Jatropha Genome Database
- JcCB0815741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0815741.10 + phase: 1 /TE/partial
(554 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 135 6e-32
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 135 7e-32
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 134 9e-32
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 124 1e-28
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 123 2e-28
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 119 3e-27
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 115 8e-26
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 113 2e-25
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 110 1e-24
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 110 2e-24
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 110 2e-24
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 109 4e-24
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 107 1e-23
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 102 4e-22
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 96 5e-20
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 93 3e-19
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 92 6e-19
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 87 3e-17
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 86 3e-17
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 85 9e-17
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 82 5e-16
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 74 2e-13
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 59 5e-09
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 55 8e-08
IMGA|Medtr3g097840.1 hypothetical protein chr03_pseudomolecule_I... 54 1e-07
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YF+T +DD+SR TWI L +TK +V K Q F +E + +K +RTDNG E++
Sbjct: 607 GHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP 666
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
D+ S GI H+ + TPQ NG ER + I+ R++L + LPK FW +V A+
Sbjct: 667 ---DFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAI 723
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIG 541
Y+INR+P+ L + G + ++ +VFGC ++ R+KFD ++ C F+G
Sbjct: 724 YIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLG 783
Query: 542 YRDEEFGYRLWD 553
Y+ G L+D
Sbjct: 784 YKQGIKGAILYD 795
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YF+T +DD+SR TWI L +TK +V K Q F +E + +K +RTDNG E++
Sbjct: 537 GHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP 596
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
D+ S GI H+ + TPQ NG ER + I+ R++L + LPK FW +V A+
Sbjct: 597 ---DFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAI 653
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIG 541
Y+INR+P+ L + G + ++ +VFGC ++ R+KFD ++ C F+G
Sbjct: 654 YIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLG 713
Query: 542 YRDEEFGYRLWD 553
Y+ G L+D
Sbjct: 714 YKQGIKGAILYD 725
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DD +R WI +L+ K + + F +MVER+ +K +R+DNG E++ +
Sbjct: 609 GHKYFLTILDDCTRHVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFMLR 668
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
EF D + GI H+++ TPQ NG ER + I+ R+++ + LPK FW AV AV
Sbjct: 669 EFYD---KKGIIHQRSCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAV 725
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIG 541
YLINR+P+ L+ +V S L+VFGC ++ R KFD K+ C F+G
Sbjct: 726 YLINRIPTKILNNKSSYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLG 785
Query: 542 YRDE 545
++ E
Sbjct: 786 FKSE 789
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DD +R WI LL++K +V H + F A++E + + K +RTDNG E++
Sbjct: 584 GHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFLLH 643
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
+F Y S+ GI H+++ TPQ NG ER + I+ R++L + LP FW A AV
Sbjct: 644 DF--YASK-GILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIG 541
