Jatropha Genome Database

JcCB0836821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0836821.10 + phase: 0 
         (115 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g111560.1 Mitochondrial import inner membrane translo...   158   7e-40
IMGA|Medtr7g111560.2 Mitochondrial import inner membrane translo...    66   4e-12
IMGA|Medtr7g111560.3 Mitochondrial import inner membrane translo...    64   1e-11

>IMGA|Medtr7g111560.1 Mitochondrial import inner membrane
           translocase, subunit Tim17/22
           chr07_pseudomolecule_IMGAG_V3 26249524-26242934 E
           EGN_Mt090430 20090702
          Length = 159

 Score =  158 bits (399), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 88/115 (76%)

Query: 1   MDPSEIRYLEDDDTPIKKTIKGATMGLVAGTIWGTVVATWYDVPRVEKHVALPGLIRTVK 60
           MD  E RY ED+D+ + KT KGAT GLVAGTI GTVVATWYDVPRVE+ VALPGLIRT+K
Sbjct: 1   MDSDERRYFEDEDSSLTKTFKGATTGLVAGTILGTVVATWYDVPRVERSVALPGLIRTLK 60

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFKGEEDS 115
           MMG YGATFAAIGGVYIGVEQ++Q+YRMKRD             +ILG++G   S
Sbjct: 61  MMGGYGATFAAIGGVYIGVEQVLQNYRMKRDLVNGAVGGFVAGATILGYRGRSIS 115


>IMGA|Medtr7g111560.2 Mitochondrial import inner membrane
           translocase, subunit Tim17/22
           chr07_pseudomolecule_IMGAG_V3 26249524-26242934 E
           EGN_Mt090430 20090702
          Length = 99

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 38/55 (69%)

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFKGEEDS 115
           MMG YGATFAAIGGVYIGVEQ++Q+YRMKRD             +ILG++G   S
Sbjct: 1   MMGGYGATFAAIGGVYIGVEQVLQNYRMKRDLVNGAVGGFVAGATILGYRGRSIS 55


>IMGA|Medtr7g111560.3 Mitochondrial import inner membrane
           translocase, subunit Tim17/22
           chr07_pseudomolecule_IMGAG_V3 26249524-26245996 E
           EGN_Mt090430 20090702
          Length = 56

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 37/51 (72%)

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFKG 111
           MMG YGATFAAIGGVYIGVEQ++Q+YRMKRD             +ILG++G
Sbjct: 1   MMGGYGATFAAIGGVYIGVEQVLQNYRMKRDLVNGAVGGFVAGATILGYRG 51