Jatropha Genome Database
- JcCB0713651.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0713651.10 - phase: 0 /TE/partial
(944 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 531 e-151
IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse transc... 334 1e-91
IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse transc... 311 1e-84
IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse transcri... 303 3e-82
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 284 1e-76
IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse transc... 250 2e-66
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 248 1e-65
IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse transc... 232 5e-61
IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse transc... 229 4e-60
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 196 5e-50
IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse transc... 186 7e-47
IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse transcri... 181 2e-45
IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse transcri... 179 7e-45
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 174 2e-43
IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse transc... 170 3e-42
IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse transc... 170 3e-42
IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse transc... 168 1e-41
IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse transc... 167 3e-41
IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse transc... 166 4e-41
IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse transc... 166 4e-41
IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse transc... 166 6e-41
IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase... 162 1e-39
IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse transc... 154 2e-37
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 154 3e-37
IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse transc... 150 3e-36
IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse transc... 149 7e-36
IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putat... 148 1e-35
IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse transc... 147 2e-35
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 145 1e-34
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 140 3e-33
IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase chr04_... 139 9e-33
IMGA|Medtr8g037100.1 hypothetical protein chr08_pseudomolecule_I... 137 2e-32
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 137 3e-32
IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse transc... 135 7e-32
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 134 2e-31
IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse transc... 132 9e-31
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 128 1e-29
IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H... 127 3e-29
IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse transcri... 124 3e-28
IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase... 121 2e-27
IMGA|Medtr8g105650.1 reverse transcriptase, putative; 100033-105... 108 1e-23
IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse transc... 105 1e-22
IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse transc... 104 2e-22
IMGA|Medtr4g013050.1 hypothetical protein chr04_pseudomolecule_I... 97 3e-20
IMGA|Medtr4g012970.1 hypothetical protein chr04_pseudomolecule_I... 97 3e-20
IMGA|Medtr6g061920.1 RNA-directed DNA polymerase (Reverse transc... 97 4e-20
IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse transcrip... 96 6e-20
IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse transc... 95 2e-19
IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse transc... 94 2e-19
IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse transcri... 91 4e-18
IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3 220... 90 6e-18
IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse transc... 89 7e-18
IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase... 89 9e-18
IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V... 89 1e-17
IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putat... 87 3e-17
IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H... 86 8e-17
IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse transc... 84 3e-16
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 83 6e-16
IMGA|Medtr1g117580.1 hypothetical protein chr01_pseudomolecule_I... 83 6e-16
IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse transc... 81 3e-15
IMGA|Medtr6g070340.1 Endonuclease/exonuclease/phosphatase, putat... 80 4e-15
IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial chr... 80 6e-15
IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt0904... 79 1e-14
IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt09043... 79 1e-14
IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750, ... 77 3e-14
IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse transc... 77 4e-14
IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse transc... 77 5e-14
IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase... 76 7e-14
IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse transc... 72 1e-12
IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related chr01_... 72 2e-12
IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse transc... 71 2e-12
IMGA|Medtr4g114300.1 Hemopexin, related, related chr04_pseudomol... 70 4e-12
IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 70 5e-12
IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putat... 70 6e-12
IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H... 70 7e-12
IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-2026... 70 7e-12
IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,... 69 9e-12
IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,... 69 9e-12
IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse transc... 69 1e-11
IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse transc... 69 1e-11
IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H... 67 3e-11
IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse transc... 67 4e-11
IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse transc... 67 5e-11
IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fo... 67 6e-11
IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse transc... 66 8e-11
IMGA|AC233676_33.1 RNA-directed DNA polymerase (reverse transcri... 66 8e-11
IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse transcrip... 65 2e-10
IMGA|AC233571_22.1 hypothetical protein AC233571.2 95791-97088 H... 65 2e-10
IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H... 64 4e-10
IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related chr04_... 64 4e-10
IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse transc... 64 5e-10
IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse transc... 63 6e-10
IMGA|Medtr2g114260.1 hypothetical protein chr02_pseudomolecule_I... 62 1e-09
IMGA|Medtr2g085670.1 Endonuclease/exonuclease/phosphatase chr02_... 62 2e-09
IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, relat... 61 2e-09
IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse transc... 60 4e-09
IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H... 60 4e-09
IMGA|Medtr6g009380.1 hypothetical protein chr06_pseudomolecule_I... 60 5e-09
IMGA|Medtr7g089950.1 hypothetical protein chr07_pseudomolecule_I... 60 6e-09
IMGA|Medtr3g076330.1 RNA-directed DNA polymerase (reverse transc... 60 6e-09
IMGA|Medtr1g008260.1 RNA-directed DNA polymerase, putative chr01... 60 6e-09
IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase... 60 7e-09
IMGA|Medtr2g114250.1 RNA-directed DNA polymerase (reverse transc... 60 7e-09
IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse transc... 59 1e-08
IMGA|Medtr8g133770.1 hypothetical protein chr08_pseudomolecule_I... 59 2e-08
IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative chr01... 58 2e-08
IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse transc... 58 3e-08
IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,... 57 4e-08
IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related chr08_... 57 5e-08
IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,... 57 5e-08
IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 56 6e-08
IMGA|Medtr3g024820.1 RNA-directed DNA polymerase (reverse transc... 56 7e-08
IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase... 56 9e-08
IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse transc... 56 9e-08
IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.... 55 1e-07
IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase... 55 1e-07
IMGA|AC235488_20.1 RNA-directed DNA polymerase (reverse transcri... 55 2e-07
IMGA|AC235488_13.1 RNA-directed DNA polymerase (reverse transcri... 55 2e-07
IMGA|AC235488_29.1 RNA-directed DNA polymerase (reverse transcri... 55 2e-07
IMGA|Medtr8g109700.1 RNA-directed DNA polymerase (Reverse transc... 55 2e-07
IMGA|AC235567_38.1 hypothetical protein AC235567.1 139216-138758... 55 2e-07
IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750, ... 54 3e-07
IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H... 54 3e-07
IMGA|Medtr3g086350.1 N-6 Adenine-specific DNA methylase chr03_ps... 54 3e-07
IMGA|Medtr8g109710.1 reverse transcriptase - beet retrotransposo... 54 4e-07
IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H... 54 4e-07
IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse transc... 54 4e-07
IMGA|Medtr2g056130.1 hypothetical protein chr02_pseudomolecule_I... 54 4e-07
IMGA|Medtr5g022410.1 Leucine-rich repeat chr05_pseudomolecule_IM... 53 6e-07
IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V... 53 7e-07
IMGA|Medtr3g098050.1 RNA-directed DNA polymerase (reverse transc... 52 1e-06
IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 52 1e-06
IMGA|Medtr8g021560.1 hypothetical protein chr08_pseudomolecule_I... 52 2e-06
IMGA|Medtr8g006140.1 Polynucleotidyl transferase, Ribonuclease H... 51 2e-06
IMGA|Medtr8g005870.1 Polynucleotidyl transferase, Ribonuclease H... 51 2e-06
IMGA|Medtr3g138260.1 RNA-directed DNA polymerase (reverse transc... 51 3e-06
IMGA|Medtr5g037770.1 RNA-directed DNA polymerase (Reverse transc... 50 5e-06
IMGA|Medtr8g073360.1 Shikimate kinase; Carbohydrate kinase, ther... 50 5e-06
IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse transc... 50 5e-06
IMGA|Medtr7g018240.1 RNA-directed DNA polymerase (reverse transc... 50 6e-06
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 329/887 (37%), Positives = 482/887 (54%), Gaps = 88/887 (9%)
Query: 1 GWSSMYVNALAKIITAPVSDHAPLFIQLNYQQVDNNYRRFRFDNSWVGERELDQLVKDVW 60
W +M+ L K + SDH+P+ + + D R+FRF+NSW+ E ELD +V D W
Sbjct: 58 SWMTMFPQCLLKNLVTGASDHSPILLCTEQKFYDFKKRQFRFENSWLVEPELDSVVHDGW 117
Query: 61 CNNDSGTLLHKRDVCIKEMEKWGRQFNKIF---WKKKRILKQRIANARDVFDDVTVQRLK 117
++ + ++ + C +E+++WGR K + +K + + + + DV D + LK
Sbjct: 118 FHDVNEPMITRLQHCTEELDQWGRSLRKRYKEDIQKCKDIIEELQGLGDVETDGEIVLLK 177
Query: 118 NEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDN 177
+ N +L +E+ +Q K W+ GD N+K+FHA+ +RK++ KI KL N++ + +
Sbjct: 178 EKLNLLLIQEDTFWKQRAKIFWMKDGDMNAKFFHAAATSRKQKNKITKLFNDEDAVAE-- 235
Query: 178 DSLEQITLNYFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPD 237
LN EE N L APFT +E R+A F MQ D
Sbjct: 236 ------CLN--------EE-----------------DNQFLIAPFTDEEFRDAIFQMQSD 264
Query: 238 KSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KS 297
K+PGPDGLNP F++ FW + G+++ ++WL G P L D +IVL+PKCD ++
Sbjct: 265 KAPGPDGLNPTFYKRFWTLCGEEVVAACRRWLHEGNLPTALGDTNIVLIPKCD---HPRT 321
Query: 298 IDLFRFVMFCIKL*QNL*RIG*KKILPLIIDEC----QCAFVPGRLISDNVAVAFELIHN 353
+ R + C + + L + + L ++D+C Q FV GR I+DN+ +A E+IH
Sbjct: 322 MRDLRPISLCNVVYKILAKTLANR-LQRVLDKCISVEQSGFVAGRTITDNILIALEIIHY 380
Query: 354 IKSRK-NQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLL 412
+K + G ALKIDISK YDRV+W +L +M +MGF W+KWM + VT V Y VL+
Sbjct: 381 LKCKTWGIKGEAALKIDISKTYDRVDWNYLFSIMEKMGFNPIWIKWMRMSVTMVSYHVLV 440
Query: 413 NGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHL 472
N VGPI PGRGLRQGDPLSPYLF+ CA+G+S L + A+R L G+KV + P+++HL
Sbjct: 441 NDDRVGPIYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHL 500
Query: 473 LFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTIL 532
LFADDSF FF+ + E + DIL Y AS Q IN+ KS I+FS N+ +S +L
Sbjct: 501 LFADDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNML 560
Query: 533 NVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQA 592
V+ IG YLGLPS+IG+SKK +F +++DR+ RI S++ LS+A KEVLIKS+ QA
Sbjct: 561 WVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQA 620
Query: 593 IPTYCMSVFKIPLSM*NDAK---NDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGF- 648
IP+YCMSVF +P S+ +D + N + EGR R M + L + +W G
Sbjct: 621 IPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIR----WMSWERLTMRKEWGGMG 676
Query: 649 ----QGSSLF*YGHASEARVASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSI 704
G L G + + D F+++ F +FL A LG PSY WRSI
Sbjct: 677 FRHIHGFDLAMSGKQCWNFLTNPDAMVSRI---FKAKYFTNENFLGASLGHNPSYVWRSI 733
Query: 705 HAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGR 764
++ LK G +WR+G+G T +SH ++ + R
Sbjct: 734 WSSRIFLKTGYQWRIGDGSTTATVSH---------------------------LIDAQTR 766
Query: 765 -WDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 823
W+ + F+LR+ IL IP+ D I+W +DKKG+YSV++ Y V +L R
Sbjct: 767 SWNEPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVKNAYRVCVDVLINRD 826
Query: 824 HEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDI 870
G K+W L PK K FMWR R+ LP ++RL +GV + +
Sbjct: 827 EWKVEGDRNKLWSLPIPPKVKHFMWRLGRDCLPNRQRLNCKGVRLSL 873
>IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
15868030-15871357 E EGN_Mt090430 20090702
Length = 845
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/527 (36%), Positives = 281/527 (53%), Gaps = 75/527 (14%)
Query: 68 LLHKRDVCIKEMEKWGRQFNKIFWKKKRILKQRIANAR----------DVFDDVTVQRLK 117
++ K +VC ++ W + N LKQ I N R D + L+
Sbjct: 3 VVEKLEVCANDLNSWSKAHNNG-------LKQEIDNCRRDLNRCQSQGAAADPSLLTNLR 55
Query: 118 NEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDN 177
++ +E+ RQ K W GD N+K+FHAS +RK+ +I L+N++G + D
Sbjct: 56 KRMTHLMIQEDKYWRQRAKTHWYRDGDLNTKFFHASATSRKKVNRINFLDNDEGVRIADE 115
Query: 178 DSLEQITLNYFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPD 237
+ Q+ YF T++ + N+++ V+ N +LTAPF +E ++A F M PD
Sbjct: 116 QGMSQVAKEYFETLFLESNSTRAPVVNIIEKVVSGDDNIMLTAPFQAEEFKDAMFSMHPD 175
Query: 238 KSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KS 297
K PGPDG NP FFQ W P L ++ L+ K
Sbjct: 176 KCPGPDGFNPGFFQQLW--------------------PIALCNVLYKLVAK--------- 206
Query: 298 IDLFRFVMFCIKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIK-S 356
+ +L KKIL I E Q AFVP R I DN +A E++H++K
Sbjct: 207 -------VLANRL---------KKILHKCISESQSAFVPERSILDNAMIAIEVVHHMKVG 250
Query: 357 RKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKE 416
++ + ALK+DISKAYDR++W +L+ +ML+MGF KWV+ +M+CV V YSV++N +
Sbjct: 251 KRVRDKNVALKLDISKAYDRIDWLYLKEVMLKMGFDSKWVQQIMMCVETVDYSVIVNNE- 309
Query: 417 VGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFAD 476
GDPLSPYLF+ C +GLS L + A+R G L G+ + N P+I+HLLFAD
Sbjct: 310 -----------LGDPLSPYLFILCDEGLSALIRKAERSGDLHGVSICTNAPTISHLLFAD 358
Query: 477 DSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTILNVAG 536
D F FFK EA+ + +IL YE ASGQ I+L K +FFS + L I+ IL V
Sbjct: 359 DCFLFFKVDDNEAQVMKNILHTYELASGQTISLPKYEVFFSTVVPLPLKETITNILGVRA 418
Query: 537 SIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKE 583
+G G YLGLPS++G+SK+ FGF++DR+ +I +WS++ LS+ +E
Sbjct: 419 VMGTGKYLGLPSMVGRSKEATFGFIKDRIWHKINSWSSKCLSKVGRE 465
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
F+++ FP DF+ + +G PSY WRSI +A V+KQG RWR+G+G I L PW+
Sbjct: 481 FKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGARWRIGSGVNIPFLGAPWL--KD 538
Query: 738 SFWVEDSRDFVDPNMKVREL-FVEGEGR-WDVGKVMTLFSLREFRAILGIPISINANRDQ 795
++ + +P M+V+ F+E + + W + +LF + IL P+ D+
Sbjct: 539 GLFLSTTNPIFEPLMQVKLCDFIEQDVKMWKAPLIHSLFDAQTAELILNTPLQPLVLEDK 598
Query: 796 IMWHWDKKG 804
++W +K G
Sbjct: 599 MIWKGEKSG 607
>IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
34193929-34195112 H EGN_Mt090430 20090702
Length = 373
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 236/388 (60%), Gaps = 29/388 (7%)
