Jatropha Genome Database

JcCB0827591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0827591.10 - phase: 0 
         (112 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g034580.1 Aminotransferase, class I and II; ; chr05_p...   216   2e-57
IMGA|Medtr5g034580.2 1-aminocyclopropane-1-carboxylate synthase;...   139   4e-34
IMGA|Medtr8g026620.1 Aminotransferase, class I and II; ; chr08_p...   121   1e-28

>IMGA|Medtr5g034580.1 Aminotransferase, class I and II; ;
           chr05_pseudomolecule_IMGAG_V3 14218952-14210868 F
           EGN_Mt090430 20090702
          Length = 481

 Score =  216 bits (551), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 99/112 (88%), Positives = 106/112 (94%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQI+LPPKA+E AK+ GK  DV+YCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIKLPPKALETAKQAGKAADVYYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQKEGVFHLRTTILPAEEEMPAIM SFKKFND+FMEQY+DH GYSR+
Sbjct: 430 PGSGFGQKEGVFHLRTTILPAEEEMPAIMDSFKKFNDDFMEQYDDHRGYSRL 481


>IMGA|Medtr5g034580.2 1-aminocyclopropane-1-carboxylate synthase; ;
           chr05_pseudomolecule_IMGAG_V3 14218952-14210868 F
           EGN_Mt090430 20090702
          Length = 474

 Score =  139 bits (349), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 67/73 (91%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQI+LPPKA+E AK+ GK  DV+YCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIKLPPKALETAKQAGKAADVYYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFH 73
           PGSGFGQKEG  H
Sbjct: 430 PGSGFGQKEGYVH 442


>IMGA|Medtr8g026620.1 Aminotransferase, class I and II; ;
           chr08_pseudomolecule_IMGAG_V3 5771287-5764781 F
           EGN_Mt090430 20090702
          Length = 524

 Score =  121 bits (303), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 71/105 (67%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           + +  N    V CN  EGAMY FP+IRLP KAI+AA+     PD FYC +LL ATGI  V
Sbjct: 420 LEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVV 479

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYED 105
           PGSGFGQ  G +H R TILP E+ +PAI++   +F+ +FM+++ D
Sbjct: 480 PGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHQKFMDEFRD 524