+LINR+P+ L ++ + + +VFGC + + R+K + ++ F+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 542 YRDEEFGYRLWD 553
Y+ G L+D
Sbjct: 761 YKSGFKGSVLYD 772
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DD +R WI LL++K +V H + F A++E + + K +RTDNG E++
Sbjct: 584 GHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFLLH 643
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
+F Y S+ GI H+++ TPQ NG ER + I+ R++L + LP FW A AV
Sbjct: 644 DF--YASK-GILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIG 541
+LINR+P+ L ++ + + +VFGC + + R+K + ++ F+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 542 YRDEEF 547
Y++ F
Sbjct: 761 YKNFYF 766
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DD +R WI LL+TK +V H + F M+E + V K +RTDNG E++
Sbjct: 58 GHKYFLTIVDDHTRFLWIILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFLLH 117
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
EF Y S+ GI H+ + TPQ NG ER + I+ R++L + LP FW A AV
Sbjct: 118 EF--YASK-GILHQSSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 174
Query: 482 YLINRLPSTAL-DFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFI 540
+LINR+ + L +F ++ + +VFGC + + +K + ++ F+
Sbjct: 175 FLINRITTPVLHNFSPYHLLYDSPP-DITTFKVFGCLCYASSLQSHITKLETRARKSVFL 233
Query: 541 GYRDEEFGYRLWD 553
GY+ GY L+D
Sbjct: 234 GYKLGFKGYVLYD 246
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DDFSR W+ LL+ K +V H + F ++ + K +R+DNG E++
Sbjct: 595 GHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEFLIP 654
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
EF Y S+ GI H+K+ TPQ NG ER + I+ R++L + LP FW AV AV
Sbjct: 655 EF--YASK-GIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAV 711
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKS 534
+LIN++P+ ++ + +VFGC F QRSK ++
Sbjct: 712 FLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRA 764
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 101/194 (52%), Gaps = 22/194 (11%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G RYFLT +DD SR WI LL++K +V H + F M+ + V K +R+DNG E++
Sbjct: 567 GHRYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFLLN 626
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
D+ S HGI H+K+ TPQ NG ER + I+ R++L + LP FW A+ AV
Sbjct: 627 ---DFYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAV 683
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQ--RSKFDDKSVPCTF 539
+LINR+P+ L N S H+ F + Q +SK ++ F
Sbjct: 684 FLINRVPTHVL-----------HNQSPYHV------LFHKLPDIQLFKSKLQPRARKSLF 726
Query: 540 IGYRDEEFGYRLWD 553
+GY+ GY L+D
Sbjct: 727 LGYKSGYKGYHLFD 740
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G RYFLT +DD +R W+ LL+TK +V H + F M++ K +RTDNG E++
Sbjct: 532 GHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRTDNGPEFMLP 591
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
F Y S HGI H+K+ TPQ NG ER + I+ R++L + LP FW A++ AV
Sbjct: 592 SF--YAS-HGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAIHHAV 648
Query: 482 YLINRLPSTAL 492
+LINR+P+ L
Sbjct: 649 FLINRVPTPLL 659
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 364 RYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEF 423
RYFLT +DD+SR WI LL++K +V +H + F +++ + + K +R+DNG E++ F
Sbjct: 566 RYFLTILDDYSRYVWIVLLKSKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEFLLHSF 625
Query: 424 RDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYL 483
Y S+ GI H ++ TPQ NG ER + I+ R++L + LP +W A+ A ++
Sbjct: 626 --YASK-GIVHHRSCVETPQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFI 682
Query: 484 INRLPSTAL----DFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTF 539
INR+ S L + +L +I +VFG + R+K ++ F
Sbjct: 683 INRVTSPTLHNKSPYQLLHDTIPAEHI----FKVFGSLCYSTTLHSHRTKLSARARKSVF 738
Query: 540 IGYRDEEFGYRLWD 553
+GY GY L D
Sbjct: 739 LGYTVGFKGYVLLD 752
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 371 DDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEFRDYCSQH 430
+D SR WI LL+TK +V H + F M++ K +RTDNG E++ S H
Sbjct: 582 NDHSRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFMLSTLY---SSH 638