Query: 187 YFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLN 246
YF ++ A++ + N++ ++ N+ LT PF ++E +EA F MQ +K PGPDG N
Sbjct: 8 YFDELFRAKQSTRDPVINVINKVISEEDNHQLTTPFLIEEFKEAMFSMQAEKCPGPDGFN 67
Query: 247 PAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KSIDLFRFVMF 306
P F+Q+FW + DI+R+ WL++G P +L +I L+PK +++ +R +
Sbjct: 68 PGFYQHFWQLCSPDIFRECCSWLESGQLPASLNSTNIALIPKGS---EQRTMKDWRPIAL 124
Query: 307 C---IKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSR-KNQGG 362
C K+ + KKIL I + Q AFVPGR I DN VA E++H +KS+ K + G
Sbjct: 125 CDVFYKVVSKVLANRLKKILHKCILDNQSAFVPGRPILDNAMVAIEVVHYMKSKTKGKKG 184
Query: 363 ACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVG-PIR 421
ALK+DISKAYDR++W +L+ +M++MGF +WV W+M+C+ V YSVL+N K VG PI
Sbjct: 185 NVALKLDISKAYDRIDWLYLKEVMIKMGFCHRWVNWIMMCIETVDYSVLVNQKLVGPPII 244
Query: 422 PGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFF 481
PGRGL+QGDPLSPYLF+ C +GLS L + A+ RG L G KV
Sbjct: 245 PGRGLQQGDPLSPYLFILCVEGLSALIRQAEARGELHGAKVSTE---------------- 288
Query: 482 FKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGG 541
EA + IL YE ASGQAI+L KS I++S N ++ NI++IL V +G
Sbjct: 289 -----TEAHTMKTILAIYEVASGQAISLPKSEIYYSRNTGADVQNNITSILGVQAVLGTS 343
Query: 542 TYLGLPSLIGKSKKQVFGFLQDRLEKRI 569
YLGLPS+IG+SKK F F++DR+ ++I
Sbjct: 344 KYLGLPSMIGRSKKSTFNFIKDRVWQKI 371
>IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse
transcriptase); Endonuclease/exonuclease/phosphatase
AC233655.2 202219-200303 H EGN_Mt090430 20090702
Length = 567
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 259/480 (53%), Gaps = 56/480 (11%)
Query: 2 WSSMYVNALAKIITAPVSDHAPLFIQLNYQQVDNNYRRFRFDNSWVGERELDQLVKDVWC 61
W SM+ + + + SDH+P+ + + + + R+FRF+N+W+ E EL +V D W
Sbjct: 141 WMSMFPQCILHNLISGASDHSPILLNTDPKVYEYKRRQFRFENAWLVEPELPSIVSDGWM 200
Query: 62 NNDSGTLLHKRDVCIKEMEKWGRQFNKIFWKKKRILKQRIANARDVFD---DVTVQRLKN 118
+ LL + +C +E+++WGR + + + + K+RIA + + + D+ V LK
Sbjct: 201 RGQADPLLDRLALCTEELDQWGRSLRRRYKEDIKKCKKRIAELQTLSNNEADIEVVSLKE 260
Query: 119 EWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDND 178
N +L +EE +Q K WL GD NSK+FHA+ +RK+R KI KL +D V +
Sbjct: 261 RLNLLLIQEETFWKQRAKSFWLRDGDMNSKFFHAAATSRKQRNKITKLMKDDNTKVTTQE 320
Query: 179 SLEQITLNYFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDK 238
+ ++L YFS +++ + V P + A NN+LT PF DE R+ F M DK
Sbjct: 321 DICTLSLEYFSNLFAPTPCNTHPVLQAVAPCINAEDNNLLTTPFRDDEFRDVVFQMHSDK 380
Query: 239 SPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KSI 298
+PG DGLNPAF++ F + G ++ + KQWL+ G P L + +IVL+PKC+ +++
Sbjct: 381 APGSDGLNPAFYKRFSALCGGEVIKACKQWLNLGYLPTALGETNIVLIPKCE---HPRTM 437
Query: 299 DLFRFVMFCIKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSRK 358
R + C V ++++
Sbjct: 438 KDLRPISLC-------------------------------------NVVYKML------- 453
Query: 359 NQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVG 418
A AL + +A D+ +E+L ++ +MGF W+ WM +CVT+VKY +L+N + VG
Sbjct: 454 ----AKALANRLQRALDK--FEYLFSILEKMGFNSVWINWMHMCVTNVKYHILVNDEIVG 507
Query: 419 PIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDS 478
P+ PGRGLRQGDPLSPYLF+ CA G++ L + A+R L G+KV P+I+HLLFADDS
Sbjct: 508 PVIPGRGLRQGDPLSPYLFILCAGGMTSLIKQAERNNILHGIKVCCIAPAISHLLFADDS 567
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 227/377 (60%), Gaps = 28/377 (7%)
Query: 232 FDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDI 291
+ M PDK GPDG NP FFQ FW V DI+ + WL+ FP +L +I L+PK +
Sbjct: 2 YSMHPDKCLGPDGFNPGFFQKFWSVCNSDIFSECCSWLNNNQFPPSLNSTNIALIPKGN- 60
Query: 292 LCR*KSIDLFRFVMFC---IKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAF 348
++ +R + C KL + K IL + + Q AFVPGR I DN +A
Sbjct: 61 --EQHNMKDWRPIALCNVLYKLVAKVLANRLKNILHKCVSDNQSAFVPGRSILDNAMIAI 118
Query: 349 ELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVK 407
E+IH++K S++ + ALK+DISKAYDR++W +L+ +++++G+ +W++W+M+CV V
Sbjct: 119 EVIHHMKISKRLRDKNVALKLDISKAYDRIDWLYLKEVVIKIGYANRWIRWIMMCVESVD 178
Query: 408 YSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCP 467
YSV++N + VGPI PG GLRQGDPLSPYLF+ CA+GLS L A+RRG + G+ + N P
Sbjct: 179 YSVIVNNESVGPIFPGEGLRQGDPLSPYLFILCAEGLSALIHQAERRGDIHGISICTNSP 238
Query: 468 SITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTN 527
I+HLLFA+D F FF +E + +IL+ YE+A L K F NM ++
Sbjct: 239 IISHLLFANDCFLFFMAEEREVGVMKNILETYEKAL-----LVKQLAF--RNMKFIIVGV 291
Query: 528 ISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIK 587
T+L L LPSL+ ++ DR+ +I WS++ LS+A +EVL+K
Sbjct: 292 FPTLLKT---------LSLPSLVSALLWEL-----DRIWHKINCWSSKCLSKAEREVLMK 337
Query: 588 SITQAIPTYCMSVFKIP 604
S+ Q+IP+Y MSV+ +P
Sbjct: 338 SVLQSIPSYIMSVYLLP 354
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 37/185 (20%)
Query: 714 GVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTL 773
GVRWR+G G +I + W+ S + ++KV+++
Sbjct: 411 GVRWRIGYGASIPLFGASWLKDGCSLSTQSPLYASLAHVKVQDI---------------- 454
Query: 774 FSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGK 833
I S A +K G YSVRS Y + + H G W
Sbjct: 455 -----------IEPSTKA---------EKNGSYSVRSAYRIYVTKIADNSHLHVPGKWSS 494
Query: 834 MWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAK 892
+W L PK ++F+W R PT+ RL RG+ CG ED H ++ A
Sbjct: 495 IWKLKFPPKIRNFVWPVCRGCFPTRARLSSRGIHCPNDFVLCGTNYEDSIHVLLEYPGAM 554
Query: 893 GVWRQ 897
VWR+
Sbjct: 555 QVWRE 559
>IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse
transcriptase); Histone H2B; Histone-fold;
Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 17931605-17934389 E
EGN_Mt090430 20090702
Length = 802
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 273/589 (46%), Gaps = 70/589 (11%)
Query: 389 MGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLF 448
MGF VK +M CVT V +SVL+ GK P RGLRQGDPLSPYLF+ CA+ LS L
Sbjct: 1 MGFPPNLVKTIMNCVTTVSFSVLIIGKPSNKFYPQRGLRQGDPLSPYLFILCAEVLSGLL 60
Query: 449 QDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAIN 508
G+ G+++ P I+HL FADDS FF + +EA + D L+ Y+ SGQ +N
Sbjct: 61 TKGLADGKFHGIQIAPTAPPISHLFFADDSLFFCRSEPKEANFLMDTLQLYQDMSGQKVN 120
Query: 509 LNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKR 568
L+KS + F+P++ ++ + L + S YLGLP+ G+SK Q F ++ D++ K+
Sbjct: 121 LDKSKMVFNPSLREDIKKDFQVQLPINISNKITKYLGLPTQFGRSKVQDFNYIMDKVIKK 180
Query: 569 IGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*ND------------------ 610
+ W R LS A + VLIK++ QAI + MS F +P ++
Sbjct: 181 MKGWKERNLSFAGRSVLIKAVVQAIHVFVMSCFLLPQETCDNIERAVCKFWWGSNGDNKK 240
Query: 611 ---AKNDE---QVMVGGEGRRA*RD-SLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEAR 663
K D+ + GG G R RD ++V + + + W H ++
Sbjct: 241 IHWVKKDKVLRSTIDGGLGFRNLRDFNMVMLAKQI------W----------RLHTNQQA 284
Query: 664 VASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGE 723
+ S F+++ +P D L A +G PSYAWRS H AI +L +G +VGNG
Sbjct: 285 LISK---------VFKAKYYPTTDVLQATVGYAPSYAWRSFHQAIWILNKGCCMKVGNGA 335
Query: 724 TIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRW--DVGKVMTLFSLREFRA 781
+I + W+ F V VD +V++L ++ RW D+ + + LF L+E
Sbjct: 336 SIDIWKDQWLHNQIGFKVLTHNPGVDNVERVQDLIIDNPQRWNKDLIEHIFLFFLKE--- 392
Query: 782 ILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASP 841
P+ + G + R L R + K+W LD P
Sbjct: 393 ----PLFNKSLLPSTKARTLSCGCIMNLENTLLKRATLLSRFGRPNK---TKIWSLDTIP 445
Query: 842 KDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGY 900
+ + +WR + LP +E L +RG+ + CP C E E I+H + C ++ G
Sbjct: 446 RHRVLLWRIINKALPVREELHKRGINCSLLCPRCEEGIETIDHLFLNCDCSRR--ELFGS 503
Query: 901 EVG-----DINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
+G + F N+ + + DK + IW ARN ++
Sbjct: 504 NLGINFQSNTTADFVNWLISFIYTNDKPPIINLAALLYSIWHARNQKVF 552
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 258/545 (47%), Gaps = 88/545 (16%)
Query: 417 VGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFAD 476
VGPI PGRGLRQGDPLSPYLF+ +GLS L RG + G+KV R P ++HLLFAD
Sbjct: 4 VGPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFAD 63
Query: 477 DSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTILNVAG 536
+ F F + ++ EA+ + ILK YE ASGQ INL+KS +FFS NMS ++S I+ V
Sbjct: 64 NCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRH 123
Query: 537 SIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTY 596
+G G YLGLPS+I + K VF F++D + KRI W R LS+A KEV+IKS+ Q+IP+Y
Sbjct: 124 VMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSY 183
Query: 597 CMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKW--YGFQGSSLF 654
MS++ +P S+ +D ++ V G R+ + M + + ++ GF+ F
Sbjct: 184 IMSIYLLPSSVIDDI--EKMVNAFWWGGRSNNRGIKWMAWEHMACPKEFGGMGFRNFKAF 241
Query: 655 *YGHASEARVASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQG 714
++ + F+S+ FP FL A L
Sbjct: 242 NIAMVAKQGWSLLSTPESLVARVFKSRYFPRSSFLGAKL--------------------- 280
Query: 715 VRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLF 774
VGNG+ + V++ PW+ ++ + + V +L + + WDV K+ +LF
Sbjct: 281 ----VGNGQQVSVMNDPWVRGVQGSCIQSPQSQGVHILSVSDLIADEDRVWDVDKIESLF 336
Query: 775 SLREFRAILGIPISINANRDQIMWH-------------------WDK------------- 802
+AIL P+ + D+I W WD
Sbjct: 337 PDDMVQAILDTPLFAEVHNDRITWMVECNGSCYILIGSMLKKSVWDVDKIESLFPDDMVQ 396
Query: 803 ----------------------KGIYSVRSGYYVA--RRLLRGRVHEIDGGWWGKMWCLD 838
G Y++ +GY +A L R H + W ++W ++
Sbjct: 397 AILDTPLFAEVHNDRITWMVECNGRYTINTGYKIAMMELLHTDRFHVEEE--WKRIWKVN 454
Query: 839 ASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGE-EEDINHAIVLCSKAKGVWRQ 897
+ K ++ +WR R +PT+ RL+ R V+ ++ CP C ED HA V C+ A W
Sbjct: 455 SHHKARNLLWRICRGCVPTRLRLQSRHVQCEVICPSCDTVVEDDWHAFVGCTVACESWYW 514
Query: 898 GGYEV 902
G +
Sbjct: 515 AGLSI 519
>IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
11971058-11973594 E EGN_Mt090430 20090702
Length = 628
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 263/512 (51%), Gaps = 41/512 (8%)
Query: 97 LKQRIANARDVFDDVTVQR-LKNEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIK 155
+++RI N R + ++R L+ E + I +EE Q + +WL GD+N++Y+H
Sbjct: 108 IQRRIRNGRGHSGLMRLKRKLQKEMSRIFQQEELMWFQRSRAKWLVDGDRNTRYYHLKTV 167
Query: 156 NRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE*VGIEIF--NLVQPKVTAI 213
R+RR KI+ L N DG V+ + ++ + Y+ +++ E F +L P++
Sbjct: 168 QRRRRNKIIMLRNVDGHWVEIVEEVKDMVNKYYYELFTTNVDTS-EWFQTSLAFPRLDLE 226
Query: 214 QNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQ-WLDTG 272
IL P +EIR A F M P K+PGPDG F+Q W +IG + K+ W
Sbjct: 227 TLEILRHPLVDEEIRSAVFSMTPWKAPGPDGFPAGFYQKSWSIIGKNTCDFIKKLWCS-- 284
Query: 273 TFPKTLTDIH---IVLLPKCDILCR*KSIDLFRFVMFCIKL*QNL*RI---G*KKILPLI 326
P+ L +I+ I L+PK + ++ FR + C + + L ++ K + I
Sbjct: 285 --PEQLAEINSTNICLIPKVQDP---QFVNQFRPISLCNTVYKILSKVIVNRLKNCVAEI 339
Query: 327 IDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISKAYDRVNWEFLRGMM 386
+ Q F+PGR I +N+ VA E+IH C + + YD ++W F+ +
Sbjct: 340 VSPFQTGFIPGRSIHENIVVAQEMIH-----------CGSR----QTYDNLSWNFIHMTL 384
Query: 387 LRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSL 446
L +G + + +M VT V+ +V NG P +GLRQGDP+SPYLF+ C LS
Sbjct: 385 LEVGLPMEMINVIMHSVTTVRTNVRWNGNRADFFTPKKGLRQGDPISPYLFVICMDKLSH 444
Query: 447 LFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQA 506
L +A +G +K GR P I+HL+FADD F + + + V ++L K+ GQ+
Sbjct: 445 LISEAIDKGDWLDLKTGRTGPMISHLMFADDLLLFGQATDSQMRGVMEVLNKFCHLLGQS 504
Query: 507 INLNKSSIFFSPN---MSRELMTNISTILNVAGSIGGGTYLGLPSLIGKS-KKQVFGFLQ 562
I++ K++IFFS N ++R L+ +IS G YLG+P L GK+ +++ F +L
Sbjct: 505 ISIQKTTIFFSSNVYRVTRRLLVDISGFRETTEL---GKYLGVP-LTGKAPRRKDFQYLV 560
Query: 563 DRLEKRIGNWSNRFLSRARKEVLIKSITQAIP 594
+ + ++ W + S A + L KS+ +AIP
Sbjct: 561 NEVRNKLTAWKSNQFSFAGRVTLAKSVIEAIP 592
>IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
5513052-5515983 E EGN_Mt090430 20090702
Length = 591
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 186/348 (53%), Gaps = 47/348 (13%)
Query: 215 NNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTF 274
N +LT+P T +E+R A F M PDKSP PDG NPAF+Q FWHV GDDI++ WLD G F
Sbjct: 4 NTMLTSPVTKEELRRALFQMHPDKSPSPDGFNPAFYQRFWHVCGDDIFQAVVSWLDRGYF 63
Query: 275 PKTLTDIHIVLLPKCDILCR*KSIDLFRFVMFCIKL*QNL*RIG*KKILPLIIDECQCAF 334
P LT +I L+ KC+ K + K+ L K+ L + E Q AF
Sbjct: 64 PTNLTKTNICLILKCEDPDNMKDLRPISLCNVLYKMVSKLLANRLKRCLDKCVSEEQSAF 123
Query: 335 VPGRLISDNVAVAFELIHNIKSRKNQG--GACALKIDISKAYDRVNWEFLRGMMLRMGFY 392
V GR I DN + E+IH++K RK +G G ALKIDI+KAYD+V W FLRG+++RMGF
Sbjct: 124 VEGRSILDNALITTEIIHSMK-RKTKGWRGELALKIDINKAYDKVGWGFLRGVLMRMGFN 182
Query: 393 EKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAK 452
EKW++WMM+C GDPLSPYLF+ +GLS L A
Sbjct: 183 EKWIQWMMMC--------------------------GDPLSPYLFILVDEGLSTLIHKAV 216
Query: 453 RRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKS 512
RG + G++V R P ++HLLFADD F F + + V+ I K+ G+A++
Sbjct: 217 NRGDIHGIQVCRGAPVVSHLLFADDYFLFCRAN------VDRIWKRINAWRGRALS---- 266
Query: 513 SIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGF 560
+E+M I ++L S YL S+I +K + F
Sbjct: 267 ------KAGKEVM--IKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAF 306
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 155/391 (39%), Gaps = 77/391 (19%)
Query: 563 DRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGE 622
DR+ KRI W R LS+A KEV+IKS+ Q+IP+Y MS++ +P S+ +D ++ +
Sbjct: 251 DRIWKRINAWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLMPSSVIDDI--EKMINAFWW 308
Query: 623 GRRA*RDSLVSMGEDVL*QKGKW--YGFQGSSLF*YGHASEARVASYDGARYSFF*TFQS 680
G R+ + M + + ++ GF F ++ + F++
Sbjct: 309 GGRSNNRGIKWMAWERMACPKEFGGMGFMNFKAFNIAMVAKQGWSFLSKLESLVARVFEA 368
Query: 681 QIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFW 740
+ FP FL A LG S+AWRSI + +L G RW VGNG+ + V++ PW+
Sbjct: 369 RYFPRSSFLGAKLGNNLSFAWRSIWNSRQILLHGCRWTVGNGQQVSVMNDPWV------- 421
Query: 741 VEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHW 800
R D ++V IL P+ D+I W
Sbjct: 422 ----RGVQDDMVQV---------------------------ILDTPLFAEVQNDRITWMM 450
Query: 801 DKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKER 860
++ Y V++ Y +A L R++ C D W+ + V+
Sbjct: 451 ERNRRYIVKTDYKLAMMELLWRIY-----------CQDCYKLAIKGAWQRIWKVI----- 494
Query: 861 LRRRGVEVDIGCPWCGE-EEDINHAIVLCSKAKGVWRQGGYE------VGDINISFTNFF 913
CPWC ED +A V C+ A+ W G VG ++ S +F
Sbjct: 495 -----------CPWCDTIVEDDWNAFVGCTVARESWYWAGLSTVRQPRVGTVS-SLADFI 542
Query: 914 L*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
+ + + IW A N+ +W
Sbjct: 543 FDICRSESRDIVGRVALLLWQIWAACNDTIW 573
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 210/450 (46%), Gaps = 45/450 (10%)
Query: 408 YSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCP 467
+S+L+NG +P RG+RQGDPLSPYLF+ CA LS L +L G+ + N P
Sbjct: 284 FSILINGVPTPVFKPKRGIRQGDPLSPYLFILCADVLSGLITKYHDDNKLHGISIANNAP 343
Query: 468 SITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTN 527
+++HL FADDS F + + EA+ + +I Y+ SGQ INLNKS + F+ N+++ + T
Sbjct: 344 TLSHLTFADDSMVFCRANKSEAQNLMEIFADYQSISGQKINLNKSEMVFNSNLNQTIQTE 403
Query: 528 ISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIK 587
+ + + YLGLP+ + K Q+F F+ + R LS + + VLI+
Sbjct: 404 FQQYMTIKITNNIDKYLGLPTQV--LKNQIFNFIME-----------RNLSFSSRGVLIR 450
Query: 588 SITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYG 647
++ QAIP+Y F G G + + ++VL K K+ G
Sbjct: 451 AVIQAIPSYLSVDF-------------------GWGGSEEKRRIHWKSKEVL-FKSKFNG 490
Query: 648 FQGSSLF*YGHASEARVASY-----DGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWR 702
QG H +EA A + +++ +P D L A GR PS+ W
Sbjct: 491 GQGFRTM--HHFNEALFAKQAWRLIHQPQTLISKCLKAKYYPHTDLLRARRGRNPSFVWS 548
Query: 703 SIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGE 762
SIH A V+++G W++GNG + V W+P+ + F + +V+EL VE
Sbjct: 549 SIHHAEWVIQKGGCWKIGNGSQVNVWEDNWIPQHNGFKIYTPGANSSSIRQVKELLVEDP 608
Query: 763 GRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARR----L 818
W + F E I +P+ D MW + + G Y+V+SGY +
Sbjct: 609 RGWHQSILENHFLSFESERIQQLPLVQEVLEDSYMWMYSQDGNYTVKSGYNFIKEWHYNS 668
Query: 819 LRGRVHEIDGG-WWGKMWCLDASPKDKDFM 847
L G + + W W LD P+ KD +
Sbjct: 669 LPGPSNNNNNQRIWKASWNLDTIPRHKDLL 698
>IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
26299553-26300277 H EGN_Mt090430 20090702
Length = 207
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 130/206 (63%), Gaps = 21/206 (10%)
Query: 331 QCAFVPGRLISDNVAVAFELIHNIKSRKNQG--GACALKIDISKAYDRVNWEFLRGMMLR 388
Q AFV I DN +A E+IH++K RK G G ALKIDISKAYDRV+ +LRG+++R
Sbjct: 21 QSAFVEDHSILDNTLIATEIIHSVK-RKTNGWRGELALKIDISKAYDRVDGGYLRGVLMR 79
Query: 389 MGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLF 448
MGF +L+N VGPI PGRGLRQ DPLSPYLF+ A+GLS L
Sbjct: 80 MGF------------------MLMNFDRVGPIVPGRGLRQADPLSPYLFILVAEGLSTLI 121
