Jatropha Genome Database

JcCB0763251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0763251.10 + phase: 0 /partial
         (204 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g157420.1 Orn/DAP/Arg decarboxylase 2 chr03_pseudomol...   211   1e-55

>IMGA|Medtr3g157420.1 Orn/DAP/Arg decarboxylase 2
           chr03_pseudomolecule_IMGAG_V3 41516251-41514746 E
           EGN_Mt090430 20090702
          Length = 428

 Score =  211 bits (538), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 109/192 (56%), Positives = 138/192 (71%), Gaps = 3/192 (1%)

Query: 16  LKVISEANRLKGQQVFQIE-KGSLDSLTQSI--SDNQEEAEPFYLIDLGVVIRLMDKWNQ 72
           LK I  A+ +KG +V  +  + ++    QSI  +   E   PF ++DL V+I LM+KW  
Sbjct: 16  LKPIFCASGVKGNKVTTLSSEVTISDFIQSIIKTKPTENDSPFSVLDLRVIIDLMNKWTT 75

Query: 73  SLPNVKPFYAVKCNTEPALLLSLATLGANFDCASQAEIETILGLGVNPDRIMYANPCKSV 132
            LP VKPFYAVKCN   +L+ +LA+LG+NFDCAS+AEIE++L LGV+PD+I+YANPCKS 
Sbjct: 76  ELPTVKPFYAVKCNPNISLIGTLASLGSNFDCASRAEIESVLSLGVSPDKIIYANPCKSE 135

Query: 133 SHIKYAARVGVNLTTFDSKQEVDKIKKWHPKCELLLRLKVPNESSCWRPLGNKYGALTEE 192
           SHIKYAA VGVN+TTFD   EV+KIKKWHPKCELLLR+K   +S     LG KYGAL  E
Sbjct: 136 SHIKYAASVGVNVTTFDCAGEVEKIKKWHPKCELLLRIKPEEDSGARSCLGLKYGALHNE 195

Query: 193 VASLLQHANQAG 204
           V  LL+ A+ AG
Sbjct: 196 VPELLKAADMAG 207