Jatropha Genome Database

JcCB0891141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0891141.10 - phase: 1 /partial
         (83 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_...   118   7e-28
IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_...   114   1e-26
IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F EGN_...   114   2e-26
IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F EGN_...   113   2e-26
IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_...    94   1e-20
IMGA|AC233783_2.1 AUX/IAA protein AC233783.1 17994-16063 E EGN_M...    92   6e-20
IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_...    92   8e-20
IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_...    89   4e-19
IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E EGN_M...    87   2e-18
IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_...    85   7e-18
IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_...    85   1e-17
IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_...    84   1e-17
IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_...    62   9e-11
IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_...    60   2e-10
IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_...    53   4e-08
IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_...    50   2e-07

>IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
           16394826-16396206 E EGN_Mt090430 20090702
          Length = 204

 Score =  118 bits (296), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 2/79 (2%)

Query: 1   DQETAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKD 60
           DQ+ APP+KAQVVGWPPIRSYRKN  Q KK   E  G+Y+KVSM GAPYLRKIDLK+YK 
Sbjct: 74  DQDNAPPSKAQVVGWPPIRSYRKNSLQQKK--GEEVGMYLKVSMAGAPYLRKIDLKVYKS 131

Query: 61  YSELLKALEDMFKFEVGKY 79
           YSELLK LE+MFK  +G+Y
Sbjct: 132 YSELLKVLENMFKCTIGEY 150


>IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
           25340896-25342268 F EGN_Mt090430 20090702
          Length = 178

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 4/77 (5%)

Query: 3   ETAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYS 62
           + APP+KA++VGWPPIRSYRKN  Q    EAE SGIYVKVS+DGAPYLRKIDL++Y  Y+
Sbjct: 55  DAAPPSKAKIVGWPPIRSYRKNSLQ----EAEASGIYVKVSLDGAPYLRKIDLRVYGGYA 110

Query: 63  ELLKALEDMFKFEVGKY 79
           +LLKALE MFK  +G Y
Sbjct: 111 QLLKALESMFKLTIGNY 127


>IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F
           EGN_Mt090430 20090702
          Length = 162

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 61/75 (81%), Gaps = 4/75 (5%)

Query: 5   APPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSEL 64
           APPAKA++VGWPPIRSYRKN  Q    EAE  GIYVKVSMDGAPYLRKIDL++Y  Y EL
Sbjct: 61  APPAKAKIVGWPPIRSYRKNTLQ----EAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPEL 116

Query: 65  LKALEDMFKFEVGKY 79
           LKALE MFK  +G+Y
Sbjct: 117 LKALETMFKLTIGEY 131


>IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F
           EGN_Mt090430 20090702
          Length = 186

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 61/75 (81%), Gaps = 4/75 (5%)

Query: 5   APPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSEL 64
           APPAKA++VGWPPIRSYRKN  Q    EAE  GIYVKVSMDGAPYLRKIDL++Y  Y EL
Sbjct: 61  APPAKAKIVGWPPIRSYRKNTLQ----EAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPEL 116

Query: 65  LKALEDMFKFEVGKY 79
           LKALE MFK  +G+Y
Sbjct: 117 LKALETMFKLTIGEY 131


>IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
           29440372-29437665 F EGN_Mt090430 20090702
          Length = 326

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 9/87 (10%)

Query: 1   DQETAPPAKAQVVGWPPIRSYRKNCFQAKKM----EAEGSG----IYVKVSMDGAPYLRK 52
           +   AP AKAQVVGWPPIRS+RKN   +       EAEG      +YVKVSMDGAPYLRK
Sbjct: 162 EHANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYLRK 221

Query: 53  IDLKLYKDYSELLKALEDMFK-FEVGK 78
           +DLK Y +Y EL  ALE MF  F +G+
Sbjct: 222 VDLKTYNNYMELSSALEKMFTCFTIGQ 248


>IMGA|AC233783_2.1 AUX/IAA protein AC233783.1 17994-16063 E
           EGN_Mt090430 20090702
          Length = 193

 Score = 92.0 bits (227), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 8/90 (8%)

Query: 2   QETAPPAKAQVVGWPPIRSYRKNCF--QAKK-----MEAEGSGIYVKVSMDGAPYLRKID 54
           Q +   AK QVVGWPPIRS+RKN    Q++K     +EA+   +YVKVSMDGAPYLRK+D
Sbjct: 92  QISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGCLYVKVSMDGAPYLRKVD 151

Query: 55  LKLYKDYSELLKALEDMFK-FEVGKYYYTL 83
           LK++  Y EL  ALE MF  F + ++++ L
Sbjct: 152 LKIFGTYKELSSALEKMFSCFTISEFFFLL 181


>IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
           27878822-27882652 F EGN_Mt090430 20090702
          Length = 347

 Score = 91.7 bits (226), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 9/84 (10%)

Query: 4   TAPPAKAQVVGWPPIRSYRKNCFQAKKMEAE--------GSGIYVKVSMDGAPYLRKIDL 55
           TAP +KAQVVGWPPIRS+RKN         E        G  ++VKVSMDGAPYLRK+DL
Sbjct: 189 TAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGAVFVKVSMDGAPYLRKVDL 248

Query: 56  KLYKDYSELLKALEDMFK-FEVGK 78
           K Y  YSEL  +LE MF  F +G+
Sbjct: 249 KNYTAYSELSSSLEKMFSCFTIGQ 272


>IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
           25280071-25283234 E EGN_Mt090430 20090702
          Length = 236