Query: 449 QDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAIN 508
A RG + G++V P ++HLLFADD F F + ++ EA+ + ILK YE ASGQ IN
Sbjct: 122 HKAVNRGGIHGVQVCCGAPLVSHLLFADDCFLFCRANVVEAQRLLTILKTYEVASGQEIN 181
Query: 509 LNKSSIFFSPNMSRELMTNISTILNV 534
L+KS +FFS NMS ++S I+ V
Sbjct: 182 LSKSEVFFSRNMSGAAQEDLSRIIGV 207
>IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233685.2 242381-241350 H EGN_Mt090430
20090702
Length = 268
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 136/222 (61%), Gaps = 19/222 (8%)
Query: 386 MLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLS 445
M RMG ++ VKWM +C+ V Y V++NG+ V PI P RGLRQGDPLSPYLF+ C +GLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 446 LLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQ 505
+ A+ R + G+K+ R +THLLFADD F F K ++QE+ ++ +IL+ YE S Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 506 AINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRL 565
AIN K I FS N S + + S Y K++ FG+L+D +
Sbjct: 121 AINFRKPEI-FSKNTSEA---------DRSQSKMSYRY---------KKRENFGYLRDGV 161
Query: 566 EKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM 607
++I W + LS+A +EVLIK +TQAIPTYCMS F +P ++
Sbjct: 162 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTL 203
>IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233572.2 97249-98280 H EGN_Mt090430
20090702
Length = 258
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 131/222 (59%), Gaps = 29/222 (13%)
Query: 386 MLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLS 445
M RMG ++ VKWM +C+ V Y V++NG+ V PI P RGLRQGDPLSPYLF+ C +GLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 446 LLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQ 505
+ A+ R + G+K+ R +THLLFADD F F K ++QE+ ++ +IL+ YE S Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 506 AINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRL 565
AIN K I FS N S ++ FG+L+D +
Sbjct: 121 AINFRKPEI-FSKNTSE----------------------------ADRSQENFGYLRDGV 151
Query: 566 EKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM 607
++I W + LS+A +EVLIK +TQAIPTYCMS F +P ++
Sbjct: 152 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTL 193
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 189/409 (46%), Gaps = 12/409 (2%)
Query: 514 IFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWS 573
+ FSPN+S+E I L+V S G YLG+P+ G+SK+Q F F+ +R+ K+ W
Sbjct: 1 MVFSPNISQEFKEEIQKHLHVKISDGIQKYLGMPTQFGRSKEQDFHFIMERIWKKHKGWK 60
Query: 574 NRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVS 633
+ LS + VLIK++ QAIPTY MS F +P + + G + + VS
Sbjct: 61 KKCLSFEGRGVLIKAVAQAIPTYYMSCFMLPKGLCTKIEKAICSFWWGTTDKNKKMHWVS 120
Query: 634 MGEDVL*QKGKWYGFQGSSLF*YGHASEARVASYDGARYSFF*TFQSQIFP**DFLDAPL 693
+ + GF+ F ++ Y F++ +P D L A +
Sbjct: 121 KKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYYPHTDILQAKV 180
Query: 694 GRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSR---DFVDP 750
G PSYAW+SI AI V+ +G WR+G+G +I + W+P V ++ FV+
Sbjct: 181 GNYPSYAWKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVN- 239
Query: 751 NMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRS 810
+V++L E W+ + F I IP+ N D +MW + GIYSV+S
Sbjct: 240 --RVKDLINNQESLWNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKS 297
Query: 811 GYYVARRLLRGRVHEIDGG-----WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRG 865
GY R +++ W K+W L P+ K +WR L + LP + LR+RG
Sbjct: 298 GYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRG 357
Query: 866 VEVDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFF 913
++ CP C + E I H + C +K VW + N+ NF
Sbjct: 358 IQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNLCINFDNLPNPNFI 406
>IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
12585358-12584747 H EGN_Mt090430 20090702
Length = 203
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Query: 346 VAFELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVT 404
+ E++H++K S++++ ALK+ I K Y ++ +L+ +M ++ F +WV+W+M+CV
Sbjct: 2 IVIEVVHHMKISKRSRDKNVALKLYIGKGYVCIDRLYLKEVMQKLEFANRWVRWIMMCVE 61
Query: 405 DVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGR 464
YSV++N + VGPI GRGLRQGDPLSPYLF+ CA+G L + R + + +
Sbjct: 62 TDDYSVIVNNESVGPIFLGRGLRQGDPLSPYLFILCAEGHLALIHKGEWREDMHDISICT 121
Query: 465 NCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSREL 524
N P I+HLLFADD F FF + EA + IL+ YE S QAINL KS ++++ N+S L
Sbjct: 122 NAPVISHLLFADDCFLFFWLNEIEAHMMKHILEIYEAVSSQAINLPKSEVYYNHNVSAPL 181
Query: 525 MTNISTILNVAGSIGGGTYLG 545
I+T L+V +G G YL
Sbjct: 182 KDFITTTLDVRAVMGTGKYLN 202
>IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
1329629-1330366 H EGN_Mt090430 20090702
Length = 245
Score = 170 bits (430), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 8/252 (3%)
Query: 234 MQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILC 293
M+ +PGPDGL F+ ++W V+G + D L+ P +I L+PK +
Sbjct: 1 MKSLAAPGPDGLPALFYHHYWDVLGTEAALDV---LNNNADPSPFNSTNICLIPKKN--- 54
Query: 294 R*KSIDLFRFVMFCIKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELIHN 353
F +K+ K IL +I Q AF+PGRLISDN +++E+ H
Sbjct: 55 --NPSHPSDFWPIALKIITKTIANRLKPILGEVISGNQSAFLPGRLISDNTLMSYEIFHY 112
Query: 354 IKSRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLN 413
+ + ++ G +K ++KAYD+V W FL ML+MGF ++V +M CVT V +S+L++
Sbjct: 113 LSNTSSKKGYMGMKTVMAKAYDKVEWTFLEATMLKMGFPHQFVSTIMRCVTTVTFSILID 172
Query: 414 GKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLL 473
G +P RGLRQGDPLSPYLF+ C S L A + G+K+ P ITHL
Sbjct: 173 GSNSKEFQPQRGLRQGDPLSPYLFIICVDVFSELINKANNNKLIHGVKIVNGAPEITHLF 232
Query: 474 FADDSFFFFKGS 485
FAD + F K +
Sbjct: 233 FADANLTFCKAT 244
>IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
13555953-13554878 H EGN_Mt090430 20090702
Length = 318
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 166/326 (50%), Gaps = 18/326 (5%)
Query: 139 WLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE*V 198
WL GD N+K+FH+ + +R+R I L + +G IV+ + + + N+FS+ + +
Sbjct: 10 WLKKGDANTKFFHSIMSSRRRANSIFSL-SANGTIVEGVEGIRGLVFNHFSSHFKSVAAE 68
Query: 199 GIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIG 258
I NL + Q LT PF++DE+++A +D KSPGPDG+N F ++FW +
Sbjct: 69 RPSIENLNFNILNLGQCGELTKPFSIDEVKQAVWDCDSFKSPGPDGVNMGFVKDFWPELR 128
Query: 259 DDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KSIDLFRFVMFCIKL*QNL*RIG 318
DDI + G K + + I L+PK + R ++ FR + L
Sbjct: 129 DDIMHFLSDFHRNGKLSKGINNTFIALIPKIECPQR---LNDFRPISMVGSL-------- 177
Query: 319 *KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISKAYDRVN 378
KIL ++ + I D + +A E++ + K K K+D KA+D +N
Sbjct: 178 -YKILSKVLSNRLRRVIQ---ILDGILIANEIVKDAKRLKKD--LLLFKVDFEKAFDSIN 231
Query: 379 WEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFL 438
W +L +M +M + W KW+M CV+ SVL+NG + RGLRQGDP SP+LFL
Sbjct: 232 WSYLEAVMKKMNYPTLWRKWIMECVSTASTSVLVNGSPTDEFKLERGLRQGDPFSPFLFL 291
Query: 439 FCAKGLSLLFQDAKRRGRLQGMKVGR 464
A+GL+++ + G G K+G+
Sbjct: 292 IAAEGLNVMMKALIEAGLFSGYKLGQ 317
>IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
23554745-23554236 H EGN_Mt090430 20090702
Length = 169
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 104/153 (67%)
Query: 399 MMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQ 458
M +C+ V Y VL+NG+ VGPI P RGLRQGDPLSPYLF+ CA+GLS L + A+ RG +
Sbjct: 1 MTMCIESVNYQVLVNGESVGPINPKRGLRQGDPLSPYLFILCAEGLSALLRRAETRGDIH 60
Query: 459 GMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSP 518
G+KV R P +THLLFA D F F + S+ + ++ ++L YE +GQAI+ KS IFF
Sbjct: 61 GVKVCRGAPLLTHLLFAYDCFLFCRSSIMKCTKIKEVLHVYESVTGQAIHFEKSEIFFGK 120
Query: 519 NMSRELMTNISTILNVAGSIGGGTYLGLPSLIG 551
N S+ I +L V+ ++G G YLG+PS++G
Sbjct: 121 NTSQADRKAIKNLLQVSANMGNGKYLGMPSMVG 153
>IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13557404-13554904 H EGN_Mt090430 20090702
Length = 447
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 138/249 (55%), Gaps = 50/249 (20%)
Query: 330 CQCA------FVPGRLISDNVAVAFELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFL 382
CQ A F+PGRLI DN +A E+I+++K S++ + LK+DISKAYDR++W +L
Sbjct: 62 CQVAKDNPSDFIPGRLILDNAMIAIEVIYHMKISKRMRDKNVTLKLDISKAYDRIDWLYL 121
Query: 383 RGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAK 442
+ +M++MGF W++W+M+CV V Y V++N + VGPI PGRG RQGDPLS YLF+ CAK
Sbjct: 122 KQIMVKMGFVTHWIRWIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK 181
Query: 443 GLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERA 502
D+ +EA + IL+ YE A
Sbjct: 182 ---------------------------------DE---------REANVMKHILETYEAA 199
Query: 503 SGQAINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFG-FL 561
SGQAI+L KS +++S ++ + I++IL IG YLGL +IG+S G FL
Sbjct: 200 SGQAISLPKSKVYYSRSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQSAYFPHGDFL 259
Query: 562 QDRLEKRIG 570
RL +G
Sbjct: 260 SSRLGANLG 268
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 679 QSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHS 738
QS FP DFL + LG + RSI +A V+KQG RWR+G+G TI +LS PW+ + S
Sbjct: 249 QSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECS 308
Query: 739 FWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMW 798
+++ ++KV+++ W+ + LF + IL + + D+++W
Sbjct: 309 LTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIW 368
Query: 799 HWDKKG 804
+K G
Sbjct: 369 KVEKNG 374
>IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13373662-13371162 H EGN_Mt090430 20090702
Length = 447
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 138/249 (55%), Gaps = 50/249 (20%)
Query: 330 CQCA------FVPGRLISDNVAVAFELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFL 382
CQ A F+PGRLI DN +A E+I+++K S++ + LK+DISKAYDR++W +L
Sbjct: 62 CQVAKDNPSDFIPGRLILDNAMIAIEVIYHMKISKRMRDKNVTLKLDISKAYDRIDWLYL 121
Query: 383 RGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAK 442
+ +M++MGF W++W+M+CV V Y V++N + VGPI PGRG RQGDPLS YLF+ CAK
Sbjct: 122 KQIMVKMGFVTHWIRWIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK 181
Query: 443 GLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERA 502
D+ +EA + IL+ YE A
Sbjct: 182 ---------------------------------DE---------REANVMKHILETYEAA 199
Query: 503 SGQAINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFG-FL 561
SGQAI+L KS +++S ++ + I++IL IG YLGL +IG+S G FL
Sbjct: 200 SGQAISLPKSKVYYSRSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQSAYFPHGDFL 259
Query: 562 QDRLEKRIG 570
RL +G
Sbjct: 260 SSRLGANLG 268
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 679 QSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHS 738
QS FP DFL + LG + RSI +A V+KQG RWR+G+G TI +LS PW+ + S
Sbjct: 249 QSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECS 308
Query: 739 FWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMW 798
+++ ++KV+++ W+ + LF + IL + + D+++W
Sbjct: 309 LTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIW 368
Query: 799 HWDKKG 804
+K G
Sbjct: 369 KVEKNG 374
>IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
40247310-40247920 H EGN_Mt090430 20090702
Length = 187
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 320 KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQG--GACALKIDISKAYDRV 377
K+ L + E Q F R I DN +A E+IH++K RK +G G ALKIDISKAYDRV
Sbjct: 26 KRCLDKCVLEEQSTFFKSRSILDNALIATEIIHSMK-RKTKGWRGELALKIDISKAYDRV 84
Query: 378 NWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLF 437
+W FLRG+++RMGF EKW++WMM+CV+ V YSVL N VGPI PGRGLRQGDPLSPYLF
Sbjct: 85 DWGFLRGVLMRMGFSEKWIQWMMMCVSSVTYSVLTNFDRVGPIVPGRGLRQGDPLSPYLF 144
Query: 438 LFCAKGLSLLFQDAKRRGRLQGMKVGRNCP 467
+ A+GLS L G + G++V R P
Sbjct: 145 ILVAEGLSTLIHKIVNSGDIHGVQVCRGAP 174
>IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
4206337-4207793 E EGN_Mt090430 20090702
Length = 357
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 24/320 (7%)
Query: 457 LQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFF 516
+ G+ + RN P+I+HL FADD+ F + + EA+ + +I +Y+R GQ INLNKS + F
Sbjct: 30 IMGISIARNAPAISHLFFADDNMIFCRANKSEAKHLKEIFDEYKRVLGQKINLNKSEMVF 89
Query: 517 SPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRF 576
SPN+ + + + + + YLGLP+ +G+SK F F+ +R+ ++ W R
Sbjct: 90 SPNIIQSVKKEFQDFMPIQITDSITKYLGLPTQVGRSKTHTFNFIMERVRAKLKGWKERN 149
Query: 577 LSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMV-----GGEGRRA*RDSL 631
LS + + VLI+++ QA+PTY MS+F IP + EQ + G E RR +
Sbjct: 150 LSFSGRGVLIRAVIQALPTYVMSMFLIPEGI---CDKIEQAICRFWWGGNEDRR----RI 202
Query: 632 VSMGEDVL*QKGKWYGFQG-SSLF*YGHASEA----RVASYDGARYSFF*T-FQSQIFP* 685
+D L K K+ G QG ++ + A A R+ Y SF T +++ FP
Sbjct: 203 HWKNKDFL-FKPKFSGGQGFRTMRSFNEALLAKQVWRLIKYPT---SFLATCLKAKHFPN 258
Query: 686 *DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSF-WVEDS 744
D L A LG +PS+ W SI+ ++K+G RW +G+G+ I V W+P + F V
Sbjct: 259 TDVLKAKLGNQPSFVWSSIYHTKWIIKKGGRWLIGDGKKIDVWDDNWLPHQNGFKTVSKP 318
Query: 745 RDFVDPNMKVRELFVEGEGR 764
+ +D + V++L VEG+ +
Sbjct: 319 TNNIDIRI-VKDLMVEGQKK 337
>IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
12119249-12120974 H EGN_Mt090430 20090702
Length = 477
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 204/466 (43%), Gaps = 60/466 (12%)
Query: 418 GPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADD 477
G RP LRQGDPLSPYLF+ C + LS + +A R + + + RN P ++HL FADD
Sbjct: 13 GQKRPIGRLRQGDPLSPYLFVMCMENLSHMILEAVDDSRWKPVTLSRNGPPLSHLFFADD 72
Query: 478 SFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTILNVAGS 537
F K ++ + + D+ K+ SG +N +KS FFS ++ + + ++ + +
Sbjct: 73 VLLFSKATVSQVRVMEDVFTKFAGTSGLKVNTSKSRAFFSNVVTHSKINTMVSVTGIHNT 132
Query: 538 IGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYC 597
YLG P G+ K+ + FL D+++ + +W N+ L++A + L KS+ AIPTY
Sbjct: 133 SSLDKYLGFPIFHGRMKRVDYDFLIDKVQSCLASWKNKLLNKAGRLTLAKSVLNAIPTYY 192
Query: 598 MSVFKIPLSM*N--DAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF* 655
M + P S+ N D + + G +G+ LVS + + K G G +
Sbjct: 193 MQISWTPQSICNQLDKMTRKFIWKGTDGKGV---HLVSWDKIT---RPKSLGGLGVRV-- 244
Query: 656 YGHASEARVAS-----YDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGV 710
+A+ A + + A S+ ++ + LD P + S W S+ A V
Sbjct: 245 ARNANTALLGKLVWDIHTNANKSWVQILSNKYLGNYNVLDVP-KKNGSTTWNSMLKARSV 303
Query: 711 LKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKV 770
L+ G+ +RVGNG T SFW W +
Sbjct: 304 LRDGLVFRVGNGTT-------------SFWYSS---------------------WTT--L 327
Query: 771 MTLFSLREFRAILGIPISIN--ANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDG 828
T S+ + I I + I D I W GIY+VRSGY+ H+ D
Sbjct: 328 GTFASMVLWVDIHYISLCIRDLIIDDHITWANHLDGIYTVRSGYFWLLTTHSEDHHDEDV 387
Query: 829 GW-WGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCP 873
W W +W + A K K W A LPTK L RR V G P
Sbjct: 388 SWNW--IWKMKAPEKIKFLFWTASHVSLPTKALLHRR---VPPGLP 428
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 184/396 (46%), Gaps = 23/396 (5%)
Query: 563 DRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGE 622
DR+ K++ W + LS + VLI+++ QAIP Y MS + +P+S+ D + G
Sbjct: 2 DRIRKKLKGWKEKNLSFEGRGVLIRAVAQAIPVYVMSCYLLPISLCEDIERAVCNFWWGG 61
Query: 623 GRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEA----RVASYDGARYSFF*TF 678
+ VS + +L ++ K G L + A A R+ Y + +
Sbjct: 62 TEHTRKIHWVS--KQILFKQKKEGGMGFKILRDFNLAMLAKQIWRLHIYPDSLLAK--CL 117
Query: 679 QSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHS 738
+++ +P D L A G PSYAWRS+ +I +L +G WR+GNG+ + + S W+P ++
Sbjct: 118 KAKYYPNSDVLKATAGYNPSYAWRSLQKSIWILNKGCCWRIGNGDQVHIQSDNWLPYNNG 177
Query: 739 FWVEDSRDFVDPNMK--VRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQI 796
+ + +PN V++L E W+ + F + I +PI D +
Sbjct: 178 Y----KPIYSNPNSPPMVKDLLTEFPFDWNYNLLQQNFLPMDSSQIAQLPIIHPNKPDVL 233
Query: 797 MWHWDKKGIYSVRSGY-----YVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRAL 851
MW +D G Y+V+SGY + A ++ W K+W L P+ K +WR L
Sbjct: 234 MWMFDLSGSYTVKSGYNAIQNWKATASNDSSASSVNNTLWQKLWNLKTIPRHKSLLWRIL 293
Query: 852 RNVLPTKERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGDINIS-- 908
N LP ++ L RRG++ I CP C +EE + H + CS ++ VW + +IS
Sbjct: 294 NNSLPLRDNLLRRGIQCSILCPRCNIKEETMTHLFMRCSHSERVWFGSQLSIQMPSISNQ 353
Query: 909 -FTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNAL 943
F+++ + + D +W ARN A+
Sbjct: 354 QFSDWIAETILNKDSNTVIQVAAITYSLWYARNQAV 389
>IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr01_pseudomolecule_IMGAG_V3 1684225-1680716 E
EGN_Mt090430 20090702
Length = 659
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 112/205 (54%)
Query: 400 MLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQG 459
M C+T S+ NG+++ +P RGLRQGDPLSPYLF+ C + LSL+ Q+ +
