Jatropha Genome Database

JcCB0832121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0832121.10 - phase: 0 /pseudo
         (125 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g121170.1 Nitrilase/cyanide hydratase and apolipoprot...   101   1e-22
IMGA|Medtr4g121180.1 Nitrilase/cyanide hydratase and apolipoprot...    90   2e-19
IMGA|Medtr4g121180.2 Nitrilase/cyanide hydratase and apolipoprot...    54   1e-08

>IMGA|Medtr4g121170.1 Nitrilase/cyanide hydratase and
          apolipoprotein N-acyltransferase
          chr04_pseudomolecule_IMGAG_V3 28306065-28308993 F
          EGN_Mt090430 20090702
          Length = 411

 Score =  101 bits (251), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/67 (65%), Positives = 54/67 (80%)

Query: 18 HISNDGSICGYDSLHHLLCANLKPHLFKEVSRLLLGMNCGKAIETLVLPDSAKVISSKHD 77
          ++SNDGSICGYDSLHHLL  NLKPH F+EV+RLL G+NCGK +ET+ LP+SA  +S KH 
Sbjct: 14 NLSNDGSICGYDSLHHLLKDNLKPHHFQEVNRLLTGLNCGKVLETITLPESATSLSVKHG 73

Query: 78 FDLQVVA 84
          FD Q  +
Sbjct: 74 FDAQAFS 80


>IMGA|Medtr4g121180.1 Nitrilase/cyanide hydratase and
          apolipoprotein N-acyltransferase
          chr04_pseudomolecule_IMGAG_V3 28309856-28312714 E
          EGN_Mt090430 20090702
          Length = 414

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 49/61 (80%)

Query: 22 DGSICGYDSLHHLLCANLKPHLFKEVSRLLLGMNCGKAIETLVLPDSAKVISSKHDFDLQ 81
          DGSICGY+SL HLL  NLKPH F+EV+RLL G+NCGK +ET+ LP+SA  +S +H FDLQ
Sbjct: 20 DGSICGYNSLQHLLKENLKPHHFQEVNRLLTGLNCGKVLETIALPESATALSMEHGFDLQ 79

Query: 82 V 82
           
Sbjct: 80 A 80


>IMGA|Medtr4g121180.2 Nitrilase/cyanide hydratase and
          apolipoprotein N-acyltransferase
          chr04_pseudomolecule_IMGAG_V3 28310847-28312714 E
          EGN_Mt090430 20090702
          Length = 381

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/39 (56%), Positives = 31/39 (79%)

Query: 43 LFKEVSRLLLGMNCGKAIETLVLPDSAKVISSKHDFDLQ 81
          + +EV+RLL G+NCGK +ET+ LP+SA  +S +H FDLQ
Sbjct: 8  VLQEVNRLLTGLNCGKVLETIALPESATALSMEHGFDLQ 46