Jatropha Genome Database

JcCB0843131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0843131.10 - phase: 0 /partial
         (230 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   450   e-127

>IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr02_pseudomolecule_IMGAG_V3 28446316-28448239
           E EGN_Mt090430 20090702
          Length = 532

 Score =  450 bits (1157), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 210/230 (91%), Positives = 225/230 (97%)

Query: 1   KISMAQLVQPIANGAFVLSVDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIE 60
           +IS+AQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIE
Sbjct: 263 RISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIE 322

Query: 61  ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFYMCKELGLVDRIPRLVCAQAANANPLYLHY 120
           ILQQFDW+VPDWVIVPGGNLGNIYAFYKGF+MC+ELGLVDRIPRLVCAQAANANPLYL++
Sbjct: 323 ILQQFDWQVPDWVIVPGGNLGNIYAFYKGFHMCRELGLVDRIPRLVCAQAANANPLYLYF 382

Query: 121 KSGWKDFKSIKANNTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADST 180
           KSGWK+FK+++A  TFASAIQIGDPVSIDRAV+ALKN NGIVEEATEEELMDAMAQADST
Sbjct: 383 KSGWKEFKAVRAQTTFASAIQIGDPVSIDRAVHALKNCNGIVEEATEEELMDAMAQADST 442

Query: 181 GMFICPHTGVALTALIKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIEYHS 230
           GMF CPHTGVALTAL KLRNSGVIKPTDRTVVVSTAHGLKFTQSKI+YHS
Sbjct: 443 GMFTCPHTGVALTALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDYHS 492