Sbjct: 1 MSCITSSSLSLKWNGEKLDSFKPKRGLRQGDPLSPYLFVLCMEKLSLMIQNQVTNNTWRP 60
Query: 460 MKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPN 519
+K+ R+ PS +HLLFADD F + + + V ++L+K+ ASG IN+ K S N
Sbjct: 61 IKISRHGPSFSHLLFADDCLLFTEAKSSQVKVVRNVLQKFCFASGLKINIQKLKFMSSSN 120
Query: 520 MSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSR 579
+SR ++L + G YLG P L G+ K F F+ D++ R+ W LSR
Sbjct: 121 VSRHKQHKFESLLQFNHTSHLGKYLGFPMLSGRIKNSDFNFILDKINGRLAGWKMNLLSR 180
Query: 580 ARKEVLIKSITQAIPTYCMSVFKIP 604
+ L KS+ A+P Y M +P
Sbjct: 181 PGRITLAKSVVTAMPIYTMQNLWLP 205
>IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
13465118-13466957 H EGN_Mt090430 20090702
Length = 509
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 224/527 (42%), Gaps = 88/527 (16%)
Query: 68 LLHKRDVCIKE-MEKWGRQFNKIFWKKKRILKQRIANARDVFDDV--TVQRLKNEWNTIL 124
+LH + C+K+ ++ W + F K I +Q ++ A+ D + ++ R + E + +
Sbjct: 3 VLHYKMKCLKQKLQVWNKTVVGNFHTKVYIAQQHLSEAQLAIDQMGFSIARSQVELDCMT 62
Query: 125 FKEECRM------RQIRKQRWLYWGDQNSKYFH--ASIKNRKRRAKILKLENEDGDIVQD 176
+ ++ K GD+N+ Y H A I+ + +LK +E + ++
Sbjct: 63 SYSQALNHLNSFWKEKSKTVRFLEGDRNTAYLHRQAKIREAQSYLSMLKHGDEILNRYEE 122
Query: 177 NDSLEQITLNYFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQP 236
N+ E+I + VT NN+L+ + +EI+ A F +
Sbjct: 123 NELPERI----------------------IPHLVTLEDNNMLSVVPSAEEIKRAIFGLNG 160
Query: 237 DKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPK---CDILC 293
D SPGPDG + F+ FWH+IG D+ + ++ + L ++L+PK D L
Sbjct: 161 DSSPGPDGFSGHFYHCFWHIIGGDVVKSTQHFFLNNYIMPNLNSNLLILIPKVIGADTLD 220
Query: 294 R*KSIDL--FRFVMFCIKL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELI 351
+ I L F+F + L L I K II Q F+PGR I + + VA E+
Sbjct: 221 NFRPIALANFQFKIITKILGDRLGIIAAK-----IISTHQRGFIPGRSIQECIMVASEV- 274
Query: 352 HNIKSRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVL 411
+ W++ + + S+
Sbjct: 275 -------------------------------------------FCDWIITILHSARLSIN 291
Query: 412 LNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITH 471
+NGK VG + RG+RQGDPLSP LF + LS ++ RGR+ ++ R+ +H
Sbjct: 292 INGKSVGFFKCTRGVRQGDPLSPILFCIAEEVLSRGIEELVVRGRMTQIRATRSLYIPSH 351
Query: 472 LLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTI 531
L+ADD F KG+L + + +L+ Y SGQ IN KS F++ ++ + I ++
Sbjct: 352 CLYADDILIFCKGTLANVKNLMHLLEGYGNYSGQLINAQKSK-FYTGSIPLSKINAICSL 410
Query: 532 LNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLS 578
+ YLG+ GK K + D+++ R+ W L+
Sbjct: 411 TGFSQGCIPLNYLGILLFKGKPKSIYLKPIVDKIQLRLNAWKGTLLT 457
>IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 4275704-4277642 H
EGN_Mt090430 20090702
Length = 171
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 105/154 (68%)
Query: 454 RGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSS 513
+G + G+K R P+++HLLFADD F F + + E + + IL++YE ASGQ +NL KS
Sbjct: 7 KGDIPGIKNFRRGPAVSHLLFADDCFIFCRAKVNEVQHLISILREYEEASGQQVNLAKSE 66
Query: 514 IFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWS 573
+FF NMS+ +++ IL V ++G GTYLGLPS++G+SKK FG+++D++ ++I +W
Sbjct: 67 VFFGNNMSQAAKQDLANILGVKHALGTGTYLGLPSMVGRSKKATFGYIKDKIWRKINSWR 126
Query: 574 NRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM 607
R LS++ KE +IKS+ Q IP+Y MS + M
Sbjct: 127 GRSLSKSGKETMIKSVLQLIPSYIMSCSNLKRDM 160
>IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
13863857-13863375 E EGN_Mt090430 20090702
Length = 116
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 85/116 (73%)
Query: 370 ISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQG 429
+SKAYDR+NWE+LR +MLR+GF KW W+M+CV VKY VL+N + GPI PG GLR+G
Sbjct: 1 MSKAYDRINWEYLRRVMLRLGFDAKWFGWIMMCVESVKYKVLVNQESEGPILPGSGLRKG 60
Query: 430 DPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGS 485
DPLSPYLF+ CA+GL+ L A+ RG L G++V P+ THLLF DD F F + +
Sbjct: 61 DPLSPYLFILCAQGLTSLIDKAEGRGDLHGVRVCTGAPTFTHLLFVDDCFLFCRAT 116
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 163/340 (47%), Gaps = 19/340 (5%)
Query: 546 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPL 605
+P+ G+SK+Q F F+ DR+ K++ W + LS + LI++I QAIPTY MS F +P
Sbjct: 1 MPTQFGRSKEQDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAIAQAIPTYVMSCFLLPK 60
Query: 606 SM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKW-YGFQGSSLF*YGHASEARV 664
+ + G G + R + E++ + K GF+ F ++
Sbjct: 61 GLCEKIEKAVCAFWWG-GSDSKRKIHWTKKENLFKPRHKGGMGFKILRDFNMAMLAKQVW 119
Query: 665 ASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGET 724
+ F+++ FP D L LG SYAWRSI +I V+++G W++GNG+
Sbjct: 120 RFQTNQKSLISRVFKAKYFPYQDILQTNLGYNLSYAWRSIFHSIWVIQKGSCWKIGNGQK 179
Query: 725 IGVLSHPWMPRDHSFWVEDSRDFVDPNMK------VRELFVEGEGRWDVGKVMTLFSLRE 778
+ + W+P + R F PNM V++L E W+ + T F +
Sbjct: 180 VRIWEDNWIPTHQNL-----RIFT-PNMGNPDVVLVKDLINTDEPSWNNSILNTHFLSID 233
Query: 779 FRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHE-----IDGGWWGK 833
I IP+ AN D+I+WH+++ G Y+VRSGY + + E I+ W K
Sbjct: 234 KDQIECIPLINLANDDEIIWHFNQDGNYTVRSGYQAIQNWKITTISEPSNSNIETNLWKK 293
Query: 834 MWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCP 873
+W + P+ K +WR L N LP + L +RG+ + CP
Sbjct: 294 LWTIHTIPRHKMILWRVLNNTLPLRSELGKRGILCNPLCP 333
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 129/277 (46%), Gaps = 14/277 (5%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
F+++ FP DF+ + +G PSY WRSI +A V+KQG RWR+G+G I L PW+
Sbjct: 127 FKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGARWRIGSGVNIPFLGAPWLKDGL 186
Query: 738 SFWVEDSRDFVDPNMKVREL-FVEGEGR-WDVGKVMTLFSLREFRAILGIPISINANRDQ 795
S + + +P M+V+ F+E + + W + +LF + IL P+ D+
Sbjct: 187 SLSITNP--IFEPLMQVKLCDFIEQDVKMWKAPLIHSLFDAQTAELILNTPLQPLVLEDK 244
Query: 796 IMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVL 855
++W +K G YS++S Y + + H G W +W L PK K F+WR R
Sbjct: 245 MIWKGEKNGTYSLKSAYRICVTEIADNSHMHVNGRWNLIWKLKVPPKIKKFLWRVCRGCF 304
Query: 856 PTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGY-------EVGDINI 907
PT+ RL RGV + C C ED H ++ C K VWR D NI
Sbjct: 305 PTRARLNSRGVSCPLDCVHCNHNYEDSIHILIECPKVVQVWRNANLWDTIDRVIHQDYNI 364
Query: 908 SFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
S F L L + K + +W RN LW
Sbjct: 365 SALIFTL--LQNLSSGKCELMATIMWSLWKCRNMKLW 399
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%)
Query: 488 EAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLP 547
EA+ + +IL YE ASGQAI+L KS +FFS + L I+ IL V +G G YLGLP
Sbjct: 16 EAQVMKNILHTYELASGQAISLPKSEVFFSTVVPLPLKETITNILGVRAVMGTGKYLGLP 75
Query: 548 SLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKE 583
S++G+SK+ FGF++DR+ +I +WS++ LS+A +E
Sbjct: 76 SMVGRSKEATFGFIKDRIWHKINSWSSKCLSKAGRE 111
>IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase
chr04_pseudomolecule_IMGAG_V3 40245955-40247247 H
EGN_Mt090430 20090702
Length = 395
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 137/264 (51%), Gaps = 24/264 (9%)
Query: 10 LAKIITAPVSDHAPLFIQLNYQQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSGTLL 69
L ++T+ SDH P+ + + + F+F+NSW+ L+++V D W +G L
Sbjct: 155 LTNLLTSH-SDHTPILLDIVPSVRQMHNYSFKFENSWL----LEEVVVDGW-GGTTGLEL 208
Query: 70 HKRDV-CIKEMEKWGRQFNKIFWKKKRILKQRIANARDVFDDVTVQRLKNEWNTILFKEE 128
R V C +++ WGR +K+ K+ I + +++ ++ EE
Sbjct: 209 GDRVVNCSTKLQSWGR-------RKRVRFKEEINQCVRILEELRASQM----------EE 251
Query: 129 CRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYF 188
+Q K WL GD N+K+FH S R + K+ KL +DG + + + +YF
Sbjct: 252 AFWKQRVKMHWLKEGDINTKFFHTSAIARGKVKKVSKLRTDDGITDTTQEDMCNVAQSYF 311
Query: 189 STVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPA 248
++SA V + +L+ V+ N ILT+P T E+R+A F MQPDKSPGP+G N A
Sbjct: 312 EQLFSANAGVHEPVLDLMNKCVSIDDNIILTSPITKQELRQALFQMQPDKSPGPNGFNQA 371
Query: 249 FFQNFWHVIGDDIWRDSKQWLDTG 272
F+Q FW+V GDDI++ WLD G
Sbjct: 372 FYQRFWYVCGDDIFQAVVSWLDRG 395
>IMGA|Medtr8g037100.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 7957038-7958530 H
EGN_Mt090430 20090702
Length = 410
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
++++ FP +FL+A LG PS+ WRSI+ + +L+ G RW++G+G +I V ++ WM +
Sbjct: 23 YKARYFPRCNFLEAELGHNPSFVWRSIYKSKFILRAGSRWKIGDGMSISVWNNYWMKDNV 82
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIM 797
+ + D N++V + + + WDV + ++FS + I+ P+ + DQ++
Sbjct: 83 TIFPLDDVATTLANLRVSDCLLPNQKSWDVPFLHSIFSEQIVEHIVATPLYSSVREDQLI 142
Query: 798 WHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPT 857
W + YSVRS Y + L H G W +W L P+ K+ +WR RN LPT
Sbjct: 143 WKKENNEEYSVRSAYRLCLNELLDTSHFKVEGAWDLVWKLKVPPRVKNLIWRICRNFLPT 202
Query: 858 KERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGVW 895
++RLR +GV C C EEE H + C+ + +W
Sbjct: 203 RKRLRDKGVNCTTVCALCNLEEEGSMHLLFKCAGSMNIW 241
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 183/416 (43%), Gaps = 50/416 (12%)
Query: 543 YLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFK 602
YLG+P+ +G SK+Q F FL DR+ ++ W + LS + +LI+++ QAI TY MS F
Sbjct: 22 YLGMPTHLGMSKEQDFQFLMDRVWNKLKGWKEKSLSFEGRGILIRAVAQAISTYIMSCFL 81
Query: 603 IPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEA 662
+P + + + G R + E++ K K G G ++ + A
Sbjct: 82 LPKGLCDKIEKAVCAFWWGSTDNK-RKIHWTKKENLF--KSKLEGGMGFNIL--RDFNLA 136
Query: 663 RVASYDGARYS-----FF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRW 717
+A D ++ ++++ +P + L A +G PSYAWRSI A+ ++K+G W
Sbjct: 137 MLAKQDWRFHTEPNSLISRCYKAKYYPHCNVLQATIGNNPSYAWRSIFNALWIIKKGSCW 196
Query: 718 RVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLR 777
R+GNG+ +L + W+ + F
Sbjct: 197 RIGNGQ-------------------------------EDLIMVNSSTWNSELLNNQFLGI 225
Query: 778 EFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEI-----DGGWWG 832
+ AI IPI +RD +MW ++K G Y+V+SGY + G + + W
Sbjct: 226 DTEAIEQIPIIDIFHRDTLMWMFEKTGSYTVKSGYTAIQIWKNGSQNSPSSSSENTKLWK 285
Query: 833 KMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKA 891
K+W L P+ K +WR L N +P + L +RGV CP C + E +H + C
Sbjct: 286 KIWNLHTIPRHKTILWRILNNSIPLRSELGKRGVLCSPLCPRCETKIETTDHIFMHCPNI 345
Query: 892 KGVWRQGGYEVGDINISFTNFFL*VLAHGDKIKSQHFLVYARY---IWMARNNALW 944
+W + + +++ +F ++ +K + A IW ARN +++
Sbjct: 346 SKIWFRSNLNLKTLDLPIPSFRDWLMHSILTLKEDTIIQIASITYNIWQARNQSIY 401
>IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873812-31875697 H EGN_Mt090430 20090702
Length = 485
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 173/431 (40%), Gaps = 100/431 (23%)
Query: 520 MSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSR 579
MS +++ IL V +G G YLGL S+IG+SK F +++DR+ ++I +W R LS+
Sbjct: 1 MSHVAQEDLARILGVRLVLGTGKYLGLTSMIGRSKTTTFAYIKDRIWQKINSWRGRALSK 60
Query: 580 ARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL 639
A KEV+IK + Q+IP+Y MS++ +P ++ ND + G G + ++ ++
Sbjct: 61 AGKEVMIKFVLQSIPSYIMSIYVLPRTVINDIEMMLNSFWWGGGGGNGGWNFLTNPPSLI 120
Query: 640 *QKGKWYGFQGSSLF*YGHASEARVASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSY 699
Q K ARY FP FLDA G PSY
Sbjct: 121 SQIFK-------------------------ARY----------FPITSFLDAKFGFNPSY 145
Query: 700 AWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFV 759
AWR I + +L +G RW +G+G I V+ PW+ +K +E
Sbjct: 146 AWRIIWMSRQILSRGCRWSIGDGSHIRVMGDPWLCSGSQL------------LKTKE--- 190
Query: 760 EGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLL 819
W ++ + + D+++W + G+YSVRSGY++ R +
Sbjct: 191 -----WA-------------HVVIQTSLFPSVQEDKVVWQEESNGLYSVRSGYHIVVREV 232
Query: 820 RGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCG-EE 878
H R +PT+ L +R V C WC EE
Sbjct: 233 VPSTH--------------------------YRGCIPTRVNLNQRHVSCTNICLWCDYEE 266
Query: 879 EDINHAIVLCSKAKGVWRQGGYEV---GDINI--SFTNFFL*VLAHGDKIKSQHFLVYAR 933
E HA V C A+ W G V +N+ S + + V
Sbjct: 267 ETYWHAFVECEVARESWFSTGLSVVLLPRVNLFQSLSELIFYICCTESADAGGCIAVMLW 326
Query: 934 YIWMARNNALW 944
+W A NN +W
Sbjct: 327 QLWAAHNNVVW 337
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 171/384 (44%), Gaps = 36/384 (9%)
Query: 572 WSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGG-----EGRRA 626
WS++ LS+A +EV+IKS+ Q IP+Y MSVF +P ++ ++ + MV G G R
Sbjct: 41 WSSQCLSKAGREVMIKSVLQVIPSYIMSVFLLPTTLVDEIEK----MVNGFWWGHGGSRR 96
Query: 627 *RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEARVASYDGARYSFF*TFQSQIFP** 686
+S + + + GF+ + F + F+++ FP
Sbjct: 97 KGIHWLSWDKLTVHKNYGGMGFKDLTAFNLVMLGKQGWKFQTQTNCLVSKLFKARYFPSS 156
Query: 687 DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRD 746
D+L A LG +PS+ WRSI +A V+++G + G G+ V+ H + HS
Sbjct: 157 DYLGAKLGHKPSFVWRSIFSAKRVIREGGKCVSGEGQNSEVIQH---AKIHS-------- 205
Query: 747 FVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIY 806
+D N++ W+ + F + IL P+ DQ++W +K G Y
Sbjct: 206 LIDHNLRC----------WNQDVIHCYFDNSTAQQILKTPLFRQVEEDQLIWKAEKNGHY 255
Query: 807 SVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGV 866
SVRS Y + + + G+W +W L ASPK K+ +WR LPT+ +L + V
Sbjct: 256 SVRSAYRICMEEIGDNSYLHRPGFWNGIWKLKASPKVKNLIWRICLGCLPTRAKLLDKRV 315
Query: 867 EVDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGG-----YEVGDINISFTNFFL*VLAHG 920
C C G ED H + C +A+ +WR Y N + + +L +
Sbjct: 316 NCTSMCSMCDGNYEDDLHVLFDCQRARSIWRDSHLSNDIYVAMQTNNTAADIVSALLQNL 375
Query: 921 DKIKSQHFLVYARYIWMARNNALW 944
K Q F+ +W +RN +W
Sbjct: 376 PHTKIQLFVTLVWSLWKSRNIQVW 399
>IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
2111344-2110511 H EGN_Mt090430 20090702
Length = 277
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 17/264 (6%)
Query: 37 YRRFRFDNSWVGERELDQLVKDVWCNNDSGTLLHKRDVCIKEMEKWGRQFNKIFWKKKRI 96
+ RF F+N+W+ + + V + W + + K +C+ ++ W R N
Sbjct: 14 HNRFMFENAWLIDPKFHNFVCNKWHSYGENDISAKSSMCVADISLWNR--NHFLH----- 66
Query: 97 LKQRIANARDVFDDVTVQ----------RLKNEWNTILFKEECRMRQIRKQRWLYWGDQN 146
LK I N R D V Q L+ + +L KE+ RQ K W GD N
Sbjct: 67 LKHDIDNCRRKLDCVLSQVHAGNIKYFNALRKCMSHLLAKEDTFWRQRAKTHWFREGDLN 126
Query: 147 SKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE*VGIEIFNLV 206
+++FHA+ +R++ + L N ++D+ L + +YF+ ++ + + + +
Sbjct: 127 TRFFHAAATSRRKINCLTSLVNTPSTRIKDSLVLCSVPRDYFAEIFHKPINILYPVLDAI 186
Query: 207 QPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSK 266
P ++ N LT FT+DE R+A F M+ DK GP NP F+Q FW +IG +I+++S
Sbjct: 187 NPSISEDANTNLTTLFTIDEFRDAMFSMKLDKYLGPGRFNPDFYQYFWPLIGQEIFQESY 246
Query: 267 QWLDTGTFPKTLTDIHIVLLPKCD 290
WL TGTF TL +I L+PK D
Sbjct: 247 SWLTTGTFLSTLNLTNIALIPKDD 270
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 546 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPL 605
+P+ G+SK+Q F FL DR+ K++ W + LS + VLI+ + QAIPTY MS F +P
Sbjct: 1 MPTHFGRSKEQDFNFLMDRIWKKLKGWKEKSLSFEGRGVLIRVVAQAIPTYIMSCFLLPK 60
Query: 606 SM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEARVA 665
S+ + + G + + + GF+ F ++
Sbjct: 61 SICDRIERAICSFWWGSNETKRKIHWIKKDHLFKFKHDGGMGFRNLRDFNLAMLAKQVWR 120
Query: 666 SYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETI 725
+ + ++++ +P D L G PSYAWRSI +I ++ +G R+GNG
Sbjct: 121 LHTQPQSLIARCYKARYYPNSDVLQVSQGYNPSYAWRSISQSIWIINKGSCKRIGNGYNT 180
Query: 726 GVLSHPWMPRDHSFWVEDSR-DFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILG 784
+ W+P +F V + D + N+ V++L + W+ + F E I
Sbjct: 181 KIWEDNWIPYHSNFKVLSPKLDTTNINL-VKDLIQDNGTEWNTDILQANFIPYEQDLIKQ 239
Query: 785 IPISINANRDQIMWHWDKKGIYSVRSGYYVARRLL-----RGRVHEIDGGWWGKMWCLDA 839
IP+ + N D++MW D G+Y+V+SGY + R W K+W L
Sbjct: 240 IPLINHNNSDELMWMKDTDGLYTVKSGYQAIQSWKQNDQDRPTTSNTSPKIWKKLWALQT 299
Query: 840 SPKDKDFMWRALRNVLPTKERLRRR 864
P+ K MWR + N LP ++ ++
Sbjct: 300 IPRHKMLMWRIINNALPINSKMDKQ 324
>IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
31059249-31058149 H EGN_Mt090430 20090702
Length = 344
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 123/237 (51%), Gaps = 8/237 (3%)
Query: 710 VLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGK 769
VL +G RWR+G+G I V+ PW+ +H W+ ++ ++ + +L +EG WDV K
Sbjct: 2 VLLRGCRWRIGDGTQIRVMHDPWLRNEHGGWLASPQNQDVYDLFLADLMIEGGKEWDVDK 61
Query: 770 VMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYV-ARRLLRGRVHEIDG 828
+ L S ++L P+ + DQ++W ++ G+YSV++GY + AR ++ +++ G
Sbjct: 62 IFDLLSFESANSVLKTPLFPSVQDDQVIWQEEQNGVYSVKTGYRIDARDVVPASQYQVRG 121
Query: 829 GWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVL 887
W K+W + + PK ++ +WR +PT+ +L R V CPWCG E + + HA +
Sbjct: 122 D-WNKLWKVCSPPKARNLLWRICPGCIPTRVKLVHRQVPCAYLCPWCGLEAETDWHAFIG 180
Query: 888 CSKAKGVWRQGGYEVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
C+ AK W G + F + + + L++ IW ARN+ +W
Sbjct: 181 CTIAKESWSFAGLSELLHELVFN---ICSCESANAVGRGAVLLWQ--IWSARNDVVW 232
>IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC235669.1 69436-68759 H EGN_Mt090430
20090702
Length = 225
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 6/220 (2%)
Query: 208 PKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQ 267
