Jatropha Genome Database

JcCB0762681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0762681.10 + phase: 0 /partial
         (107 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPas...    54   1e-08
IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPas...    54   2e-08
IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase chr05_pseudomo...    50   3e-07
IMGA|Medtr6g030660.1 GroEL-like chaperone, ATPase chr06_pseudomo...    45   7e-06

>IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPase
           chr07_pseudomolecule_IMGAG_V3 33258678-33264538 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 14  INEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTGEHDRDNIV-GINL 72
           I+ + +   G+  L +EAF+ ALL +P T+A+N+GLD+ + I  L  EH  +    GI++
Sbjct: 416 IDALARKTPGKKSLAMEAFSRALLAIPTTIADNAGLDSAELISQLRAEHQNEGCTAGIDV 475

Query: 73  QTGGALDPQMEGIFDNYSVKRQIINSG 99
            +G   D    GI + + VK+ ++ S 
Sbjct: 476 ISGSVGDMVERGICEAFKVKQAVLLSA 502


>IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPase
           chr03_pseudomolecule_IMGAG_V3 6286677-6281181 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 14  INEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTGEHDRDNIV-GINL 72
           I+ + +   G+  L +EAF+ ALL +P T+A+N+GLD+ + I  L  EH  +    GI++
Sbjct: 416 IDALARKTPGKKSLAMEAFSRALLAIPTTIADNAGLDSAELISQLRAEHQNEGCTAGIDV 475

Query: 73  QTGGALDPQMEGIFDNYSVKRQIINSG 99
            +G   D    GI + + VK+ ++ S 
Sbjct: 476 ISGSVGDMFERGICEAFKVKQAVLLSA 502


>IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase
           chr05_pseudomolecule_IMGAG_V3 37476659-37485565 E
           EGN_Mt090430 20090702
          Length = 561

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTG 60
           G GA +    +YL  +  +T+ G++QL + ++A AL V+P+ L +N+G D  D +  L  
Sbjct: 411 GGGAIDMEISRYL-RQHARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQ 469

Query: 61  EHDRDN----IVGINLQTGGALDPQMEGIFDNYSVKRQIINSG 99
           +H   +      G+++ TGG  D     +++   VK   IN+ 
Sbjct: 470 KHALPSGEGAPFGVDIATGGIADSFANFVWEPAVVKINAINAA 512


>IMGA|Medtr6g030660.1 GroEL-like chaperone, ATPase
           chr06_pseudomolecule_IMGAG_V3 6790236-6795758 E
           EGN_Mt090430 20090702
          Length = 525

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 23  GRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTGEHDRDNI-VGINLQTGGALDPQ 81
           G  Q  +  FA++  ++P+TLAEN+GL+  + I +L  EH   N  VGI+L+ G   D  
Sbjct: 414 GLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHANGNTKVGIDLEPGVCKDVS 473

Query: 82  MEGIFDNYSVK 92
              ++D +  K
Sbjct: 474 TMRVWDLHVTK 484