Jatropha Genome Database

JcCB0700881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0700881.10 + phase: 2 /partial
         (139 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g127830.1 Glycosyl transferase, family 43 chr03_pseud...   252   3e-68
IMGA|AC225517_25.1 Glycosyl transferase, family 43 AC225517.6 11...   160   2e-40
IMGA|Medtr7g120990.1 Glycosyl transferase, family 43 chr07_pseud...   101   1e-22

>IMGA|Medtr3g127830.1 Glycosyl transferase, family 43
           chr03_pseudomolecule_IMGAG_V3 32500418-32497183 F
           EGN_Mt090430 20090702
          Length = 441

 Score =  252 bits (644), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 111/139 (79%), Positives = 127/139 (91%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 60
           RFG WPVAMLA SKNKAILEGPVCNGS V+GWHTNEKSKRLRRFHVDMSGFAFNSTILWD
Sbjct: 303 RFGTWPVAMLAPSKNKAILEGPVCNGSQVLGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 362

Query: 61  PKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHHL 120
           PKRWRRP S+ IRQLD+VKEGFQETTFIEQ++EDESQ+E  PPGC +I+NWHLHL+ H++
Sbjct: 363 PKRWRRPTSNPIRQLDSVKEGFQETTFIEQLVEDESQMEGSPPGCKKIMNWHLHLNVHNI 422

Query: 121 VYPRGWLFQKNLDVILPIK 139
           VYP+GW+ +KNLD ++ IK
Sbjct: 423 VYPKGWMLEKNLDAVIHIK 441


>IMGA|AC225517_25.1 Glycosyl transferase, family 43 AC225517.6
           110047-106863 E EGN_Mt090430 20090702
          Length = 479

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 99/136 (72%), Gaps = 1/136 (0%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTN-EKSKRLRRFHVDMSGFAFNSTILW 59
           RFG W VA L++ ++  +L+GP+CNGS VIGWHTN E     +RFH +M GFAFNSTILW
Sbjct: 297 RFGTWTVARLSKDRSGILLQGPICNGSEVIGWHTNNESGGNSKRFHAEMQGFAFNSTILW 356

Query: 60  DPKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHH 119
           DPK+W RP    IRQL++VKE    +T IEQ+++DES++E +   CSR++ W++ L++ +
Sbjct: 357 DPKKWHRPSLKPIRQLESVKENLWVSTLIEQIVKDESEMEGLMNDCSRVMVWNIDLESSY 416

Query: 120 LVYPRGWLFQKNLDVI 135
             YP+ W+ + NLDVI
Sbjct: 417 SFYPKKWITENNLDVI 432


>IMGA|Medtr7g120990.1 Glycosyl transferase, family 43
           chr07_pseudomolecule_IMGAG_V3 28393985-28390609 E
           EGN_Mt090430 20090702
          Length = 338

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 8/115 (6%)

Query: 2   FGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDP 61
           FG WP A+L  ++ + I+EGPVC+ S VIGWH    +       + +S FAFNS+ILWDP
Sbjct: 222 FGTWPTALLLANRKRVIIEGPVCDSSQVIGWHLRSMNNETITSPIHISSFAFNSSILWDP 281

Query: 62  KRWRRPFSSAIRQLDTVKEGFQETTFIEQVI-EDESQIESVPPGCSRILNWHLHL 115
           +RW R  +S+++  DT +   +   F++QV+ EDE++++ +PP CS+IL W  + 
Sbjct: 282 ERWGR--TSSVK--DTSQNSIK---FVKQVVLEDEAKLKGIPPYCSKILLWRFNF 329