P+++ + LT DE+ F M+ K+PGPDG P FF++FW IGDDI R
Sbjct: 2 PRLSEQCRDSLTTLILKDEVGSTVFSMKSYKAPGPDGFQPIFFKHFWERIGDDIRRLVHT 61
Query: 268 WLDTGTFPKTLTDIHIVLLPKCDILCR*KSIDLFRFVMFCIKL*QNL*RIG*KKILPLII 327
+ G+ ++ I L+PK R K+ FR + FC + + + + ++ PL++
Sbjct: 62 TFNMGSINASIAKTLIFLIPKKSNPQRLKN---FRPISFCNVIFKLITKFLVSRLRPLLV 118
Query: 328 D---ECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISKAYDRVNWEFLRG 384
D Q +F+PGR I+DN +A E++H I + G KID KAYDR NW+FL
Sbjct: 119 DMISPLQSSFIPGRGITDNAILAQEVVHFIHHSHAKKGCIVSKIDHEKAYDRHNWDFLEL 178
Query: 385 MMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGR 424
+ GF + M CV SVL NG + P R
Sbjct: 179 TLHGFGFPSTTISLNMSCVRSSNLSVLWNGVKTDHFTPSR 218
>IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26788772-26788104 H EGN_Mt090430 20090702
Length = 222
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
F+++ FP D L APLG PSYAWRSIH +I V+ +G W++GNGE+ V W+P +
Sbjct: 21 FKAKYFPQSDILQAPLGCNPSYAWRSIHNSIWVILKGSCWKIGNGESAKVWGDNWVPLHN 80
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIM 797
F + + V++L WD + LF + I IPI N D+ M
Sbjct: 81 GFKILTQKMEPFSIRHVKDLINMDSFSWDTEILNNLFLPIDKDHIEQIPIINTTNIDEYM 140
Query: 798 WHWDKKGIYSVRSGYYVAR-----RLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALR 852
W + G+Y+V+SGY + + D W K+W + P+ K +WR L+
Sbjct: 141 WMHEPTGVYTVKSGYKAIKEWQDQQFSSTASSSCDTQVWKKLWAIHTIPRHKVLLWRILQ 200
Query: 853 NVLPTKERLRRRGVEVDIGCP 873
N LP + L RGV I CP
Sbjct: 201 NSLPVRSELSNRGVPCSILCP 221
>IMGA|Medtr8g105650.1 reverse transcriptase, putative;
100033-105622, related chr08_pseudomolecule_IMGAG_V3
23385469-23384651 H EGN_Mt090430 20090702
Length = 244
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 30/268 (11%)
Query: 546 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPL 605
+P+ G+SK+ F F+ DR+ K++ W + LS + LI+++ QAIPTY MS F +P
Sbjct: 1 MPTHFGRSKEHDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAVAQAIPTYVMSCFLLPK 60
Query: 606 SM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEARVA 665
+ + E+V+ + G D K K + + +LF H
Sbjct: 61 GL---CEKIEKVVC----------AFWWGGTD---SKKKIHWTKRENLFKPRHKG----- 99
Query: 666 SYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETI 725
G + F + A LG PSYAWRSI +I V+++G W++GNG+ +
Sbjct: 100 ---GMGFKILRDFNMAMLA----KQANLGYSPSYAWRSIFHSIWVIQKGSCWKIGNGQKV 152
Query: 726 GVLSHPWMPRDHSFWVEDSRDFVDPNMK-VRELFVEGEGRWDVGKVMTLFSLREFRAILG 784
+ W+P H+F + + + +P++ V++L E W+ + T F + I
Sbjct: 153 RIWEDNWIPTHHNFRIF-TPNLGNPDVVLVKDLTNMDEPSWNNSILNTHFLSIDKDQIEC 211
Query: 785 IPISINANRDQIMWHWDKKGIYSVRSGY 812
IP+ AN D+IMWH+++ G Y+V SGY
Sbjct: 212 IPLINLANDDEIMWHFNQDGKYTVHSGY 239
>IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
3891819-3892634 H EGN_Mt090430 20090702
Length = 213
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 58/239 (24%)
Query: 333 AFVPGRLISDNVAVAFELIHNIKSR-KNQGGACALKIDISKAYDRVNWEFLRGMMLRMGF 391
FV R I +N AFE++H + + K + G LK+DI K +D VNW +L+ +++ M F
Sbjct: 28 TFVTSRSIMNNALSAFEILHFMCCKHKGKIGDVVLKLDIPKTFDTVNWSYLQDVVIIMDF 87
Query: 392 YEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDA 451
+W++W L+G + P P+S YL
Sbjct: 88 CTRWLQWK------------LHGIHICHKTP--------PIS-YLL-------------- 112
Query: 452 KRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNK 511
FADD+ F K + EA + +I+ E ASG+ IN +K
Sbjct: 113 ----------------------FADDNVHFCKTFVSEAPCLKNIISDIEAASGKTINFDK 150
Query: 512 SSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIG 570
I FS N+SR ++ +IS++L V SIGGG YLGLPS++ S K +F Q + +++
Sbjct: 151 LGISFSKNISRNVVNSISSLLGVNESIGGGEYLGLPSMVRHSNKIIFQLPQCKSMEKVS 209
>IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
6317912-6319402 H EGN_Mt090430 20090702
Length = 456
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 409 SVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPS 468
S+ +NG + G + RG+RQGDPLSP LF + LS G+++ +K R+
Sbjct: 2 SISINGSQRGYFKCARGVRQGDPLSPLLFCSAEEVLSRGILKLVDDGKVELIKASRDTQI 61
Query: 469 ITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIFFSPNMSRELMTNI 528
+H +ADD + KG L E + D+ +Y SGQ INL KS I FS +S ++
Sbjct: 62 PSHCFYADDLMVYCKGKLYSLEALKDLFTRYASCSGQVINLGKSFI-FSGGVSNNML--- 117
Query: 529 STILNVAG-SIG--GGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVL 585
ST++N+ G +IG TYLG P GK F + D+++ ++ +W LS A + L
Sbjct: 118 STMVNLLGFNIGSLSFTYLGAPIFKGKPNTIHFQPIADKIKLKLASWKAYLLSIAGRVQL 177
Query: 586 IKSITQAI 593
+KS+ Q +
Sbjct: 178 VKSVVQGM 185
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 12/195 (6%)
Query: 704 IHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEG 763
I +K+ W V NG+ I W + + S + + + +++
Sbjct: 252 IKQEFNTIKENTSWLVENGDNIQFWLDSWCRKPLIQALNLSLNQIQNLPQCISSYIQN-N 310
Query: 764 RWDVGKVMTLFSLREFRAILG-IPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGR 822
+WD + L ++ + R ++ + I + D+++W G S++ Y +
Sbjct: 311 QWDTPNEL-LHAMPDLRRLVTQVTIPVQQKEDELIWCHSTNGTLSMKEVY-------ESK 362
Query: 823 VHEIDGGWWGKM-WCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-ED 880
H W K+ W D P +WR + N LPT E L RG + C C ++ E+
Sbjct: 363 KHHYPKRKWAKLIWSKDYPPSKYLMVWRLMLNKLPTNENLTERGCNLPSMCSLCSKQSEN 422
Query: 881 INHAIVLCSKAKGVW 895
H C + +W
Sbjct: 423 SFHLYFECPYSFNIW 437
>IMGA|Medtr4g013050.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2458849-2459642 H
EGN_Mt090430 20090702
Length = 155
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 69/222 (31%)
Query: 334 FVPGRLISDNVAVAFELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFY 392
F+ R I DN + FE++H++K + LK+DI+KAY++++W +L+ +ML+MG
Sbjct: 2 FISKRSILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLS 61
Query: 393 EKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAK 452
+ VGPI GRGL Q DPL PYL++ CA+G S L + A+
Sbjct: 62 QSC-------------------NLVGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAE 102
Query: 453 RRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKS 512
RR SFF S
Sbjct: 103 RRA------------------INMASFF-------------------------------S 113
Query: 513 SIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSK 554
I++S ++ I+ IL V ++G G +LGLP +IGK+K
Sbjct: 114 KIYYSTTAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr4g012970.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2420499-2421292 H
EGN_Mt090430 20090702
Length = 155
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 69/222 (31%)
Query: 334 FVPGRLISDNVAVAFELIHNIK-SRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFY 392
F+ R I DN + FE++H++K + LK+DI+KAY++++W +L+ +ML+MG
Sbjct: 2 FISKRSILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLS 61
Query: 393 EKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAK 452
+ VGPI GRGL Q DPL PYL++ CA+G S L + A+
Sbjct: 62 QSC-------------------NLVGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAE 102
Query: 453 RRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKS 512
RR SFF S
Sbjct: 103 RRA------------------INMASFF-------------------------------S 113
Query: 513 SIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSK 554
I++S ++ I+ IL V ++G G +LGLP +IGK+K
Sbjct: 114 KIYYSTTAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr6g061920.1 RNA-directed DNA polymerase (Reverse
transcriptase); Deoxyribonuclease I
chr06_pseudomolecule_IMGAG_V3 11215607-11213885 H
EGN_Mt090430 20090702
Length = 405
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 117/281 (41%), Gaps = 28/281 (9%)
Query: 133 QIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVY 192
Q + WL D NSK+FH + R+R +L +E DG + + N+F Y
Sbjct: 144 QKSRLNWLREDDANSKFFHGIMSARRRGNALLFIE-VDGTRFEGVTNFRGAVFNHFQHHY 202
Query: 193 SAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQN 252
+ ++ + LT F EI+ A + KSPG +G++ F ++
Sbjct: 203 KSIYITRPSADDMAFKTMYVEDGGSLTGLFLEGEIKHAVWSCDSYKSPGANGISLNFIKD 262
Query: 253 FWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KSIDLFRFVMFCIKL*Q 312
FW ++ D+ R + K + I L+PK + Q
Sbjct: 263 FWGLLKGDMIRFFNDFHRHDRLSKGINSTFIALIPKV-----------------LVNRLQ 305
Query: 313 NL*RIG*KKILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISK 372
N I+ +I Q FV G I D + +A EL+ + RK K+D K
Sbjct: 306 N--------IIGSVISPSQTTFVSGCQILDGLLIANELVDDACKRKQD--LLLFKVDFEK 355
Query: 373 AYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLN 413
A+D V+W++L M+ RM F W KWM C++ SVL+N
Sbjct: 356 AFDSVDWKYLHTMLRRMNFPRLWCKWMWECISTPFVSVLVN 396
>IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 19990-20214 H
EGN_Mt090430 20090702
Length = 74
Score = 96.3 bits (238), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 417 VGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFAD 476
VG I PGRGLRQGDPLSPYLF+ CA+GLS L +R G L+G+ + + P+I HLLFAD
Sbjct: 2 VGLIIPGRGLRQGDPLSPYLFILCAEGLSTLIDKDERCGDLRGISICTHAPTICHLLFAD 61
Query: 477 DSFFFFKGSLQEA 489
D F FF+ + +EA
Sbjct: 62 DCFLFFRANEKEA 74
>IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
12035165-12036141 H EGN_Mt090430 20090702
Length = 250
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
++++ +P FL A LG SY WRSI A +++ G RWR+GNG+ I V + PW+ D
Sbjct: 40 YKAKYYPNTYFLGARLGHNQSYIWRSIFALQVLVRGGQRWRIGNGKNIAVWTDPWLREDK 99
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIM 797
+ V +R N+KV +L W+ G + LF+ ++ AI + ++ D+ +
Sbjct: 100 NSVVSSTRVQGTENLKVADLMDSNGVTWNWGLIAALFNEQDKAAIAKLALTNREGEDKRI 159
Query: 798 WHWDKKGIYSVRSGY-YVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLP 856
W ++ +G Y+V+S Y Y L+ + + W KM + + K F+WR LR+
Sbjct: 160 WKFNSQGFYTVKSAYRYAMETLIDNEEYRVPRE-WLKMLKMQIPQRIKVFLWRVLRD--- 215
Query: 857 TKERLRRRGVEVD--IGCPWCGEEEDI 881
GV++ + C WC + + +
Sbjct: 216 ------SEGVDLAMILWCLWCRQNDKV 236
>IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6753317-6752601 H EGN_Mt090430 20090702
Length = 238
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 549 LIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM* 608
+IG+SKK +F F++D++ ++I +W R LS+A KEV+IKS Q+IPTY MS+F IP S+
Sbjct: 1 MIGRSKKDMFKFIKDQVWRKINSWGGRSLSKAGKEVMIKSALQSIPTYFMSIFLIPSSLG 60
Query: 609 ND-AKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEARVASY 667
++ K G G R +S + + ++ GF+ +F +
Sbjct: 61 DEIEKMMNSFWWGNGGNRNKGIRWLSWYKLYVHKRSGGMGFKNLYMFNMALLGKQVWRLM 120
Query: 668 DGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGV 727
F+++ + D +A G SY W+SIH AI ++KQG RW++G + I V
Sbjct: 121 CQPELLIARLFKARYYQRNDIFEAKKGNNSSYVWKSIHEAIPMVKQGTRWKIGKKDKIRV 180
Query: 728 LSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDV 767
W+ + ++ + V+EL G+ WD+
Sbjct: 181 FQDRWL-MNGGLAQPAAQYNQLLQLNVKELLQPGQKSWDL 219
>IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse
transcriptase) CU179634.6 121572-121327 H EGN_Mt090430
20090702
Length = 81
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 367 KIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGL 426
K+DI KAYD +NW FL +M +MGF +W+KW+ C++ VK+SVL+N + G RGL
Sbjct: 3 KLDIQKAYDHLNWNFLLKLMEKMGFAFRWIKWIEHCISTVKFSVLINRETNGFFSSQRGL 62
Query: 427 RQGDPLSPYLFLFCAKGLS 445
RQGDPLSP+LF+ +G S
Sbjct: 63 RQGDPLSPFLFIMGMEGSS 81
>IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3
22005738-22006807 E EGN_Mt090430 20090702
Length = 168
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 708 IGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDV 767
+ +++ G RWR+GNG++I V + PW+ D KV +L + GE W+
Sbjct: 2 VVIVRGGQRWRIGNGKSIAVWTDPWLREDE---------------KVADL-MSGES-WNW 44
Query: 768 GKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEID 827
G + +F+ + +AI + + D+I+W +++ G Y+VRS Y A L V
Sbjct: 45 GMIAGIFNDHDRKAISNLALLNRDGEDRIIWKFNRYGNYTVRSAYRYAMETLVDNVEYRV 104
Query: 828 GGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEEEDINHAIVL 887
G W KMW L + K F+WRA+R LPT+ RL+ + V CP+C + N + +
Sbjct: 105 SGEWLKMWSLKIPQRIKVFLWRAVRGALPTRMRLQDKVVPCTDCCPFCETNYENNWHVFM 164
Query: 888 CSK 890
K
Sbjct: 165 GVK 167
>IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
21818522-21818196 H EGN_Mt090430 20090702
Length = 108
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 400 MLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQG 459
M+CV + YSVL+N + I GRGLR+GDPLS YLF+ C KG+S+L + R R+ G
Sbjct: 1 MMCVGSIFYSVLVNDETTNLIYLGRGLRKGDPLSLYLFILCMKGISMLMRQTYRGDRMHG 60
Query: 460 MKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKK 498
+++ RN P ++HLL + F F K + E E + +I K
Sbjct: 61 VQIFRNEPIMSHLLVVNGCFPFCKANCVEDENMKEIQTK 99
>IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
17724162-17724986 H EGN_Mt090430 20090702
Length = 274
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 698 SYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVREL 757
SY+WRS A V+++G W VGNG I + W+P + F V + KV +L
Sbjct: 22 SYSWRSFLQARWVIQKGSYWTVGNGNLINIWEDRWLPDQNGFKVFSKKPNNCDIQKVSDL 81
Query: 758 FVEGEGRWDVGKVMTLFSLREFRAILGIPISINANR-DQIMWHWDKKGIYSVRSGYYVAR 816
W+ + LF E I IP+ IN N D ++W G YSV+ GY+
Sbjct: 82 IDYTTLSWNTPLIHKLFLPFETDQIHQIPL-INTNEDDDLVWAHTNNGSYSVKYGYH--- 137
Query: 817 RLLRGRVHEIDGGWWGKMWCLD---------ASPKDK-DFMWRALRNVLPTKERLRRRGV 866
++ R + G C D P++K +WR + N LP K L + G+
Sbjct: 138 -FIKNREEQAQGQPGNSSTCCDPISKNLWNQTIPQNKIQLIWRIMNNGLPVKRNLMQCGI 196
Query: 867 EVDIGCPWCGEE-EDINHAIVLCSKAKGVW 895
D CP CG E I+H + CS + VW
Sbjct: 197 RCDPLCPGCGNHIESISHTFMQCSWVQRVW 226
>IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V3
5113686-5112454 H EGN_Mt090430 20090702
Length = 410
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 782 ILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEI------DGGWWGKMW 835
I IPI N+D++MW ++ GIYSV+SGY R + H + W K+W
Sbjct: 14 IEQIPIINTTNQDELMWMYELNGIYSVKSGYQAIRSWQIQQKHNTTPNCSSETTVWKKLW 73
Query: 836 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 894
L P+ K +WR L N LP + L +RG+ I CP C + E I H + C
Sbjct: 74 KLHTIPRHKVILWRILHNSLPVRSELNKRGIHCSILCPRCNSKMETITHTFMTCPNILRT 133
Query: 895 WRQGGYEV---GDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARN 940
W + N +F N+ + H D+ IW +RN
Sbjct: 134 WFGSSLTIKFPDQPNPNFVNWLFDFILHEDEQIIIQTAAIIYSIWFSRN 182
>IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40668899-40668561 H
EGN_Mt090430 20090702
Length = 112
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 436 LFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDI 495
LF+ CA+GLS+L + + RG + G+KV R P +THLLF DD F F + + +EA+ +++
Sbjct: 24 LFIICAEGLSVLLKKLEARGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEA 83
Query: 496 LKKYERASGQAINLNKSSI 514
LKKYE AS Q INL KS I
Sbjct: 84 LKKYEEASRQPINLQKSKI 102
>IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 31444078-31442691 H
EGN_Mt090430 20090702
Length = 404
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 710 VLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGK 769
V++ G RW +G+G I +++ PW+ D V L + W+
Sbjct: 2 VVRHGTRWIIGSGYDISMINEPWIGMGLRVPPAAPDDLSYQGYSVGHLIHQDVKTWNEPL 61
Query: 770 VMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGG 829
V+ +F + IL P+ + N D+++W +K G YSVRS Y V + H G
Sbjct: 62 VICIFEAGTAQQILNTPLFLQVNEDKLVWKPEKNGQYSVRSAYRVCVEEIADMSHLHTNG 121
Query: 830 WWGKMWCLDASPKDKDFMWRALRNVLPTK 858
+WG +W L PK K+ +WR R LPT+
Sbjct: 122 FWGGIWKLKVPPKVKNMLWRVCRECLPTR 150
>IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873419-31873604 H EGN_Mt090430 20090702
Length = 61
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 389 MGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLF 448
MGF +KW++WMM+CV+ YS+L+N VGPI GRGLRQGDPLS YLF A+GL L
Sbjct: 1 MGFDDKWIRWMMMCVSSATYSILMNFNRVGPIITGRGLRQGDPLSSYLFSMVAEGLCALI 60
Query: 449 Q 449
Sbjct: 61 H 61
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 42/297 (14%)
Query: 585 LIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGK 644
+IKS+ QAI +Y MS+F++P ++ + G R Q
Sbjct: 1 MIKSVLQAIMSYVMSLFQLPTTLITTIERMMNSFWWGHDRSTH-------------QSIN 47
Query: 645 WYGFQGSSLF*YGHASEARVASYDGARYSFF*TFQSQIFP**DFLDAPLGRRPSYAWR-- 702
W ++ S+ H S + D + ++ A LG++ W+
Sbjct: 48 WLSWEKLSM----HKSHGGMGFKDLSAFNL----------------AMLGKQ---GWKFL 84
Query: 703 ----SIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELF 758
S+ +++ RW + +G ++ +L P + S + F + KV+ L
Sbjct: 85 SDTNSLVTPRFIVRGRARWSISSGVSLPILDAPLLSNGESIDGSITEGFYVRDFKVQSLI 144
Query: 759 VEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRL 818
E R +V V +FS AIL P+ ++D+++W ++ G Y+VRS Y +
Sbjct: 145 SEHGKRRNVPLVRQVFSNDIVDAILNTPLYDQVHQDRLIWKAERNGCYTVRSAYRLCVEK 204
Query: 819 LRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWC 875
L + G W +W L PK K+ + R R LPT+ RL+ +GV C C
Sbjct: 205 LMDVSYLHRPGSWNNIWRLKVPPKVKNLLVRMCRGCLPTRARLQDKGVSCPTNCGSC 261
