Jatropha Genome Database

JcCB0902161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0902161.10 + phase: 0 /partial
         (93 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...   146   3e-36
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...   137   2e-33
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...   111   1e-25
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti...    78   9e-16
IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol...    77   2e-15
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti...    74   2e-14
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    74   3e-14
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol...    64   1e-11
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    56   6e-09
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol...    53   4e-08
IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcripti...    50   3e-07
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti...    49   4e-07
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti...    49   4e-07
IMGA|Medtr5g032500.1 Transcription factor, K-box chr05_pseudomol...    49   7e-07
IMGA|Medtr5g032500.2 Transcription factor, K-box chr05_pseudomol...    49   7e-07
IMGA|Medtr7g083450.1 Transcription factor, K-box chr07_pseudomol...    49   8e-07

>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score =  146 bits (368), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 86/93 (92%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           ME+ILERYERYSYAERQLVA D+E+ G+WT+E+ +LKA++++LQRN RH+MGEDL S+SL
Sbjct: 63  MEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSL 122

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           KELQ+LEQQ+D+ALK IR+R+NQ MYESISELQ
Sbjct: 123 KELQSLEQQLDTALKLIRTRRNQVMYESISELQ 155


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 81/93 (87%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           ME+ILER+ERY YAER LV  DT+T  +WT+E+ +LKA+VE+LQRN RH+MGE+LDS+SL
Sbjct: 63  MEQILERHERYGYAERLLVGNDTDTQENWTMEYTRLKAKVELLQRNHRHYMGEELDSMSL 122

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           KELQ LEQQ+D+ LK+IR+RK Q MYE+ISELQ
Sbjct: 123 KELQCLEQQLDTGLKNIRTRKTQVMYEAISELQ 155


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 72/92 (78%), Gaps = 2/92 (2%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           ME ILERYER ++ E  L     ET G+W+ E+ KL A+V+VL+RN R+F+G DLD LS+
Sbjct: 63  MEDILERYERQNHTE--LTGATNETQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSV 120

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
           KELQ+LEQQ+D++LK IR+RKNQ M +SISEL
Sbjct: 121 KELQSLEQQLDTSLKRIRTRKNQVMNQSISEL 152


>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           36883844-36877638 E EGN_Mt090430 20090702
          Length = 241

 Score = 78.2 bits (191), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 11/99 (11%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLE------HAKLKARVEVLQRNQRHFMGED 54
           M + LERY++ +Y      A +T  +    LE      + KLKAR E LQR+QR+ MGED
Sbjct: 63  MLKTLERYQKCNYG-----APETNVSAREALELSSQQEYLKLKARYEALQRSQRNLMGED 117

Query: 55  LDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           L  LS KEL++LE+Q+DS+LK IRS + Q M + +S+LQ
Sbjct: 118 LGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQ 156


>IMGA|Medtr7g083430.1 Transcription factor, K-box
          chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
          EGN_Mt090430 20090702
          Length = 211

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 3  RILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSLKE 62
          + LERY+R S+  +     + ET  +W  E +KLKA+ E LQ++QR  +GEDL  L++KE
Sbjct: 8  KTLERYQRCSFTSQNDNVNEHETQ-NWYQEMSKLKAKYESLQKSQRQLLGEDLGPLNMKE 66

Query: 63 LQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          LQNLE+Q++ AL   R RK Q M E + EL+
Sbjct: 67 LQNLEKQLEGALAQARQRKTQIMVEQMEELK 97


>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           25812647-25808917 E EGN_Mt090430 20090702
          Length = 246

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 3/96 (3%)

Query: 1   MERILERYERYSYAERQLVATDTET---NGSWTLEHAKLKARVEVLQRNQRHFMGEDLDS 57
           M + LERY++ +Y   +  A   E      S   E+ KLKAR E LQR QR+ MGEDL  
Sbjct: 63  MLKTLERYQKCNYGAPEANAHSKEALVLELSSQQEYLKLKARYESLQRTQRNLMGEDLGP 122

Query: 58  LSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           LS K+L+ LE+Q+DS+LK IRS + Q M + + +LQ
Sbjct: 123 LSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQ 158


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           M + L+RY++ SY   ++     E   S+  E+ KLK R E LQR QR+ +GEDL  LS 
Sbjct: 63  MLKTLDRYQKCSYGAVEVSKPAKELESSYR-EYLKLKQRFENLQRAQRNLLGEDLGPLSS 121

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           K+L+ LE+Q+DS+LK +RS K Q M + +++LQ
Sbjct: 122 KDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQ 154


>IMGA|Medtr5g049080.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
          EGN_Mt090430 20090702
          Length = 128

