Jatropha Genome Database

JcCB0736441.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0736441.10 - phase: 0 /partial
         (270 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA dehydro...   224   5e-59
IMGA|Medtr8g105410.1 Acyl-CoA dehydrogenase C-terminal-like; chr...   168   3e-42
IMGA|Medtr5g013000.1 Acyl-CoA dehydrogenase C-terminal-like chr0...   109   1e-24
IMGA|Medtr5g013010.1 Acyl-CoA dehydrogenase, middle and N-termin...    64   7e-11

>IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA
           dehydrogenase C-terminal-like;
           chr04_pseudomolecule_IMGAG_V3 24329162-24322582 E
           EGN_Mt090430 20090702
          Length = 678

 Score =  224 bits (570), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/244 (47%), Positives = 154/244 (63%), Gaps = 6/244 (2%)

Query: 14  SDMGVHAFIVPIRDINTHQTLPGIEIHDCGHKIGLNGVDNGALRFSSVRIPRDNLLNRFG 73
           S+ GVHAFI  IRD + +   P I I +CGHKIGLNGVDNG + F +VRIPR+NLLN   
Sbjct: 249 SNQGVHAFIAQIRDSDGN-ICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSMA 307

Query: 74  DVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVAVLKLAGTIAIRYSLLRQQFG- 132
           DVS  G+Y S++   ++RFAA L  L  GRV +A SSV + K++  IAIRY+L R+ F  
Sbjct: 308 DVSPSGEYLSAIKNTDQRFAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSI 367

Query: 133 PPKQPEVSILDYQSQQHKLMPMLASTYAFHFAAIHLVEKYSEMKKTHDEQLVGDVHALSA 192
            P  PEV +LDY S Q +L+P+LA  YA  F+AI L + Y       ++     +H +S+
Sbjct: 368 TPNGPEVLLLDYPSHQQRLLPLLAKIYAMSFSAIELKKLYVNRTPESNKA----IHIVSS 423

Query: 193 GLKAYVTSYTAKSLSVCREACGGHGYAAVNRFGTLRNDHDIFQTFEGDNTVLLQQVAGDL 252
             KA  T    ++L  CREACGG G    NR G  + ++D+  TFEGDN VL+QQ++  L
Sbjct: 424 AYKATFTWNNMRTLQECREACGGQGVKTENRIGQFKGEYDVHSTFEGDNNVLMQQISKAL 483

Query: 253 LKQY 256
           L +Y
Sbjct: 484 LAEY 487


>IMGA|Medtr8g105410.1 Acyl-CoA dehydrogenase C-terminal-like;
           chr08_pseudomolecule_IMGAG_V3 23279785-23286851 E
           EGN_Mt090430 20090702
          Length = 664

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 136/247 (55%), Gaps = 11/247 (4%)

Query: 15  DMGVHAFIVPIRDINTHQTLPGIEIHDCGHKIG---LNGVDNGALRFSSVRIPRDNLLNR 71
           D GVH FIV +R ++ H  LPGI + D G K G    N +DNG LRF  VRIPRD +L R
Sbjct: 198 DHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMR 257

Query: 72  FGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVAVLKLAGTIAIRYSLLRQQF 131
              V+R+GKY  S    N       G +V  R  +   +   +  A  IA RYS +R+QF
Sbjct: 258 VSQVTREGKYVQS----NVPRQLVYGTMVYVRQTIVSDASTAMSRAVCIAARYSAVRRQF 313

Query: 132 GPPK-QPEVSILDYQSQQHKLMPMLASTYAFHFAAIHLVEKYSEMKK---THDEQLVGDV 187
           G      E  ++DY++QQ +L P+LAS YAF F    L   Y+++ K    +D   + + 
Sbjct: 314 GGNNGSLESQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYTDVMKRLQANDFSTLPEA 373

Query: 188 HALSAGLKAYVTSYTAKSLSVCREACGGHGYAAVNRFGTLRNDHDIFQTFEGDNTVLLQQ 247
           HA +AGLK+  TS T+  +  CR+ CGGHGY   +    L   +    T+EGDN VLL Q
Sbjct: 374 HACTAGLKSLTTSATSDGIEECRKLCGGHGYLCSSGLPELFAVYVPTCTYEGDNIVLLLQ 433

Query: 248 VAGDLLK 254
           VA  L+K
Sbjct: 434 VARHLMK 440


>IMGA|Medtr5g013000.1 Acyl-CoA dehydrogenase C-terminal-like
           chr05_pseudomolecule_IMGAG_V3 3870425-3866998 E
           EGN_Mt090430 20090702
          Length = 384

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 4/160 (2%)

Query: 99  LVGGRVGLAYSSVAVLKLAGTIAIRYSLLRQQFGPPKQ-PEVSILDYQSQQHKLMPMLAS 157
           +V  R  +   +   L  A  IA RYS +R+QFG  K  PE  ++DY++QQ +L P+LAS
Sbjct: 1   MVYVRQAIVADASTALSRAVCIATRYSAVRRQFGSQKGGPETQVIDYKTQQARLFPLLAS 60

Query: 158 TYAFHFAAIHLVEKYSEMKK---THDEQLVGDVHALSAGLKAYVTSYTAKSLSVCREACG 214
            YAF F +  L   Y+++ +    +D   + + HA +AGLK+  TS TA  +  CR+ CG
Sbjct: 61  AYAFRFVSEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCG 120

Query: 215 GHGYAAVNRFGTLRNDHDIFQTFEGDNTVLLQQVAGDLLK 254
           GHGY   +    L   +    T+EGDNTVLL QVA  L+K
Sbjct: 121 GHGYLCSSGLPELFAVYVPACTYEGDNTVLLLQVARYLVK 160


>IMGA|Medtr5g013010.1 Acyl-CoA dehydrogenase, middle and N-terminal
           chr05_pseudomolecule_IMGAG_V3 3873686-3870432 F
           EGN_Mt090430 20090702
          Length = 257

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 15  DMGVHAFIVPIRDINTHQTLPGIEIHDCGHKIG---LNGVDNGALRFSSVRIPRDNLLNR 71
           D GVH FIV +R ++ H  LPGI + D G K G    N +DNG LRF  VRIPR+ +L R
Sbjct: 198 DQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMR 257