Jatropha Genome Database

JcCB0704851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0704851.10 + phase: 0 
         (78 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g156420.1 ER lumen protein retaining receptor; Orn/DA...   127   2e-30

>IMGA|Medtr3g156420.1 ER lumen protein retaining receptor;
          Orn/DAP/Arg decarboxylase 2
          chr03_pseudomolecule_IMGAG_V3 41010513-41005039 E
          EGN_Mt090430 20090702
          Length = 493

 Score =  127 bits (318), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/75 (74%), Positives = 68/75 (90%)

Query: 1  MKASKRPIHAVATWIRRQPPKIKTFLAVVSGIVALVFLRMVVHDHDNLFVASEAVHAVGI 60
          MKA+K PIHAV  W+RRQPPK+K FLA++SGI ALVFLRM+VHDHDNLFVA+E VHA+G+
Sbjct: 1  MKATKSPIHAVTKWLRRQPPKMKLFLAILSGIAALVFLRMIVHDHDNLFVAAEFVHALGV 60

Query: 61 SVLIYKLMKEKTCAG 75
          ++LIYKL +EKTCAG
Sbjct: 61 ALLIYKLAQEKTCAG 75