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 48/62 (77%)

Query: 32 EHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISE 91
          E+ KLK++VE LQ+ QR+ +GE+L+ L + EL+ +E+Q+DS+LK IRS K Q M + +++
Sbjct: 7  EYIKLKSKVEALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKTQHMLDQLTD 66

Query: 92 LQ 93
          LQ
Sbjct: 67 LQ 68


>IMGA|Medtr5g075960.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
          EGN_Mt090430 20090702
          Length = 169

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          M  +++RY +      QL ++ +E    W  E A L+ ++  LQ + R  MGE+L  L++
Sbjct: 6  MRSVIDRYNKTKEEHNQLGSSTSEIK-FWQREAAMLRQQLHNLQESHRQIMGEELSGLTV 64

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
          KELQ LE Q++ +L+ +R +K Q   + I EL
Sbjct: 65 KELQGLENQLEISLRGVRMKKEQLFMDEIQEL 96


>IMGA|Medtr2g010020.1 Transcription factor, K-box
          chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
          EGN_Mt090430 20090702
          Length = 121

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%)

Query: 29 WTLEHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYES 88
          W  E A L+ +++ LQ + R  MGE L  L +KELQNLE Q++ +LK +R +K+  +   
Sbjct: 22 WQTEAATLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTNE 81

Query: 89 ISEL 92
          I EL
Sbjct: 82 IKEL 85


>IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           29094866-29091202 E EGN_Mt090430 20090702
          Length = 239

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 17/101 (16%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAK---------LKARVEVLQRNQRHFM 51
           + +I+E+Y       RQ    +   NG +  EH           L+ + E L R QR+F+
Sbjct: 62  LNKIIEKY-------RQCCFNNMSENG-YLGEHESQGLYQELLMLRVKHESLARTQRNFL 113

Query: 52  GEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
           GE++++LS+K+LQ+LE+Q++  L   R  + Q++ E + EL
Sbjct: 114 GEEINALSIKDLQSLEKQLERTLAQARKHQMQKLMERVDEL 154


>IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           2348300-2341992 E EGN_Mt090430 20090702
          Length = 223

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 42/62 (67%)

Query: 32  EHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISE 91
           E AKL+ ++++LQ + RH MG+ L +L++KEL+ LE +++  +  IRS+K++ +   I  
Sbjct: 93  ESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEY 152

Query: 92  LQ 93
            Q
Sbjct: 153 FQ 154


>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           33294099-33299967 E EGN_Mt090430 20090702
          Length = 251

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 5   LERYERYSYAERQLVATDTETNGSW-TLEHAKLKARVEVLQRNQRHFMGEDLDSLSLKEL 63
           +ERY++ + ++     + +E+N  +   E AKL+ ++  LQ + R  MGE L +++ K+L
Sbjct: 89  IERYKK-ACSDSSGAKSASESNVQYYQQEAAKLRVQISNLQNHNRQMMGESLSNMNGKDL 147

Query: 64  QNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           +NLE +++  +  IRS+KN+ ++  +  +Q
Sbjct: 148 RNLESKLEKGISRIRSKKNEMLFAELEYMQ 177


>IMGA|Medtr5g032500.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
          EGN_Mt090430 20090702
          Length = 183

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          M+ ++ERY      ++Q+   ++E    W  E   L+ +++ LQ N R  MGE L  LS+
Sbjct: 6  MKSVIERY-NICKEDQQVTNPESEVK-FWQREADILRQQLQSLQENHRQLMGEQLYGLSI 63

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
          + LQ+LE Q++ +L+ +R +K + + + I EL
Sbjct: 64 RNLQDLESQLELSLQGVRMKKEKILTDEIQEL 95


>IMGA|Medtr5g032500.2 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
          EGN_Mt090430 20090702
          Length = 169

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          M+ ++ERY      ++Q+   ++E    W  E   L+ +++ LQ N R  MGE L  LS+
Sbjct: 6  MKSVIERY-NICKEDQQVTNPESEVK-FWQREADILRQQLQSLQENHRQLMGEQLYGLSI 63

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
          + LQ+LE Q++ +L+ +R +K + + + I EL
Sbjct: 64 RNLQDLESQLELSLQGVRMKKEKILTDEIQEL 95


>IMGA|Medtr7g083450.1 Transcription factor, K-box
          chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F
          EGN_Mt090430 20090702
          Length = 115

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 38/55 (69%)

Query: 39 RVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          ++E+L+ ++R  MGE L S SL ELQ +EQQ++ ++  +R+RKNQ     I +L+
Sbjct: 3  KIELLEASKRKLMGEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLK 57