>IMGA|Medtr1g117580.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 25273871-25275952 H
EGN_Mt090430 20090702
Length = 663
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 81/147 (55%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
++++ F +FL+A +G +PS+ WRSI + +LK G RW++GNG +I V ++ WM +
Sbjct: 511 YKARYFSRCNFLEATIGHKPSFVWRSICNSKFILKAGSRWKIGNGTSIPVWNNYWMKDNV 570
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIM 797
+ + + N++V + + W++ + ++F+ + I+ P+ + + D+++
Sbjct: 571 TLYPLEDVASTLANLRVSDCILPNHKSWNLPFLHSVFNHQVVEHIINTPLFPSVHEDRLI 630
Query: 798 WHWDKKGIYSVRSGYYVARRLLRGRVH 824
W + G YSVRS Y++ L H
Sbjct: 631 WKKENNGEYSVRSAYHLCMNELLDTSH 657
>IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
8248910-8249829 H EGN_Mt090430 20090702
Length = 241
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 677 TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRD 736
F+S+ FP +L LG P++AWRSI + +L G R +GNG+ + V++ PW+
Sbjct: 11 VFKSRYFPHSSYLGPKLGYNPNFAWRSIWNSRQLLLYGCRCTIGNGQQVSVMNDPWVRGT 70
Query: 737 HSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQI 796
W++ + +++V +L V+ E WD+ K+ +LF +AIL P+ + D+I
Sbjct: 71 REKWIQSPQSQGVRSLRVSDLIVDEERVWDIDKLESLFPDDMVQAILDTPLFAEVHNDRI 130
Query: 797 MWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLP 856
W ++ G R +
Sbjct: 131 AWMKERSG-----------------------------------------------RGCVL 143
Query: 857 TKERLRRRGVEVDIGCPWCGE-EEDINHAIVLCS 889
T RL+ R V+ ++ CPWC ED HA V C+
Sbjct: 144 TCLRLQSRHVQCEVLCPWCDTVVEDDWHAFVGCT 177
>IMGA|Medtr6g070340.1 Endonuclease/exonuclease/phosphatase, putative
chr06_pseudomolecule_IMGAG_V3 13241205-13239102 H
EGN_Mt090430 20090702
Length = 201
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 138 RWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE* 197
WL GD N+K+FH + R+R I+KL+ ++G VQ +++ + N+F + +
Sbjct: 2 HWLKDGDANTKFFHDILAARRRGNSIVKLD-DNGSEVQGVENIRGVVFNHFKNHFRSVMV 60
Query: 198 VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVI 257
+ NL + + + L PF+L+E+++ +D KSP PDG+N F FW +
Sbjct: 61 DRLGAENLNFNMIGMFETSELVKPFSLEEVKQVVWDCDTFKSPWPDGINLGFLTEFWQEV 120
Query: 258 GDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCD 290
DD+ R ++ G + L + I L+PK +
Sbjct: 121 KDDLMRFFGEFHRKGRLSRGLNNTFIGLIPKVE 153
>IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial
chr05_pseudomolecule_IMGAG_V3 35125187-35123779 E
EGN_Mt090430 20090702
Length = 360
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 754 VRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYY 813
V++L + W+ + F E I +P++ N+D +MW + + G+YSV++GY
Sbjct: 2 VKDLLIGSPPDWNKKLIEDTFIPFEGIQIQQLPLTDKENQDSLMWMFSETGVYSVKTGYQ 61
Query: 814 VARRLLRGR-----VHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEV 868
+ R EI W K+W L P+ K +W+ + LP + L RG+
Sbjct: 62 AIQCWKNNRDQGPSSEEIMKTVWKKVWGLQTIPRHKVLIWKIINRALPVRSELINRGIRC 121
Query: 869 DIGCPWCGEE-EDINHAIVLCSKAKGVW--RQGGYEVGDINIS-FTNFFL*VLAHGDK-- 922
+ CP C E INH + C + W Q G + N++ F ++ + + + DK
Sbjct: 122 SLLCPRCDSTIETINHLFLNCEHTRREWFGSQLGINFQNENLTDFIDWLISFILNNDKST 181
Query: 923 IKSQHFLVYARYIWMARN 940
I + L+Y+ +W ARN
Sbjct: 182 IITMAALLYS--VWHARN 197
>IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt090430
20090702
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 764 RWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 823
R+ + ++ F +AI + + +D+++W +++ IY+VRS Y A + L V
Sbjct: 4 RYSLHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNV 63
Query: 824 HEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDIN 882
G W KMW L + K F+WRA+R V PT+ R++ +GV CP+C E+
Sbjct: 64 EYRILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDW 123
Query: 883 HAIVLCSKAKGVWRQGG 899
H + C + K +WR G
Sbjct: 124 HVFMGCEEVKTIWRTTG 140
>IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt090430
20090702
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 764 RWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 823
R+ + ++ F +AI + + +D+++W +++ IY+VRS Y A + L V
Sbjct: 4 RYSLHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNV 63
Query: 824 HEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDIN 882
G W KMW L + K F+WRA+R V PT+ R++ +GV CP+C E+
Sbjct: 64 EYRILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDW 123
Query: 883 HAIVLCSKAKGVWRQGG 899
H + C + K +WR G
Sbjct: 124 HVFMGCEEVKTIWRTTG 140
>IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 40910518-40909919 H
EGN_Mt090430 20090702
Length = 199
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 563 DRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGE 622
DR+ K++ W + LS + VLI+++TQ IPTY MS F +P + K + V
Sbjct: 2 DRIWKKLKGWKEKSLSFEGRGVLIRAVTQVIPTYYMSCFLLPKGL--CEKIERVVCSFWW 59
Query: 623 GRRA*RDSLVSMGEDVL*QKGKWYGFQGSSLF*YGHASEARVA--SYDGARYSFF*TFQS 680
G + + +++L + G SL + A A+ + F+S
Sbjct: 60 GSTNTKKKIHWKNKEILFKFKHDGGMVFKSLRDFNIAMLAKQVWRFHTNLNTLIAKCFKS 119
Query: 681 QIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFW 740
+ +P D L+A LG P+YAWRSI AI + +G WRVG G+ I + W+P HS
Sbjct: 120 KYYPHTDILEADLGNNPNYAWRSIQNAIWPILKGSCWRVGKGDNIRIWDDNWIPTYHSLR 179
Query: 741 VEDSRDFVDPNMKVRELF 758
V + + KV++L
Sbjct: 180 VLNPKRNNPHINKVKDLI 197
>IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
42636230-42638565 E EGN_Mt090430 20090702
Length = 167
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 114 QRLKNEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDI 173
+ L+NE+N +L +E+ Q ++ W+ + ++N+K+FH R+RR K+ L N DG
Sbjct: 22 RHLQNEYNKVLAQEKMLWYQKSRENWIKFENKNTKFFHVQTVIRRRRNKVAGL-NIDGIW 80
Query: 174 VQDNDSLEQITLNYFSTVYSAEE*VGIEIFNLVQ-PKVTAIQNNILTAPFTLDEIREAAF 232
+ DSL + L+YF +++ + P ++ N L +L+E++ + F
Sbjct: 81 CINEDSLRREALSYFRSLFQEGGPTSPSSLHFSHFPHISIDLYNSLCLNPSLEEVKFSLF 140
Query: 233 DMQPDKSPGPDGLNPAFFQNFWHVIGD 259
M K+PG DG P FF+ FW+++
Sbjct: 141 SMNSYKAPGQDGFQPIFFKTFWNIVSS 167
>IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26368918-26367637 H EGN_Mt090430 20090702
Length = 409
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 23/241 (9%)
Query: 710 VLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGK 769
+++ G RW++GN I + PW+ V N++V L + W+
Sbjct: 2 IVRSGARWKIGNNINIPMFEAPWLRNGGVISGVGQSSDVLQNVRVHSLIDQNTNGWNYNM 61
Query: 770 VMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGG 829
V F + I+ PI D ++W +K G YSV+ + G
Sbjct: 62 VNYYFDYDTVQEIIRTPIFHQVEEDALIWKAEKNGHYSVK--------------RQAVGI 107
Query: 830 WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGE-EEDINHAIVLC 888
+G K +F+WR R+ LPT+ RL +GV C C E ED H + C
Sbjct: 108 AFGDS---KVPLKVNNFLWRVCRDCLPTQARLLDKGVNCTYLCGLCEECYEDTTHVLFDC 164
Query: 889 SKAKGVWRQGGY--EVGDINISFTN---FFL*VLAHGDKIKSQHFLVYARYIWMARNNAL 943
KA+ VW +V + ++ L +L K K + F + +W +RN +
Sbjct: 165 PKARNVWLNCSMVDKVSSVMLNHNTAAEIILALLKELTKEKFEQFAMNLWSLWKSRNLRI 224
Query: 944 W 944
W
Sbjct: 225 W 225
>IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
10317892-10316821 H EGN_Mt090430 20090702
Length = 341
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 107/273 (39%), Gaps = 31/273 (11%)
Query: 677 TFQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRD 736
+S FP +FL A +G P + WRSI A L W+P
Sbjct: 32 CLKSHYFPRCNFLQAGIGFNPGFTWRSIVQA-------------------RLEDIWLPHQ 72
Query: 737 HSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQI 796
+ + + V EL E GRW+ V F + + IL IP+ + +D
Sbjct: 73 YGHKLWSPKPSGSNIHLVAELIHEECGRWNAHLVNEFFLPFKAQQILQIPVFPSQQQDCF 132
Query: 797 MWHWDKKGIYSVRSGYYVARR--LLRGRVHE-IDGGWWGKMWCLDASPKDKDFMWRALRN 853
+W +K ++ + RR L H + G W K+W + P+ +W L N
Sbjct: 133 IWAVNKNDEFT---EFLKERRERLNSNYSHSSLQNGVWNKLWRVKTIPRHTHLIWCILHN 189
Query: 854 VLPTKERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYE-VGDIN----I 907
LP + L RGV+ C C ++E INH + C +K VW + DIN I
Sbjct: 190 WLPVRSALFNRGVQCSPLCCLCDQQQESINHLFMECGWSKAVWFASPLSLIFDINGGEQI 249
Query: 908 SFTNFFL*VLAHGDKIKSQHFLVYARYIWMARN 940
F+ + V+A+ + Q +W N
Sbjct: 250 LFSIWLEHVVAYENNCTIQLIFAICYGLWTLLN 282
>IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1330505-1330813 H EGN_Mt090430 20090702
Length = 102
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 543 YLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFK 602
YLG+P+ +G++K+QVF FLQDR+ K++ W R LS A + VLIK + +AIPTY MS F
Sbjct: 10 YLGMPTGMGRNKRQVFEFLQDRIWKKLKGWKERNLSFAGRSVLIKVVAEAIPTYIMSGFL 69
Query: 603 IPLSM*ND 610
+P S N
Sbjct: 70 LPKSFCNQ 77
>IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related
chr01_pseudomolecule_IMGAG_V3 1363994-1362753 E
EGN_Mt090430 20090702
Length = 180
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 143 GDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLN----YFSTVYSAEE*V 198
GD N+K FHAS R K++ ED + V+ ++ I+ +FS ++ + V
Sbjct: 7 GDLNTKCFHAS---ALLREKLILSYFEDANEVRAQ--MKYISSMWPKIHFSGLFQVTDSV 61
Query: 199 GIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIG 258
+ N ++ +N L PF ++E +E F + DK PG G N F+Q+FW +
Sbjct: 62 RASVINATNQVISEDENTYLVVPFCVEEFKEEMFSLLADKCPGSKGFNLGFYQHFWQICS 121
Query: 259 DDIWRDSKQWLDTGTFPKTLTDIHIVLLPK 288
DI+ + WL +L ++ L PK
Sbjct: 122 FDIFWEYCYWLTNFQISASLNSTNMTLTPK 151
>IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16025455-16024014 E EGN_Mt090430 20090702
Length = 70
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 423 GRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFF 482
GR LRQ DPLSP+LF+ CA+GLS L ++A+ + G P + HLLFADD F FF
Sbjct: 6 GRSLRQADPLSPHLFIICAEGLSSLIREAEVGEIISGTSTCSGAPLVFHLLFADDCFLFF 65
Query: 483 KG 484
K
Sbjct: 66 KA 67
>IMGA|Medtr4g114300.1 Hemopexin, related, related
chr04_pseudomolecule_IMGAG_V3 26096856-26098250 H
EGN_Mt090430 20090702
Length = 256
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 30/175 (17%)
Query: 2 WSSMYVNALAKIITAPVSDHAPLFI-QLNYQQVDNNYRRFRFDNSWVGERELDQLVKDVW 60
W M+ N + + AP SD PL + Q + V ++F+F+N+W E + +V D W
Sbjct: 22 WFRMFPNVTVENLMAPASDRYPLLLKQKETRCVWVPRKKFQFENAWCVEPGIHDIVSDSW 81
Query: 61 CNNDSGTLLHKRDVCIKEMEKWGRQFNKIFWKKKRILKQRIANARDVFDDVTVQRLKNEW 120
++ ++ K +VC ++ W + N LKQ I N R +
Sbjct: 82 LSSTCMQVVEKLEVCANDLNSWSKAHNN-------GLKQEIENCRCDLN----------- 123
Query: 121 NTILFKEECRMRQI----RKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDG 171
CR R K W + GD N+KYFHAS +RK+ L+N +G
Sbjct: 124 -------RCRSRGAAAYPTKTHWYHDGDLNTKYFHASTTSRKKVNPHYVLDNNEG 171
>IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
25622719-25621333 H EGN_Mt090430 20090702
Length = 441
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 11/215 (5%)
Query: 696 RPSYA--WRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMK 753
RPS + W SI A VLK G WRVG+ + S PW + D D +
Sbjct: 29 RPSVSVIWSSILHARDVLKDGFSWRVGSDNS-SFWSCPWSSLGILGRIPPYIDIHDLQLT 87
Query: 754 VRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINAN-RDQIMWHWDKKGIYSVRSGY 812
V+++ ++ + T I I NA+ D +WH +K G Y+ +SGY
Sbjct: 88 VKDVISSNNPHTNI--LYTQLPPFAADTINNIHFKFNASVEDTFIWHNNKNGTYTPKSGY 145
Query: 813 --YVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDI 870
++R+ L + W +W L K K F W A N +PT L R +
Sbjct: 146 SWLLSRKELVIISNPPPSCSW--IWKLHMPEKIKLFFWLACHNSVPTLSMLNHRNIAPSP 203
Query: 871 GCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGD 904
C CG +E H + C+ +K +W++ G+ D
Sbjct: 204 VCSRCGLHDETFLHCVRDCAHSKSIWQRIGFIHND 238
>IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40774925-40774579 H
EGN_Mt090430 20090702
Length = 77
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 454 RGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSS 513
RG + G+KV R P +THLLF DD F F + + +EA+ +++ LKKYE AS Q INL KS
Sbjct: 9 RGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEALKKYEEASRQPINLQKSK 68
Query: 514 I 514
I
Sbjct: 69 I 69
>IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
18011505-18012272 H EGN_Mt090430 20090702
Length = 179
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 783 LGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVH---EIDGGWWGKMWCLDA 839
L + + + R+ ++W+ +K G YSVRS Y + + H +DG W L
Sbjct: 29 LSLAVILFCIRNMLIWNTEKNGNYSVRSAYRICVTKIADNTHLHVSVDGN---LSWKLKV 85
Query: 840 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 897
PK K+F+WR R PT+ RL GV I C C ED H +V C K VWR
Sbjct: 86 PPKVKNFVWRVRRGCFPTRARLSSGGVAYPIDCVTCDSNYEDSIHVLVECPKVVQVWRN 144
>IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-20266,
related chr01_pseudomolecule_IMGAG_V3 17930727-17931209
H EGN_Mt090430 20090702
Length = 160
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 97 LKQRIANARDVFDDVTVQRLKNEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKN 156
LK +I +A+ ++ ++ N +L +EE Q K +WL +GD N+K+FH
Sbjct: 3 LKNKIPDAKV---KSQIKEIETNLNDVLLQEEVWWAQRAKTQWLKYGDNNTKFFHFKASQ 59
Query: 157 RKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE*VGIEIFN---LVQPKVTAI 213
RK++ I + +++G D+ + I NYF+ ++S E+ N ++ +V
Sbjct: 60 RKKKNYIYSITDKNGREWNDDIHIHDIFTNYFADIFSTSH--PTEVHNNLDVISNRVPTD 117
Query: 214 QNNILTAPFTLDEIREAAFDMQPDKSPGPDGL 245
+ L+A FT++E+ M+ +PG DG+
Sbjct: 118 RQAELSADFTIEEVEATMKSMKATSAPGLDGI 149
>IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3173721-3173118 H EGN_Mt090430 20090702
Length = 143
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 794 DQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRN 853
D+++W D G+YSVRSGY +A R + H G W +W + A K ++ +WR
Sbjct: 18 DKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGEWNAIWKVQAPHKARNLLWRICWG 76
Query: 854 VLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVWRQGG 899
+PT+ +L +R V C WC EE+ N HA V A+ W G
Sbjct: 77 CIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESWFFSG 123
>IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3148938-3149541 H EGN_Mt090430 20090702
Length = 143
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 794 DQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRN 853
D+++W D G+YSVRSGY +A R + H G W +W + A K ++ +WR
Sbjct: 18 DKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGEWNAIWKVQAPHKARNLLWRICWG 76
Query: 854 VLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVWRQGG 899
+PT+ +L +R V C WC EE+ N HA V A+ W G
Sbjct: 77 CIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESWFFSG 123
>IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
17349249-17348078 H EGN_Mt090430 20090702
Length = 340
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 827 DGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAI 885
D W K+W L P+ K+F+WR + N LP + L +RG++ CP C + EDINHA
Sbjct: 31 DTTIWKKLWALKTIPRHKNFLWRVINNSLPLRSELGKRGIQCSPLCPHCNSKIEDINHAF 90
Query: 886 VLCSKAKGVWRQGGYEVGDINISFTNF---FL*VLAHGDKIKSQHFLVYARYIWMARN 940
+ CS VW + TNF + H + + +IW RN
Sbjct: 91 MTCSYITRVWFGSQLNINIDKSPITNFSDWISYAIEHNEPDITIQIADLTYHIWFDRN 148
>IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34427458-34427919 H EGN_Mt090430 20090702
Length = 153
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 710 VLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGK 769
++KQG RWR+G+G+TI +L PW+ S +++ ++KV + W+
Sbjct: 2 MVKQGARWRIGSGDTIPLLDAPWLKDGRSLTMDNPMYAPLSHVKVPNIIEPSTKVWNTTL 61
Query: 770 VMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGG 829
+ +F+ + IL P+ + D++ W +K G YSV S Y + + + H
Sbjct: 62 ISNMFNHNTTQLILNTPLQPLVHEDKLTWKAEKNGNYSVSSAYRICVTEIADKSHLHIPA 121
Query: 830 WWGKMWCLDASPKDKDFMWRALRNVLP 856
W L P ++F+WR + +LP
Sbjct: 122 RWNLTRKLKVPPMIRNFVWR-VSGLLP 147
>IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
32701852-32701244 H EGN_Mt090430 20090702
Length = 202
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 782 ILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASP 841
I +P+ + D I+W+ G Y+++S Y + + R + G W +W L +P
Sbjct: 9 ICRLPLHSRTHSDTIIWNASPNGSYTIKSAYKMCVSISDQRSNYHVSGDWKLIWSLCVAP 68
Query: 842 KDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGY 900
K K F WR LR LPT+ L+ GV C C + ED H + C A W+
Sbjct: 69 KIKHFCWRLLRGCLPTRSNLQSCGVHCQSTCVVCNRDLEDEMHMFMHCKFATDCWKAANL 128
Query: 901 -----EVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMA 938
N SF++ +L + F+ R IW A
Sbjct: 129 WSKIASYMTSNGSFSSIMFAILRSLEVDNHVGFVAILRSIWCA 171
>IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
2418197-2417610 H EGN_Mt090430 20090702
Length = 174
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 386 MLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLS 445
MLR+ F +W +W+ +CV SVL+NG + GL+Q DPL+ +LFLF +GLS
Sbjct: 1 MLRLRFPHRWCRWIRVCVFYGSLSVLVNGCPTEEVDIQGGLKQCDPLALFLFLFVVEGLS 60
Query: 446 LLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQ 505
L + A+ G KV ++ + + IL+ +E +SG
Sbjct: 61 GLVRLAEATSLFHGFKV---------------------TTMANLQALKTILRCFELSSGL 99