Query: 431 GIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYLINRLPST 490
GI H+K+ TPQ NG ER + I+ R++L + LP +W A+ AV+LINR+P+
Sbjct: 639 GIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVPTP 698
Query: 491 ALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIGYRDEEFGYR 550
L+ V + S +VFGC + + +K ++ FIGY+ G+
Sbjct: 699 TLNNQSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKGFT 758
Query: 551 LWD 553
L+D
Sbjct: 759 LYD 761
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 20/193 (10%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G +YFLT +DD SR WI L+TK V H + F MV+ + V KC+R+DNG E++
Sbjct: 540 GHKYFLTIVDDHSRFLWIISLKTKSGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFLIL 599
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
F + GI H+K+ TPQ NG ER +H I+ R++L + LP +W A+ AV
Sbjct: 600 SFYESL---GILHQKSCVETPQQNGRVERKHHHILNVGRALLYQSKLPASYWSYALLHAV 656
Query: 482 YLINRLPSTALDFDILEKVWTGRNISYS-HLRVFGCNAFMHVRKEQRSKFDDKSVPCTFI 540
+LINR P+ L+ G++ Y+ H + + F K Q S K+V F+
Sbjct: 657 FLINRKPTPLLE---------GQSPYYALHHKFPDIDTF----KNQASTRARKTV---FL 700
Query: 541 GYRDEEFGYRLWD 553
GY+ G+ L D
Sbjct: 701 GYKSGYKGFILLD 713
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 364 RYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEF 423
RYFLT +DD+S WI LL++K +V +H + F ++ + + K +R+DNG E++ F
Sbjct: 558 RYFLTILDDYSIFFWIVLLKSKYEVSQHVKNFINLIHTQYHITPKVVRSDNGPEFLLNSF 617
Query: 424 RDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYL 483
Y S+ GI H K+ TPQ NG ER + I+ R++L + LP +W A+ A+++
Sbjct: 618 --YASK-GIVHHKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPSSYWSYALLHAIFI 674
Query: 484 INRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIGYR 543
INR+ S L ++ G +VFG + + R+K ++ F+GY
Sbjct: 675 INRVTSPTLHNKSPYQLLHGTIPDVQTFKVFGSLCYSTTLQSHRTKLSARARKTVFLGYA 734
Query: 544 DEEFGYRLWD 553
GY L D
Sbjct: 735 VGYKGYVLLD 744
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%)
Query: 438 VPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYLINRLPSTALDFDIL 497
V TPQHNGVAER+N T++E+ R ML L + FW EAVNT YL+NR P T+++ L
Sbjct: 2 VRNTPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTL 61
Query: 498 EKVWTGRNISYSHLRVFGCNAFMHVRK 524
++W G+++ YS+LRVFGC + HV +
Sbjct: 62 YELWPGKSVDYSNLRVFGCTVYYHVNE 88
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 49/190 (25%)
Query: 364 RYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEF 423
+YF+T +DDFS+ TW LL K F + F MVE + +K +R+DNG E+ E
Sbjct: 40 KYFITLVDDFSKSTWTQLLSCKSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNET 99
Query: 424 RDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYL 483
+ GI H+K+ P TPQ NGV ER + I+E R++L + LP +W E
Sbjct: 100 TLFFQSKGIIHQKSCPYTPQQNGVVERKHKFILETARALLFQSKLPVKYWSEF------- 152
Query: 484 INRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIGYR 543
R+KFD K++P F+GY
Sbjct: 153 ------------------------------------------HRTKFDPKTIPHVFVGYP 170
Query: 544 DEEFGYRLWD 553
GY++ +
Sbjct: 171 YATKGYKVLN 180
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 367 LTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEFRDY 426
L +D+ S KT I + ++K+ A + K +R DNG E++ K+F Y
Sbjct: 421 LYLMDNLSLKT-IGFAKQMKGLYKYIPP--AATSALFQITSKTIRIDNGPEFMLKDF--Y 475
Query: 427 CSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYLINR 486
S HGI H K+ TPQ NG ER + I+ VR++L + LP FW AV AV+LINR
Sbjct: 476 AS-HGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSKLPPTFWSYAVLHAVFLINR 534
Query: 487 LPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIGYRDEE 546
+ + L V + S +VFGC + + R+K ++ F+GY+
Sbjct: 535 VSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHRTKLQSRARKSIFLGYQSGY 594
Query: 547 FGYRLWD 553
GY L+D
Sbjct: 595 KGYVLFD 601
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Query: 398 MVERETGVALKCLRTDNGGEYIFKEFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVE 457
M+E + V K +RTDNG E++ EF Y S+ GI H+++ TPQ NG ER + I+
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFLLHEF--YASK-GILHQRSCVETPQQNGRVERKHQHILN 57
