTEWGKEVGWIYG 71
           + VISC YEDKTEWG+ VGWIYG
Sbjct: 766 VSVISCWYEDKTEWGERVGWIYG 788


>IMGA|Medtr2g104470.1 Cellulose synthase
           chr02_pseudomolecule_IMGAG_V3 24642578-24648473 E
           EGN_Mt090430 20090702
          Length = 785

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 12  NKLEKKFGQSPVFV--ASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWI 69
           N++E  FG S  F+  A+  LE     +  +  + L+ A  V SC YE  T WGK+VGWI
Sbjct: 392 NEMEVVFGTSKRFIESATHALEGKTFTRIDNLCNTLETAKKVASCTYEYGTAWGKQVGWI 451

Query: 70  YG 71
           YG
Sbjct: 452 YG 453


>IMGA|Medtr2g104490.1 Cellulose synthase
           chr02_pseudomolecule_IMGAG_V3 24662239-24664735 E
           EGN_Mt090430 20090702
          Length = 500

 Score = 45.4 bits (106), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 32/63 (50%)

Query: 9   MPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGW 68
           + E +  +KFG S  FV S      G       +  L+ A  V SC YE  T WGK+VGW
Sbjct: 144 LSEKETMQKFGTSKGFVESATHILEGITSDLHKSLDLEAASKVASCDYEYNTAWGKQVGW 203

Query: 69  IYG 71
           +YG
Sbjct: 204 LYG 206