 Score = 89.4 bits (220), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 6   PPAKAQVVGWPPIRSYRKNCFQAKKMEAEGS---------GIYVKVSMDGAPYLRKIDLK 56
           PPAKAQVVGWPP+RSYRKN    K    E +           +VKVSMDGAPYLRK+DL 
Sbjct: 78  PPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLT 137

Query: 57  LYKDYSELLKALEDMF-KFEVGKY 79
           +YK Y +L  AL  MF  F  G Y
Sbjct: 138 MYKTYKDLSDALAKMFSSFTTGNY 161


>IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E
           EGN_Mt090430 20090702
          Length = 222

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 8/86 (9%)

Query: 2   QETAPPAKAQVVGWPPIRSYRKNCF--QAKK-----MEAEGSGIYVKVSMDGAPYLRKID 54
           Q +   AK QVVGWPPIRS+RKN    Q++K     +EA+   +YVKVSMDGAPYLRK+D
Sbjct: 92  QISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGCLYVKVSMDGAPYLRKVD 151

Query: 55  LKLYKDYSELLKALEDMFK-FEVGKY 79
           LK++  Y EL  ALE MF  F + ++
Sbjct: 152 LKIFGTYKELSSALEKMFSCFTISQF 177


>IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
           16132304-16127004 E EGN_Mt090430 20090702
          Length = 348

 Score = 85.1 bits (209), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 8/83 (9%)

Query: 4   TAPPAKAQVVGWPPIRSYRKNCFQA---KKMEAEG----SGIYVKVSMDGAPYLRKIDLK 56
           +AP AKAQVVGWPPIRS+RKN          E +G    + ++VKVSMDGAPYLRK+DL+
Sbjct: 188 SAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVDLR 247

Query: 57  LYKDYSELLKALEDMFK-FEVGK 78
            Y  Y EL   LE MF  F +G+
Sbjct: 248 NYTTYQELSSDLEKMFSCFTLGQ 270


>IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
           13000024-12994499 F EGN_Mt090430 20090702
          Length = 335

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 5   APPAKAQVVGWPPIRSYRKNCF----QAKKMEAEG----SGIYVKVSMDGAPYLRKIDLK 56
           AP +KAQVVGWPPIRS+RKN      +    E +G    + ++VKVSMDGAPYLRK+DL+
Sbjct: 175 APASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLR 234

Query: 57  LYKDYSELLKALEDMFK-FEVGK 78
            Y  Y +L  ALE MF  F +G+
Sbjct: 235 TYATYQQLSSALEKMFSCFTLGQ 257


>IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_V3
           40172991-40176335 E EGN_Mt090430 20090702
          Length = 293

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 6/77 (7%)

Query: 2   QETAPPAKAQVVGWPPIRSYRKNCFQAK------KMEAEGSGIYVKVSMDGAPYLRKIDL 55
           Q + P +KAQVVGWPPIRS+RKN   ++        EA+   +YVKVSM+GAPYLRK+DL
Sbjct: 131 QVSPPSSKAQVVGWPPIRSFRKNSMVSQPQKNDADAEAKSECLYVKVSMEGAPYLRKVDL 190

Query: 56  KLYKDYSELLKALEDMF 72
             +  Y EL  ALE MF
Sbjct: 191 NGFSSYRELSSALEKMF 207


>IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
           2999212-2995668 F EGN_Mt090430 20090702
          Length = 271

 Score = 61.6 bits (148), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 22/88 (25%)

Query: 8   AKAQVVGWPPIRSYRKNCFQA----------------------KKMEAEGSGIYVKVSMD 45
           A + VVGWPPIRS+RKN                          K +   G G++VK++MD
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163

Query: 46  GAPYLRKIDLKLYKDYSELLKALEDMFK 73
           G P  RKID+  Y  Y +L  A++D+F+
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLFR 191


>IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
           29123619-29119970 E EGN_Mt090430 20090702
          Length = 269

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 28/97 (28%)

Query: 2   QETAPPAKAQVVGWPPIRSYRKNC----------------------FQAKKMEAE---GS 36
           + TAP     VVGWPPIRS+RKN                         A K   +   G 
Sbjct: 90  KRTAP---GPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGK 146

Query: 37  GIYVKVSMDGAPYLRKIDLKLYKDYSELLKALEDMFK 73
           G++VK++MDG P  RK+DL  Y  Y  L  A++D+F+
Sbjct: 147 GLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFR 183


>IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_V3
           34861254-34858528 E EGN_Mt090430 20090702
          Length = 213

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%)

Query: 8   AKAQVVGWPPIRSYRKNCFQAKKM-----------EAEGSGIYVKVSMDGAPYLRKIDLK 56
            +  +VGWPPI+S+RK  F  +++                 +YVKV+M+G    R+I+L+
Sbjct: 85  GENHLVGWPPIKSWRKKEFHDQQLPEHIRKANENQNRRSKPLYVKVNMEGVGMGRQINLR 144

Query: 57  LYKDYSELLKALEDMF----KFEVGKYYYTL 83
           LY  Y  L  +L  MF     FE     YTL
Sbjct: 145 LYNSYQTLKDSLISMFVKCQNFEETGANYTL 175


>IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
           29935021-29936158 H EGN_Mt090430 20090702
          Length = 198

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 28/34 (82%)

Query: 39  YVKVSMDGAPYLRKIDLKLYKDYSELLKALEDMF 72
           YVKV++DGAPYLRK+DL++Y+ Y  LL AL  MF
Sbjct: 88  YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMF 121