Query: 458 RVRSMLKMANLPKPFWGEAVNTAVYLINRLPSTAL-DFDILEKVWTGRNISYSHLRVFGC 516
R++L + LP FW A AV+LINR+P+ L +F ++ + +VFGC
Sbjct: 58 IGRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPP-DITTFKVFGC 116
Query: 517 NAFMHVRKEQRSKFDDKSVPCTFIGYRDEEFGYRLWD 553
+ + R+K + ++ F+GY+ GY L+D
Sbjct: 117 LCYASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYD 153
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 46/196 (23%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G RYFLT +DD SR W L + K +V H Q F +++ + V K +R+DNG ++
Sbjct: 517 GQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFLLS 576
Query: 422 EFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAV 481
F Y SQ GI H+++ TPQHN V
Sbjct: 577 AF--YASQ-GIIHQRSCVETPQHN-----------------------------------V 598
Query: 482 YLINRLPSTALD----FDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPC 537
+LINR+P+ L+ + +L K N +VFGC + + R+K ++
Sbjct: 599 FLINRVPTLVLENKSPYQVLYKTLPDIN----SFKVFGCLCYASTLQSHRTKLQSRARKS 654
Query: 538 TFIGYRDEEFGYRLWD 553
F+GY+ G L+D
Sbjct: 655 VFLGYKSGYKGSFLYD 670
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 39/172 (22%)
Query: 382 LRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEFRDYCSQHGIRHEKTVPGT 441
++ + K+F+Q +A++E + G +K L+ DNG E+ + EF ++C GI V T
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 442 PQHNGVAERINHTIVERVRSMLKMANLPKPFWGEAVNTAVYLINRLPSTALDFDILEKVW 501
PQ N VA+R+N T++ER R ML A L + FWGE
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGE-------------------------- 94
Query: 502 TGRNISYSHLRVFGCNAFMHVRKEQRSKFDDKSVPCTFIGYRDEEFGYRLWD 553
TG FGC + V + K + ++ F+GY D YR+W
Sbjct: 95 TG----------FGCTVYYRVNE---GKLESRAKKRVFVGYGDGVKEYRIWS 133
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 85.1 bits (209), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 362 GSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFK 421
G+RYF+TF+D++S+ W+ L++ K + F++F + E+++G+ LK L T GGEY K
Sbjct: 58 GNRYFITFVDEYSKMLWLYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSK 117
Query: 422 EFRDYCSQHGIRHEKTVPGTP 442
+F YC+ GI HE T P TP
Sbjct: 118 DFESYCTNQGIIHEVTTPYTP 138
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 459 VRSMLKMANLPKPFWGEAVNTAVYLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNA 518
VRSMLK +P FWG AVNTA Y++NR P+ + + E++W+ R S S+L+VFG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 519 FMHVRKEQRSKFDDKSVPCTFIGYRDEEFGYRLWD 553
+ HV +R K +DK+ +GY + YRL D
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGYHNTG-AYRLLD 95
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 361 GGSRYFLTFIDDFSRKTWICLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIF 420
GG+RYF+ FIDD+S TWI +++ + ++ + + F M++ + +K R DN EY
Sbjct: 2 GGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRD 61
Query: 421 KEFRDYCSQHGIRHEKTVPGTPQHNGVAERINHTIVERVRSMLKMANLP 469
+ + S+ G E + P T Q G AER + I++ V +ML A+ P
Sbjct: 62 SKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 12/80 (15%)
Query: 474 GEAVNTAVYLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRSKFDDK 533
GEA++T V+++N PS +L +++ +K+W +NISY HL VFGC ++ K
Sbjct: 110 GEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTYV------------K 157
Query: 534 SVPCTFIGYRDEEFGYRLWD 553
S C F+ Y + YR +D
Sbjct: 158 SQHCMFLCYDLDGADYRFYD 177
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 381 LLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYIFKEFRDYCSQHGIRHEKTVPG 440
L +TK +V K Q F +E + +K +RTDNG E++ D+ S GI H+ +
Sbjct: 2 LCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP---DFYSSKGIEHQTSCVE 58
Query: 441 TPQHNGVAERINHTIVERVRSML 463
TPQ NG ER + I+ R+ML
Sbjct: 59 TPQQNGRVERKHQHILNVARAML 81
>IMGA|Medtr3g097840.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23539798-23540964 E
EGN_Mt090430 20090702
Length = 54
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 477 VNTAVYLINRLPSTALDFDILEKVWTGRNISYSHLRVFGCNAFMHVRKEQRS 528
+ TA+ LIN PS LD D+ +VW G+ Y +LRV GC AF+H+ Q++
Sbjct: 1 MKTAIDLINLTPSILLDGDVRNRVWIGKYACYGYLRVLGCRAFVHIPSPQKT 52