Jatropha Genome Database

JcCB0765881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0765881.10 - phase: 2 /pseudo/partial
         (116 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g095540.1 Peptidase C19, ubiquitin carboxyl-terminal ...   125   6e-30

>IMGA|Medtr2g095540.1 Peptidase C19, ubiquitin carboxyl-terminal
           hydrolase 2; UBA-like chr02_pseudomolecule_IMGAG_V3
           21847655-21841283 E EGN_Mt090430 20090702
          Length = 606

 Score =  125 bits (314), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/65 (83%), Positives = 61/65 (93%)

Query: 25  QTEMTTAERELDQNFNFDWNRIQESGEELEPIFGPGYTGLVNLGNSCYMAATMQVVFSTR 84
           +TEMTTAE+ELDQN NF+WNRIQESG+E+EPIFGPGYTGLVNLGNSCY+AATMQ VFS R
Sbjct: 42  KTEMTTAEKELDQNTNFEWNRIQESGQEVEPIFGPGYTGLVNLGNSCYLAATMQAVFSAR 101

Query: 85  SFCTR 89
           SF +R
Sbjct: 102 SFSSR 106