Query: 506 AINLNKSSIFFSPNMSRELMTNISTILNVAGSIGGGTYLGLP 547
+N +K S+F N+ E + L TYL LP
Sbjct: 100 KVNFSK-SLFMGVNVGPEFLGMAERFLYCRIGSVPFTYLKLP 140
>IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26300425-26300964 H EGN_Mt090430 20090702
Length = 179
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 585 LIKSITQAIPTYCMSVFKIPLSM*NDAKNDEQVMVGGEGRRA*RDSLVSMGEDVL*QKGK 644
+IK + Q+IP+Y MS++ +P S+ +D + G GR R E V K
Sbjct: 1 MIKYVLQSIPSYIMSIYLLPNSVIDDIEKMINAFWWG-GRSNNRGIKWMAWERVACPKE- 58
Query: 645 WYGFQGSSLF*YGHASEARVASYDGARYS-----FF*TFQSQIFP**DFLDAPLGRRPSY 699
F G + + A VA + S F+S+ FP FL A LG PS+
Sbjct: 59 ---FGGMRFRNFKAFNIAMVAKQGWSFLSKPDSLVARIFKSRYFPRSSFLGAKLGNNPSF 115
Query: 700 AWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVRELFV 759
AWRSI + +L G RW +G+G+ + V++ PW+ H W++ + ++ V +L
Sbjct: 116 AWRSIWNSCQLLLYGCRWTIGDGQQVSVMNDPWVRGVHGSWIQSPQGQDVHSLPVSDLIA 175
Query: 760 EGE 762
+ E
Sbjct: 176 DEE 178
>IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fold
AC225507.11 35556-36938 E EGN_Mt090430 20090702
Length = 358
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 797 MWHWDKKGIYSVRSGYYVARRLLRGR-----VHEIDGGWWGKMWCLDASPKDKDFMWRAL 851
MW + G Y+V+SGY + + W K+W L P+ K +WR L
Sbjct: 1 MWMYSNNGNYTVKSGYEALQSWKNNSNPGPSTSSQNNNIWKKLWALHTIPRHKMIVWRIL 60
Query: 852 RNVLPTKERLRRRGVEVDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGYEV---GDINI 907
N LP + L +RGV CP C E NH + C + + VW + + I
Sbjct: 61 HNTLPVRTELNKRGVNCPPLCPRCYSNLETTNHIFMSCERTQRVWFGSQLSIRFPDNSTI 120
Query: 908 SFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNAL 943
+F+++ +++ + IW ARN A+
Sbjct: 121 NFSDWLFDAISNQTEEIIIKISAITYSIWHARNKAI 156
>IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
31944726-31943241 H EGN_Mt090430 20090702
Length = 351
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 700 AWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMK-VRELF 758
AWR L++G WR+GNG +I + W+P ++ F S + +PN++ V++LF
Sbjct: 66 AWRFYTQPHSNLQKGGCWRIGNGHSIKIWEDNWIPSNNDF-KTISPNIGNPNIQLVKDLF 124
Query: 759 VEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYV--AR 816
++ WD + F + I IPI + D+ MW ++ G+YSV++GY + +R
Sbjct: 125 LQDGSGWDTDLIKNNFLHIDRDNITQIPIINTSKNDEYMWMHEQNGVYSVKNGYQILQSR 184
Query: 817 RLLR 820
+ +R
Sbjct: 185 KSIR 188
>IMGA|AC233676_33.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233676.2 127681-128151 H
EGN_Mt090430 20090702
Length = 156
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 218 LTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKT 277
LT PFT++ + + +D K P PDG+N +F ++FW + DD R ++ G +
Sbjct: 10 LTKPFTVEVVMQVVWDCDRYKIPRPDGINLSFIKDFWPKLQDDFMRFISEFHRNGKLSRG 69
Query: 278 LTDIHIVLLPKCDILCR*KSIDLFRFVMFCIKL*QNL*RIG*KKI---LPLIIDECQCAF 334
+ + I L+PK + R ++ FR + L + + ++ ++ +P II E Q AF
Sbjct: 70 INNTFIALIPKVESSQR---LNDFRPISMVESLYKVISKVITNRLCQDMPGIISEMQSAF 126
Query: 335 VPGRLISDNVAVAFELIHNIKSRK 358
+ GR I D + +A EL+ K K
Sbjct: 127 IHGRQILDEILIANELVEEAKRLK 150
>IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 20356-20538 H
EGN_Mt090430 20090702
Length = 60
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 538 IGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTY 596
+G YLGLPS++G+SK+ FGF++DR+ +I +WS++ L + +EV+IK + Q IP+Y
Sbjct: 1 MGTCKYLGLPSMMGRSKEATFGFIKDRIWHKINSWSSKCLFKVSREVMIKPVLQFIPSY 59
>IMGA|AC233571_22.1 hypothetical protein AC233571.2 95791-97088 H
EGN_Mt090430 20090702
Length = 158
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 377 VNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYL 436
VN F + GF + W++WMM+CV+ + YS+L VG I GRG+ QG PLS YL
Sbjct: 83 VNRRFFYMSTVSRGFGDTWIRWMMMCVSFITYSILRKFDRVGHIILGRGIPQGAPLSTYL 142
Query: 437 FLFCAKGLSLL 447
F+ +G LL
Sbjct: 143 FILVTEGKRLL 153
>IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 24592281-24593243 H
EGN_Mt090430 20090702
Length = 320
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 840 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQG 898
S K K F+WRA+R VLPT+ RL+ +GV CP+C E+ H + C + K VWR
Sbjct: 10 SAKGKFFLWRAVRGVLPTRMRLQDKGVPCTDCCPFCETNYENDWHVFMGCEEVKTVWRTA 69
Query: 899 GY-----EVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
G E+ SF N F +L K + + IW RN+ +W
Sbjct: 70 GLCDLIAEIVADAASFANCFFSLLCRLTTNKCKDMTMILWCIWRRRNDKVW 120
>IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related
chr04_pseudomolecule_IMGAG_V3 7955036-7954024 H
EGN_Mt090430 20090702
Length = 320
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 17/251 (6%)
Query: 698 SYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDFVDPNMKVREL 757
S W + ++ RW +GNG+ I + WM + + P++K
Sbjct: 44 SSIWLGVKDKFSMVSANTRWIIGNGDNIRLWFDNWM-GSPLVTILALPPHLFPSLKATLA 102
Query: 758 FVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARR 817
FV +G+W++ +++ F L + IL + + ++ D+ +W G S + +A +
Sbjct: 103 FVINDGKWNIPRIILDFPLVAAQ-ILQVTLPVSPLPDKCVWLHSHDGELSSK----LAFQ 157
Query: 818 LLRGRVHEIDGGWWGKMWCLDASPKDKDFM-WRALRNVLPTKERLRRRGVEVDIGCPWC- 875
L +D W + P F+ WR + + LPT E L+ RG + CP C
Sbjct: 158 FLNPAPPNLD---WAAVIRRPCIPPSHSFIFWRFMLSKLPTDENLQLRGCTLVSMCPLCY 214
Query: 876 GEEEDINHAIVLCSKAKGVWRQGGYEVG-DINISFTNFFL*VLAHGDKIKSQHFLVYA-- 932
+ E H + C+ +K +W G ++ I ++ + L + + + LV A
Sbjct: 215 NQAESSTHLFLECAFSKTIWNWLGIKLQRSIPLASPSSLLSFIPQRCSSQLRDVLVAAIV 274
Query: 933 ---RYIWMARN 940
IW+ARN
Sbjct: 275 HSVHAIWLARN 285
>IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
12265782-12266442 H EGN_Mt090430 20090702
Length = 195
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
++++ FP +FL+A LG PS+ WRSI + +L+ G RW++G+G +I V ++ WM +
Sbjct: 82 YKARYFPRCNFLEAELGHNPSFVWRSICKSKFILRAGSRWKIGDGTSISVWNNYWMKDNV 141
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKV 770
+ + D N++V + + + WD K
Sbjct: 142 TIFPLDDVATTLANLRVSDCLLPNQKSWDCVKT 174
>IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
17409058-17408195 H EGN_Mt090430 20090702
Length = 228
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 356 SRKNQGGACALKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGK 415
SRK+ G LK+D AYD VNWE GF E W +W+ + + V +NG
Sbjct: 21 SRKSGRGLMMLKVDFKTAYDSVNWE---------GFSETWRQWISTYLASSRVPVQVNGI 71
Query: 416 EVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGR 456
+GLRQG P SP+ FL A+ L++ ++ +R R
Sbjct: 72 STDKFSIPQGLRQGYPSSPFQFLIVAEELNVTKKNCRRTKR 112
>IMGA|Medtr2g114260.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 26977303-26977923 H
EGN_Mt090430 20090702
Length = 178
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 530 TILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSI 589
+IL + S YLG+ + G+SK+Q F FL+DR+ K++ W + +S + LI+++
Sbjct: 9 SILPIKISTSIQKYLGITTHFGRSKEQDFNFLKDRIWKKLKGWKEKSVSFEGRAFLIRAV 68
Query: 590 TQAIPTYCMSVFKIP 604
QAIPTY MS F +P
Sbjct: 69 AQAIPTYIMSCFLLP 83
>IMGA|Medtr2g085670.1 Endonuclease/exonuclease/phosphatase
chr02_pseudomolecule_IMGAG_V3 19361131-19359840 H
EGN_Mt090430 20090702
Length = 402
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 2 WSSMYVNALAKIITAPVSDHAPLFIQLNYQQVDNNYRRFR---FDNSWVGERELDQLVKD 58
W Y A +T SDH PL ++L ++ +R + F++ W+ +R + VK+
Sbjct: 210 WRFTYPTASVSHLTRYFSDHMPLLLRLGPRKPKMRRQRIKVLHFEDWWLRDRHITDAVKE 269
Query: 59 VWCNNDSGTLLHKRDVCIKEMEKWGRQ-FNKIFWKKKRIL--KQRI--ANARDVFDDVTV 113
W NN+ + +K C+K++ +WG+ F I KRI+ K+R+ N R D + +
Sbjct: 270 GW-NNEENNIHNKNSSCVKDLTEWGKDGFGDI---SKRIVNTKKRLDELNGRSRQDGIII 325
Query: 114 QRLKNE--WNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDG 171
+ + + + +L EE Q + WL GD+N+ +FH RK + + ++ G
Sbjct: 326 EIRRQQVILDDLLESEEIWWAQRSRAMWLKHGDKNTSFFHQKASQRKAKNWAETIIDDHG 385
Query: 172 DIVQDNDSLEQIT 184
+ D + ++
Sbjct: 386 KVFTDEKEIARVV 398
>IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, related
chr04_pseudomolecule_IMGAG_V3 32379758-32380006 H
EGN_Mt090430 20090702
Length = 82
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 440 CAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKY 499
CA GLS L +++ G + +KV R P +THLL F F++ +L E+ ++ ++L Y
Sbjct: 2 CAVGLSALLKESGGSGDIHDIKVCRGAPILTHLLLLMIDFLFWRANLSESTKIKEVLCYY 61
Query: 500 ERASGQAINLNKSSIF 515
+ SG+AIN KS I
Sbjct: 62 KAVSGKAINFQKSKIL 77
>IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5450314-5449526 H EGN_Mt090430 20090702
Length = 117
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 794 DQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRN 853
DQ++W +K G YSV++ Y + + H WG +W L PK K+ +WR R+
Sbjct: 10 DQLIWRLEKNGQYSVKTAYRLCMENIADNSHLYRIENWGSIWKLKVPPKVKNLLWRICRD 69
Query: 854 VLPTKERLRRRGVEV 868
LPT+ RL +GV V
Sbjct: 70 CLPTQARLLDKGVTV 84
>IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 20655028-20657384 H
EGN_Mt090430 20090702
Length = 376
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 808 VRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVE 867
V+S Y + L H G W +W L PK ++ +WR R L T+ RL +GV+
Sbjct: 30 VKSAYRLCVEELIDASHLRRPGNWSSIWKLKVPPKVRNLIWRICRLCLSTRIRLHDKGVQ 89
Query: 868 VDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGY--EVGDINISFTNFFL*VLAHGDKIK 924
C C ED+ H CS A VWR G +V N + + V A D +
Sbjct: 90 CPTQCVSCESSHEDMAHLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDMLT 149
Query: 925 SQHFLVYARYIW 936
++ +V+A +W
Sbjct: 150 TKQRVVFAATVW 161
>IMGA|Medtr6g009380.1 hypothetical protein
chr06_pseudomolecule_IMGAG_V3 1542043-1542210 H
EGN_Mt090430 20090702
Length = 55
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 385 MMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLF 439
MM+ + F+ +W + +C+ + Y +L+NG+ G + P RGL+QGDPLS YLF+
Sbjct: 1 MMINLCFHNRWANTISICMESIYYQMLVNGEREGHVVPKRGLKQGDPLSRYLFIL 55
>IMGA|Medtr7g089950.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 19938157-19937405 H
EGN_Mt090430 20090702
Length = 97
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 226 EIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVL 285
E R+ F M DKSPG +GLN FFQ W +IG +I+ WLD +F L D + L
Sbjct: 22 EFRQPVFSMHLDKSPGSNGLNSGFFQKIWPLIGTEIFETRCLWLDACSFSPNLNDTSVAL 81
Query: 286 LPKCD 290
+ + D
Sbjct: 82 IARAD 86
>IMGA|Medtr3g076330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
17637941-17639415 E EGN_Mt090430 20090702
Length = 123
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 126 KEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITL 185
K C+ + +WL GD NSK+FH + +R+ I + ED I + + +
Sbjct: 6 KRTCQSLNQSRSQWLREGDANSKFFHFIMFSRRHFNTICSVLVEDVRI-EGVEPVRNAIF 64
Query: 186 NYFSTVYSAEE*VGIEIFNLVQPKVTAIQNNILTAPFTLDEIREAAFDMQPDKSPGPDG 244
+F+ + ++ V I NL ++ L PF++DE++EA +D KSPGPDG
Sbjct: 65 THFAQHFKSQNVVRPSISNLRFRVLSVTAGGGLIKPFSVDEVKEAIWDCDSYKSPGPDG 123
>IMGA|Medtr1g008260.1 RNA-directed DNA polymerase, putative
chr01_pseudomolecule_IMGAG_V3 642619-642876 H
EGN_Mt090430 20090702
Length = 85
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 215 NNILTAPFTLDEIREAAFDMQPDKSPGPDGLNPAFFQNFWHVIGDDIWRDSKQWLDTGTF 274
+N L A +T++E+ EA ++ +PGPDG+ F+Q FW+VIG DI + L+ G
Sbjct: 2 SNFLEADYTINEVIEATQQLKGSSAPGPDGITALFYQIFWNVIGQDILDYTLNILNKGGN 61
Query: 275 PKTLTDIHIVLLPK 288
P + + L+PK
Sbjct: 62 PGQINHTFLSLIPK 75
>IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
39513788-39514207 H EGN_Mt090430 20090702
Length = 139
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 785 IPISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGK-MWCLDASPKD 843
+P+ D MW + K IYSV+SGY R + R + +W L+ P+
Sbjct: 28 LPLIKEDIEDIFMWMYTKDNIYSVKSGYNFIREWYQNRGQRTSNNTANQTIWNLNTIPRH 87
Query: 844 KDFMWRALRNVLPTKERLRRRGVEVDIGCPWC-GEEEDINHAIVLC 888
KDF+ R L + +P + L +G+ D+ CP C + E +NH I+ C
Sbjct: 88 KDFLGRILNDPVPVRYALHLKGLLNDMLCPRCVTKMETLNHVIMEC 133
>IMGA|Medtr2g114250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26976018-26976599 H EGN_Mt090430 20090702
Length = 193
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 35 NNYRRFRFDNSWVGERELDQLVKDVWCNNDSGTLLHKRDVCIKEMEKWGRQFNKIFWKKK 94
N+ + F+ W + + ++K W NN T + K + + WGR K
Sbjct: 15 NHKKLIIFEQPWAQDAWSNTILKTAW-NNTQSTNIVKLQHTLDHLYAWGRNKFCDLANKI 73
Query: 95 RILKQRIAN------ARDVFDDVTVQRLKNEWNTILFKEECRMRQIRKQRWLYWGDQNSK 148
+I++ + ++D + V ++ + L +EE Q K WL GDQN+K
Sbjct: 74 KIIQTSLDKLKTQVPSQDCIKQIKV--METTLDEYLKQEELWRTQRAKVHWLQHGDQNTK 131
Query: 149 YFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEE*VGIEIFNLVQ 207
FH + RKR+ I +++ DG+ Q+ + I NYF ++ + FN+ Q
Sbjct: 132 IFHYKVSQRKRKNTITSIQDPDGNSWQETYKIYSIFSNYFQNIFDS--------FNITQ 182
>IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
33033257-33037285 E EGN_Mt090430 20090702
Length = 178
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 797 MWHWDKKGIYSVRSGYYVARRL-LRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVL 855
MW D G+Y+VRSG RL + G+ H G W +W PK ++ WR R L
Sbjct: 1 MWLADMSGVYTVRSGCNFGMRLAVEGKNHVT--GDWSSLWHTRVPPKTRNLAWRICRRCL 58
Query: 856 PTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVW 895
PT+ RL R V+ + C C ++ D + H + C W
Sbjct: 59 PTRRRLHERRVQGPLNCAVCEDQVDDDWHLLFHCKTMAEYW 99
>IMGA|Medtr8g133770.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 31993480-31994567 H
EGN_Mt090430 20090702
Length = 318
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 780 RAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVAR-RLLRGRVHEIDGGWWGKMWCLD 838
+AIL P+ + D+I W ++ G Y+V++ Y +A LL ++G ++W ++
Sbjct: 25 QAILDRPLFAEVHNDRIAWMMERSGRYTVKTDYKLAMMELLHTDQFHVEGEC-HRIWKVN 83
Query: 839 ASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 897
+ K + +WR R + + RL+ R V ++ CPWC ED HA V C+ + W
Sbjct: 84 SPHKAHNLLWRICRGCVLMRLRLQSRHVLCEVLCPWCDTTVEDDWHAFVGCTVVRESWYW 143
Query: 898 GG 899
G
Sbjct: 144 AG 145
>IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative
chr01_pseudomolecule_IMGAG_V3 14149157-14148915 H
EGN_Mt090430 20090702
Length = 80
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 386 MLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLS 445
M +MGF KW WM C+ VL+NG GRGLRQGDPLS +LFL A+G +
Sbjct: 1 MEKMGFCVKWRNWMSKCLRLTFMLVLVNGSPTKEFGVGRGLRQGDPLSMFLFLLAAEGFN 60
Query: 446 LLFQDAKRRGRLQGMKV 462
++ + +G ++
Sbjct: 61 VILSKSVHLDLFEGYQL 77
>IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
8360899-8363574 H EGN_Mt090430 20090702
Length = 139
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 425 GLRQGDPLSPYLFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKG 484
G++QGDPL+P+ FL A+ LS+ + A+ G KV R S+THL + DD+FFF
Sbjct: 68 GIQQGDPLTPFFFLPVAEALSMYVKKAEALGICTSFKVSRFGLSVTHLQYVDDTFFFIGK 127
Query: 485 SLQE 488
+ E
Sbjct: 128 TAME 131
>IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,
related, putative chr02_pseudomolecule_IMGAG_V3
26303076-26303699 H EGN_Mt090430 20090702
Length = 188
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 780 RAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVA-RRLLRGRVHEIDGGWWGKMWCLD 838
+AIL P+ D+I W ++ G Y+V++GY +A LL ++G
Sbjct: 3 QAILDTPLFAEVQNDRITWMMERNGRYTVKTGYKLAMMELLHTDWFHVEG---------- 52
Query: 839 ASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 897
+ +PT+ RLR R V+ ++ CPWC ED HA V C+ A+ W
Sbjct: 53 ----------EICKGCVPTRLRLRSRYVQCEVICPWCDTAVEDDWHAFVGCTIARESWYW 102
Query: 898 GGY------EVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
G VG +F + + + + IW ARN+ +W
Sbjct: 103 AGLSTVLQTRVG-TESRLLDFVFDICCSESRDTAGRVALLLWQIWAARNDVIW 154
>IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related
chr08_pseudomolecule_IMGAG_V3 30299266-30298795 H
EGN_Mt090430 20090702
Length = 120
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 770 VMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRSGYYV-----ARRLLRGRV- 823
+ +FS E IL IP+S D+ +WHW++ G +SVRS +++ AR L
Sbjct: 18 IKEIFSEFEANQILNIPLSWRLPSDKRVWHWERNGNFSVRSAHHLIKDVDARNTLEASST 77
Query: 824 --HEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGV 866
EI W +W + A K+F+ R R++LP + RL+R+G+
Sbjct: 78 NGQEI----WKAVWRIKAPHSVKNFLRRLTRDILPARCRLKRKGL 118
>IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,
related, related chr06_pseudomolecule_IMGAG_V3
3835970-3836323 H EGN_Mt090430 20090702
Length = 117
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 788 SINANRDQIMWHWDKKGIYSVRSGY-YVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDF 846
S+ N D+++ +++ KG Y+V+ Y Y L+ + I W +MW + S K F
Sbjct: 3 SLQENDDKLVSNFNNKGRYTVKPTYKYDMETLVNNEQYRISVDWM-RMWKIRVSQSRKVF 61
Query: 847 MWRALRNVLPTKERLRRRGVEVDIGCPWC--GEEEDINHAIVLCSKAKGVWRQG 898
+WR LR V PT L+ RG+ CP C E D N +++ + + + G
Sbjct: 62 LWRELRGVFPTHVSLQVRGIPCSDICPHCETNYENDYNTCLLVVKRQNNMAKGG 115
>IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
38411077-38409788 H EGN_Mt090430 20090702
Length = 359
