Jatropha Genome Database

JcCB0795791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0795791.10 + phase: 0 /partial
         (217 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g118180.1 Protein prenyltransferase chr02_pseudomolec...   333   3e-92
IMGA|Medtr3g149650.1 Protein prenyltransferase chr03_pseudomolec...    57   6e-09

>IMGA|Medtr2g118180.1 Protein prenyltransferase
           chr02_pseudomolecule_IMGAG_V3 27994084-27997740 E
           EGN_Mt090430 20090702
          Length = 333

 Score =  333 bits (855), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 148/212 (69%), Positives = 185/212 (87%)

Query: 5   HHRRWAAEKLGIDATAKELEFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELNYIRQLL 64
           HHRRW AEKLG++A   ELEFT+KILS+DAK+YHAWSHRQWVLQ LGGWEDELNY  +LL
Sbjct: 119 HHRRWVAEKLGLEARNSELEFTKKILSIDAKHYHAWSHRQWVLQTLGGWEDELNYCSELL 178

Query: 65  EDDVFNNSAWNQRYFVITRSPFLGGLKAMRESEVKYTIEAILANPENESPWRYLRGLYKD 124
            +D+FNNSAWNQRYFVITRSPFLGG+KAMRESEV YTIEAI++ PENES WRYLRGLYKD
Sbjct: 179 AEDIFNNSAWNQRYFVITRSPFLGGIKAMRESEVLYTIEAIISYPENESSWRYLRGLYKD 238

Query: 125 DTESWINDHQVSTVCLKVLSVKTNHIFALSTLLDLLCHGFKAKQEFRDAVDALRASDPDP 184
           +   ++ND QVS+VCLK+L  K+N++FALSTLLDL+C G++  ++FRDA++ALR SD + 
Sbjct: 239 EATLYVNDTQVSSVCLKILRTKSNYLFALSTLLDLICLGYQPNEDFRDAIEALRTSDNEE 298

Query: 185 PEPDLAKAVCSVLERVDPMRVNYWIWRKNKRP 216
            + D+A+ +CS+LE+VDP+RVNYW+WRK++ P
Sbjct: 299 QDSDIARTICSILEQVDPIRVNYWVWRKSRLP 330


>IMGA|Medtr3g149650.1 Protein prenyltransferase
           chr03_pseudomolecule_IMGAG_V3 39190422-39194998 E
           EGN_Mt090430 20090702
          Length = 686

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 7/119 (5%)

Query: 5   HHRRWAAEKLGIDATAKELEFTRKILSLDAKNYHAWSHRQWVLQALG-GWEDELNYIRQL 63
           HHR+W   K G  +   EL         DA+N+HAW++R++V   +    EDEL Y  ++
Sbjct: 107 HHRKWVLSK-GHSSIDNELRLLNDFQKADARNFHAWNYRRFVTALMKISDEDELKYTEKV 165

Query: 64  LEDDVFNNSAWNQRYFVIT-----RSPFLGGLKAMRESEVKYTIEAILANPENESPWRY 117
           +  +  N SAW+ R  +++     ++      + + + E KY   AI  + +++S W Y
Sbjct: 166 IGVNFSNYSAWHNRSVLLSTLFKRKAEGFSHKEKVLQEEYKYVHSAIFTDSDDQSGWFY 224



 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 21  KELEFTRKILSLDAKNYHAWSHRQWVL-QALGGWEDELNYIRQLLEDDVFNNSAWNQRYF 79
           +EL+     L  + K+Y AW HR+WVL +     ++EL  +    + D  N  AWN R F
Sbjct: 87  QELKVVENALKKNFKSYGAWHHRKWVLSKGHSSIDNELRLLNDFQKADARNFHAWNYRRF 146

Query: 80  VITRSPFLGGLKAMRESEVKYTIEAILANPENESPWR----YLRGLYKDDTESWINDHQV 135
           V         +K   E E+KYT + I  N  N S W      L  L+K   E + +  +V
Sbjct: 147 VTAL------MKISDEDELKYTEKVIGVNFSNYSAWHNRSVLLSTLFKRKAEGFSHKEKV 200