Jatropha Genome Database

JcCB0833551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0833551.10 - phase: 0 /pseudo/partial
         (174 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g068510.1 FAD-dependent glycerol-3-phosphate dehydrog...   144   3e-35

>IMGA|Medtr1g068510.1 FAD-dependent glycerol-3-phosphate
           dehydrogenase chr01_pseudomolecule_IMGAG_V3
           13680218-13674245 E EGN_Mt090430 20090702
          Length = 626

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 64/86 (74%), Positives = 77/86 (89%)

Query: 48  MAEDAVDAAVKSGKLSPTNECSTQNLRLIGGDGWEPSSFTVLAQQYVRMKRSYGGKVVPG 107
           MAEDAVD A+K+GKL+P   C T NLR++GG+GW+P+SFTVL QQY+RMK ++GGKVVPG
Sbjct: 442 MAEDAVDVAIKAGKLTPVGGCVTNNLRIVGGEGWDPASFTVLTQQYLRMKLTHGGKVVPG 501

Query: 108 VMDTAAAKHLSHAYGTMAERVAAIAQ 133
           VMDTA+AKHLSHAYGT+ ERVAAIAQ
Sbjct: 502 VMDTASAKHLSHAYGTLGERVAAIAQ 527