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 803 KGIYSVRSGYYVARRLLRGRVHEIDGGW-WGKMWCLDASPKDKDFMWRALRNVLPTKERL 861
KGIYS +S Y+ L R H+++ + +W L S + FMW+ + LPTK L
Sbjct: 13 KGIYSTKSAYHT----LLNRFHDVENNHNFNWIWKLKVSSNIQFFMWQICLSSLPTKSIL 68
Query: 862 RRRGVEVDIGCPWC-GEEEDINHAIVLCSKAKGVWRQ 897
R + CP C EE + H ++ C+ AK VW++
Sbjct: 69 VSRHIAPSATCPICNASEEAMIHCLLTCTIAKEVWKK 105
>IMGA|Medtr3g024820.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6346550-6346888 H EGN_Mt090430 20090702
Length = 112
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 321 KILPLIIDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISKAYDRVNWE 380
K++ +I Q F+ R + D V E+I SRK++ K+D KAYD V+W
Sbjct: 8 KVIHCVISANQSTFIKVRQLVDGVVAVNEIID--LSRKSKKECLTFKVDFEKAYDLVSWI 65
Query: 381 FLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLR 427
FL MM ++ F W W+ + SVL+NG + I RGL+
Sbjct: 66 FLDYMMRKLSFGVIWRCWIRDRIFSGSLSVLVNGSPMEEINIQRGLK 112
>IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26789109-26788828 H EGN_Mt090430 20090702
Length = 93
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 546 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIP 604
+P+ G+SK+Q F F+ D++ K++ W + LS + VLI+++ QAIPTY MS F +P
Sbjct: 1 MPTQFGRSKEQDFHFIMDKIWKKLKGWKEKCLSFEGRGVLIRAVAQAIPTYYMSCFLLP 59
>IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34195188-34196556 H EGN_Mt090430 20090702
Length = 307
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMP 734
F+++ FP D+L A LG S+ WRSI++A V + GVRW++GN I + PW+
Sbjct: 82 FKARYFPQSDYLGAKLGHNLSFVWRSIYSARRVARSGVRWKIGNSVNIPIFDAPWLA 138
>IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.7
10132-10811 E EGN_Mt090430 20090702
Length = 170
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 28/137 (20%)
Query: 678 FQSQIFP**DFLDAPLGRRPSYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDH 737
F+++ F F+ + +G PSY +RSI +A ++K W VG+G I L PW+
Sbjct: 47 FKARYFSNSSFIQSSIGHNPSYVYRSIFSAKIMVKHDALWPVGSGANIPFLGAPWL---- 102
Query: 738 SFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIM 797
+D N LF + IL P+ D+++
Sbjct: 103 ----KDGLSLSTTNSIFEPLFAQ--------------------RILNTPLQHLVTEDKLI 138
Query: 798 WHWDKKGIYSVRSGYYV 814
W DK G Y VRS Y +
Sbjct: 139 WKGDKSGKYFVRSAYRI 155
>IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
1138065-1137052 H EGN_Mt090430 20090702
Length = 208
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 683 FP**DFLDAPLGRRPSYAWRSI-HAAIGVLKQGVRWRVGNGETIGVLSHPWMPRD--HSF 739
FP FL A +G PSY WRSI A + V+++ WRV +G I + W+ H
Sbjct: 17 FPRISFLRAFVGYCPSYTWRSIMQACVDVIEKIDIWRVRDGHLIHIWEDNWLSYQNGHKI 76
Query: 740 WVEDSRDFVDPNMKVRELFVEGEGR-WDVGKVMTLFSLREFRAILGIPISINANRDQIMW 798
W + ++ F+ + R W+ + F E + IL +P + +D+ +W
Sbjct: 77 WSPKPSNC---DIMFVSDFIHDDIRCWNAPLINDTFLPFEAQQILQLPFFFSQLQDEFVW 133
Query: 799 HWDKKGIYSVRSGYYVARRLLRG 821
+ I+SV+S Y+ + G
Sbjct: 134 DVSRSTIFSVKSAYHFLKTRCEG 156
>IMGA|AC235488_20.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 85313-83267 H
EGN_Mt090430 20090702
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 396 VKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRG 455
+ WM C+ + VL+NG I RGL+QGDPL+ +L L A+ + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 456 RLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIF 515
+G K+ I+HL + DD+ S+ EA + + K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDAL-----SIGEASMPSGLKVKFYKSCLQGINV------ 109
Query: 516 FSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 575
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|AC235488_13.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 57815-55346 H
EGN_Mt090430 20090702
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 396 VKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRG 455
+ WM C+ + VL+NG I RGL+QGDPL+ +L L A+ + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 456 RLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIF 515
+G K+ I+HL + DD+ S+ EA + + K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDAL-----SIGEASMPSGLKVKFYKSCLQGINV------ 109
Query: 516 FSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 575
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|AC235488_29.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 131244-129198 H
EGN_Mt090430 20090702
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 396 VKWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAKGLSLLFQDAKRRG 455
+ WM C+ + VL+NG I RGL+QGDPL+ +L L A+ + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 456 RLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERASGQAINLNKSSIF 515
+G K+ I+HL + DD+ S+ EA + + K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDAL-----SIGEASMPSGLKVKFYKSCLQGINV------ 109
Query: 516 FSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 575
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|Medtr8g109700.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
24673361-24673122 H EGN_Mt090430 20090702
Length = 79
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 326 IIDECQCAFVPGRLISDNVAVAFELIHNIKSRKNQGGACALKIDISKAYDRVNWEFLRGM 385
+I Q AF+ GR + D V ++I +RK + K+D KAYD V+W FL M
Sbjct: 4 LISSNQSAFIKGRQLVDGVVTVNKIIDV--ARKTKKECLIFKVDFEKAYDSVSWSFLDYM 61
Query: 386 MLRMGFYEKWVKWMMLCV 403
M +G ++W +W+ CV
Sbjct: 62 MRILGVSDRWCRWIRACV 79
>IMGA|AC235567_38.1 hypothetical protein AC235567.1 139216-138758 H
EGN_Mt090430 20090702
Length = 84
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 443 GLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFKGSLQEAEEVNDILKKYERA 502
GLS+L A+ + +K+ R I HLLF DDSF FF+ + EA+ + +L Y A
Sbjct: 18 GLSVLLHRAQLECNIHIVKICRGSAIINHLLFVDDSFIFFRENEGEAQHRHHMLNVYADA 77
Query: 503 SGQAINL 509
SGQ IN+
Sbjct: 78 SGQCINI 84
>IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 17721962-17723166 E
EGN_Mt090430 20090702
Length = 188
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 23/104 (22%)
Query: 506 AINLNKSS-----IFFSPNMSRELMTNISTILNVAGSIGGGTYLGLPSLIGKSKKQVFGF 560
++NL K S I FS N++ +NI IL + G YLG+P+ +GKSK+Q
Sbjct: 29 SLNLVKKSTLTNLIIFSKNVADIEQSNIIQILGMKKVEGFSKYLGVPTHMGKSKRQ---- 84
Query: 561 LQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIP 604
+ LS A + LIK+++QAIPTY MS F +P
Sbjct: 85 --------------KHLSFAGRSTLIKAVSQAIPTYIMSGFLLP 114
>IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31282395-31281349 H
EGN_Mt090430 20090702
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 805 IYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRR 864
+YSV++GY + V G W +W + A K K W A LPT+ L+ R
Sbjct: 4 LYSVKAGYQWLTSHVNSNVMLAIAGSWKWIWRVAAPEKIKFLFWTAYHQSLPTRGMLQHR 63
Query: 865 GVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFFL*VLAHGDKI 923
G+ CP C E E+I H C A+ +W G++ +IN L G +
Sbjct: 64 GMLHSASCPRCPMENENIMHCFRDCVFARQLWLSLGFD--NINFFMEQSVSSWLRRGSES 121
Query: 924 KSQH-FLVYARYIWMARN 940
++ F+ +IW ARN
Sbjct: 122 DNKSLFMSACWWIWRARN 139
>IMGA|Medtr3g086350.1 N-6 Adenine-specific DNA methylase
chr03_pseudomolecule_IMGAG_V3 20173394-20172638 H
EGN_Mt090430 20090702
Length = 131
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 366 LKIDISKAYDRVNWEFLRGMMLRMGFYEKWVKWMMLCVTDVKYSVLLNGKEVGPIRPGRG 425
K+ K YD +NW FL M R+GF +W W+ C+ VL+NG + I RG
Sbjct: 68 FKVGFKKPYDSINWSFLDYMRTRLGFSARWCNWIQTCLFCGNLFVLVNGCSIEEINIQRG 127
Query: 426 LRQG 429
L+QG
Sbjct: 128 LKQG 131
>IMGA|Medtr8g109710.1 reverse transcriptase - beet retrotransposon,
putative chr08_pseudomolecule_IMGAG_V3 24674546-24673629
H EGN_Mt090430 20090702
Length = 305
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 1 GWSSMYVNALAKIITAPVSDHAPLFIQLNYQQVDNNYRRFRFDNSWVGERELDQLVKDVW 60
GW ++ A + VSDH+P + L Y + FRF+N W+ R+ ++V+ W
Sbjct: 65 GWWDLWGEATQWALPRDVSDHSP--VVLRYSSQSWGPKPFRFNNFWLSHRDFGEVVQRSW 122
Query: 61 CNNDSGTLLHKR----------DVCIKEMEKWGRQFNKI--FWKKKRILKQRIANA--RD 106
+ + R D+ + +GR +I + +L+ R+ +
Sbjct: 123 NRSRPPEWMAVRLSTKLKTLKGDLKYWHSQAFGRLEGRIEELVEALNLLELRVERSPLSS 182
Query: 107 VFDDVTVQRLKNEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKL 166
+ + + W +L E ++ Q RWL GD NS YFH++I R+RR IL L
Sbjct: 183 ADSEAKFKGFHDLW-ALLRARESQLFQQSCSRWLREGDANSAYFHSNINLRRRRNSILAL 241
>IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
5935308-5934228 H EGN_Mt090430 20090702
Length = 292
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 728 LSHPWMPRDHSFWVEDSRDFVDPNMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPI 787
++ W+ H W++ + N+ V +L + E WD+ K+ +LF+ +AIL P+
Sbjct: 1 MNDSWIRGVHGSWIQSPQSHDVHNLHVSDLIADEERVWDIDKIESLFTDDMVQAILDTPL 60
Query: 788 SINANRDQIMWHWDKKGIYSVRSGYYVA-RRLLRGRVHEIDGGWWGKMWCLDASPKDKDF 846
D+I W ++ G Y+V++ Y + +LL ++G W ++W +++ K ++
Sbjct: 61 FSEVQNDRITWMMERNGRYTVKTDYKLTMMKLLHNDRFHVEGE-WHRIWNVNSPHKARNM 119
>IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
23554988-23554803 H EGN_Mt090430 20090702
Length = 61
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 333 AFVPGRLISDNVAVAFELIHNIK-SRKNQGGACALKIDISKAYDRV 377
AFV R I DNV A E+IH++K RK + G ALKIDISKAYDRV
Sbjct: 15 AFVENRSIIDNVIAAHEVIHHMKCKRKGKVGEVALKIDISKAYDRV 60
>IMGA|Medtr2g056130.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 15253178-15253955 H
EGN_Mt090430 20090702
Length = 128
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 786 PISINANRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKD 845
P+ + +D+++W +K G Y VRS Y + + H W ++W L+ K +
Sbjct: 43 PLIQSVYKDKLIWKAEKDGQYLVRSSYRLCVNTIVDNSHLHKPSGWNEIWKLEVPSKVNN 102
Query: 846 FMWRALRNVLPTKERLRRRG 865
F+WR RN LPT RL RG
Sbjct: 103 FVWRVCRNCLPTWARLTYRG 122
>IMGA|Medtr5g022410.1 Leucine-rich repeat
chr05_pseudomolecule_IMGAG_V3 8738399-8741638 E
EGN_Mt090430 20090702
Length = 639
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 790 NANRDQIMWHWDKKGIYSVRSGYYVARRL--LRGRVHEIDGGWWGKMWCLDASPKDKDFM 847
N D +W + +G+++V+S Y L L + D + ++W A K F
Sbjct: 365 NHENDSWVWKGEAEGVFTVKSMYKKLEGLFILEDTWGDEDRRVFHQLWKSPAPSKVIAFS 424
Query: 848 WRALRNVLPTKERLRRRGV---EVDIGCPW-CGEEEDINHAIVLCSKAKGVWRQGGYEVG 903
W+ L + +PT+ L RR EV + C W GE E H + CS A+GVW + + V
Sbjct: 425 WKMLLDRIPTRTNLSRRNALPPEVPLNCVWRVGEREMTKHLFLHCSLARGVWLRLMHWVD 484
Query: 904 DINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
+ I N L ++ H IW ARN+ ++
Sbjct: 485 IMFIMPNNLGLKLVWHAT----------IWLIWKARNDLIF 515
>IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V3
16870634-16874775 H EGN_Mt090430 20090702
Length = 651
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 96/254 (37%), Gaps = 17/254 (6%)
Query: 698 SYAWRSIHAAIGVLKQGVRWRVGNGETIGVLSHPWMPRDHSFWVEDSRDF-VDPNMKVRE 756
S WR I + + WRVG G+ I S W+P + +D +M +
Sbjct: 119 SNLWRGICRNWEKVTPNLIWRVGQGDNINFWSDMWVPGAGPLSCHTNLPITIDDDMLTVK 178
Query: 757 LFVEGEGRWDVGKVMTLFSLREFRAILGIPISIN-ANRDQIMWHWDKKGIYSVRSGYYVA 815
F G W++ ++ L I +P + A+ D + W G +S + +A
Sbjct: 179 EFANDAGDWNLSLLVNLLPPWIIEQIRSLPAPHSEASVDSLAWEGSLDGEFS----HALA 234
Query: 816 RRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWC 875
+ + + +W + K +W+ R +L T RG+ + C C
Sbjct: 235 YESILSLTPSNNSNLYKCIWKWQGPERIKFLLWKVARKILLTNLTRNSRGMAPNDRCSIC 294
Query: 876 GEE-EDINHAIVLCSKAKGVWRQGGYEVGDINISFTNF------FL*VLAHGD-KIKSQH 927
E E I H I C AK W +G+ + +F NF F L+ D + S
Sbjct: 295 NSEPESIIHTIRECHLAKATWNT---ILGNTSPNFYNFGELQHWFFWNLSRRDIEGWSTI 351
Query: 928 FLVYARYIWMARNN 941
F V +W RNN
Sbjct: 352 FAVTVDCLWWDRNN 365
>IMGA|Medtr3g098050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
23637089-23637874 H EGN_Mt090430 20090702
Length = 200
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 748 VDPNMKVRELFVEGEGR-----------WDVGKVMTLFSLREFRAILGIPISINANRDQI 796
V+ N V E+FV+G G WD + M + E R +L I + + DQ
Sbjct: 42 VNKNQTVAEMFVKGWGNGGEAWEWRRRLWDWEEEM----VTECRLLLDIVVFQDTTGDQW 97
Query: 797 MWHWDKKGIYSVRSGYYVARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLP 856
W + G Y VRS Y + + ++ + G +W K+ F WR LRN LP
Sbjct: 98 RWRLENSGSYYVRSVYELLTKAENALMNAVSG----LIWHRYVPLKEFIFAWRLLRNRLP 153
Query: 857 TKERLRRRGV---EVDIGCPWCGEEEDINHAIVLCSKAKGVW 895
TK L RG+ + + CGE + +H V C +W
Sbjct: 154 TKVNLVARGMIDSDDHLCVSGCGEVDTDHHLFVSCPIFGDLW 195
>IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
27054842-27053784 E EGN_Mt090430 20090702
Length = 348
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 815 ARRLLRGRVHEIDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPW 874
+R+L+ H W +W L K K +W A +NV+PT L RR + C
Sbjct: 18 SRQLISSLAHPS----WSWIWNLQVPEKYKFLIWLACQNVVPTLSLLHRRNIAPSPTCAR 73
Query: 875 CGEE-EDINHAIVLCSKAKGVWRQGGYEVGD 904
CGEE E H + C ++ +W++ G+ D
Sbjct: 74 CGEEDETFLHCVRDCHFSRSIWQKIGFTCND 104
>IMGA|Medtr8g021560.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4040558-4040926 H
EGN_Mt090430 20090702
Length = 83
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 436 LFLFCAKGLSLLFQDAKRRGRLQGMKVGRNCPSITHLLFADDSFFFFK 483
LF+ CA+GL L + + G L G+K+ RN IT +LFADD F FF+
Sbjct: 27 LFILCAEGLCALIKYVEASGELHGVKICRNTLIITRILFADDYFLFFR 74
>IMGA|Medtr8g006140.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
577887-575821 H EGN_Mt090430 20090702
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 41/170 (24%)
Query: 780 RAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLL----RGRVHEIDGGWWGKMW 835
+AIL P+ + D+I+W ++ G Y+V++ Y +A L R + E D G
Sbjct: 3 QAILDTPLFVEVQNDRIVWMMERNGRYTVKTDYKLAMMELLHTDRFHLKENDIG------ 56
Query: 836 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 894
+ R +PT+ LR R V+ ++ CPWC ED HA V C +
Sbjct: 57 --------------SGRGCVPTRLLLRSRHVQCEVICPWCDTAVEDDWHAFVGCMVS--- 99
Query: 895 WRQGGYEVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
S +F + + S + IW+ARN+ +W
Sbjct: 100 -------------SLADFVFDICCSESRDISGRVALLHWKIWVARNDIIW 136
>IMGA|Medtr8g005870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
490235-488169 H EGN_Mt090430 20090702
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 41/170 (24%)
Query: 780 RAILGIPISINANRDQIMWHWDKKGIYSVRSGYYVARRLL----RGRVHEIDGGWWGKMW 835
+AIL P+ + D+I+W ++ G Y+V++ Y +A L R + E D G
Sbjct: 3 QAILDTPLFVEVQNDRIVWMMERNGRYTVKTDYKLAMMELLHTDRFHLKENDIG------ 56
Query: 836 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 894
+ R +PT+ LR R V+ ++ CPWC ED HA V C +
Sbjct: 57 --------------SGRGCVPTRLLLRSRHVQCEVICPWCDTAVEDDWHAFVGCMVS--- 99
Query: 895 WRQGGYEVGDINISFTNFFL*VLAHGDKIKSQHFLVYARYIWMARNNALW 944
S +F + + S + IW+ARN+ +W
Sbjct: 100 -------------SLADFVFDICCSESRDISGRVALLHWKIWVARNDIIW 136
>IMGA|Medtr3g138260.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35326334-35325873 H EGN_Mt090430 20090702
Length = 153
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 111 VTVQRLKNEWNTILFKEECRMRQIRKQRWLYWGDQNSKYFHASIKNRKRRAKILKLENED 170
+ +++L+ + + +L +EE Q K WL GD N+KYFH RKR+ I ++++
Sbjct: 51 LKIKQLEVDLDDLLKQEELWWAQRAKVHWLKHGDLNTKYFHHKASQRKRKNYISNIQDQS 110
Query: 171 GDIVQDNDSLEQITLNYFSTVYSAEE 196
G+ QD++ + I N+F ++S+
Sbjct: 111 GNFWQDSNKIHSIFSNHFQNIFSSSH 136
>IMGA|Medtr5g037770.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
15923468-15924026 H EGN_Mt090430 20090702
Length = 136
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 252 NFWHVIGDDIWRDSKQWLDTGTFPKTLTDIHIVLLPKCDILCR*KSIDLFRFVMFC---I 308
+FW + +DI++D +WL+ G FP +L +I L+ K +I ++ +R + C
Sbjct: 38 HFWSICSEDIFKDCCEWLELGQFPASLNTTNITLISKDNIH---TTVKDWRPITLCNVLY 94
Query: 309 KL*QNL*RIG*KKILPLIIDECQCAFVPGRLISDN 343
KL + G K +LP I + Q F+ GR I DN
Sbjct: 95 KLISKVLADGLKGVLPKCIYDNQSTFLSGRSILDN 129
>IMGA|Medtr8g073360.1 Shikimate kinase; Carbohydrate kinase,
thermoresistant glucokinase
chr08_pseudomolecule_IMGAG_V3 14301477-14299146 E
EGN_Mt090430 20090702
Length = 281
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 751 NMKVRELFVEGEGRWDVGKVMTLFSLREFRAILGIPISINANRDQIMWHWDKKGIYSVRS 810
N++V +L V+G+ RWD K+ LFS AIL +P+ + D+++W D G YSV S
Sbjct: 12 NLRVSDLMVQGKRRWDEAKIQHLFSNGVAAAILAVPLLLVDKDDRVIWSEDLHGNYSVWS 71
Query: 811 G 811
G
Sbjct: 72 G 72
>IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
24503551-24503384 H EGN_Mt090430 20090702
Length = 55
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 555 KQVFGFLQDRLEKRIGNWSNRFLSRARKEVLIKSITQAIPTYCMSVFKIPLS 606
K +F +++DR+ KRI +W + L +A +E+LIK + Q +P Y MS+F + +S
Sbjct: 2 KVIFNYVRDRIWKRIESWHGKHLFKAGREILIKFVVQLVPAYQMSIFLLLMS 53
>IMGA|Medtr7g018240.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
4461016-4461225 H EGN_Mt090430 20090702
Length = 69
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 334 FVPGRLISDNVAVAFELIHNIKSRK-NQGGACALKIDISKAYDRVNWEFLRGMMLRMGFY 392
FV G+ I DN VAF+++H IK Q ALK+DISK YD W +L+ +ML++G +
Sbjct: 2 FVSGKSILDNAMVAFKVVHYIKVDICKQNNNVALKLDISKVYDY--WVYLKKVMLKLGIF 59