Jatropha Genome Database

JcCB0778081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0778081.10 - phase: 0 /partial
         (74 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g076710.1 Isocitrate/isopropylmalate dehydrogenase ch...   115   7e-27
IMGA|Medtr3g148020.1 Isocitrate dehydrogenase NAD-dependent, mit...   113   2e-26
IMGA|Medtr8g088400.2 Isocitrate/isopropylmalate dehydrogenase ch...    77   2e-15
IMGA|Medtr8g088400.1 Isocitrate/isopropylmalate dehydrogenase ch...    77   3e-15
IMGA|Medtr5g023610.1 Isocitrate dehydrogenase NAD-dependent, mit...    70   3e-13

>IMGA|Medtr1g076710.1 Isocitrate/isopropylmalate dehydrogenase
           chr01_pseudomolecule_IMGAG_V3 15387464-15381789 E
           EGN_Mt090430 20090702
          Length = 358

 Score =  115 bits (287), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           +N+ANPTALLLS+V+MLRHL+LHDKADRIQNAIL TIAEGKYRTADLGG S TT+FTKAI
Sbjct: 295 KNLANPTALLLSSVSMLRHLDLHDKADRIQNAILNTIAEGKYRTADLGGSSKTTEFTKAI 354

Query: 71  CDHL 74
            DHL
Sbjct: 355 IDHL 358


>IMGA|Medtr3g148020.1 Isocitrate dehydrogenase NAD-dependent,
           mitochondrial chr03_pseudomolecule_IMGAG_V3
           38483952-38479533 E EGN_Mt090430 20090702
          Length = 353

 Score =  113 bits (283), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           +N+ANPTALLLS+VTMLRHL+LHDKAD IQNAIL TIAEGKYRTADLGG S TT+FTKAI
Sbjct: 290 KNLANPTALLLSSVTMLRHLDLHDKADGIQNAILNTIAEGKYRTADLGGSSKTTEFTKAI 349

Query: 71  CDHL 74
            DHL
Sbjct: 350 IDHL 353


>IMGA|Medtr8g088400.2 Isocitrate/isopropylmalate dehydrogenase
           chr08_pseudomolecule_IMGAG_V3 18715358-18720848 F
           EGN_Mt090430 20090702
          Length = 367

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 45/67 (67%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           V  Q  ANP ALLLS+  MLRHL+    ADR++NA+ K I EGKYRT DLGG S+T +  
Sbjct: 300 VAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVV 359

Query: 68  KAICDHL 74
            A+ D L
Sbjct: 360 DAVIDAL 366


>IMGA|Medtr8g088400.1 Isocitrate/isopropylmalate dehydrogenase
           chr08_pseudomolecule_IMGAG_V3 18715358-18720848 F
           EGN_Mt090430 20090702
          Length = 371

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 45/67 (67%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           V  Q  ANP ALLLS+  MLRHL+    ADR++NA+ K I EGKYRT DLGG S+T +  
Sbjct: 304 VAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVV 363

Query: 68  KAICDHL 74
            A+ D L
Sbjct: 364 DAVIDAL 370


>IMGA|Medtr5g023610.1 Isocitrate dehydrogenase NAD-dependent,
           mitochondrial chr05_pseudomolecule_IMGAG_V3
           9296836-9292742 E EGN_Mt090430 20090702
          Length = 376

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 46/67 (68%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           VV +  ANP ALLLS+  MLRHL+    A+R+++A+ + I EGKYRT DLGG S+T +  
Sbjct: 309 VVQEKKANPVALLLSSAMMLRHLQFPVFAERLESAVKRVILEGKYRTKDLGGTSTTQEVV 368

Query: 68  KAICDHL 74
            A+ D L
Sbjct: 369 DAVIDAL 375