Jatropha Genome Database

JcCB0697191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0697191.10 - phase: 1 /partial
         (132 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   228   8e-61
IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   228   8e-61
IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   227   1e-60

>IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr02_pseudomolecule_IMGAG_V3 32376549-32372121 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  228 bits (580), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 106/132 (80%), Positives = 115/132 (87%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           KACEN TQPLKFLYPL            +SYGA GVEYSEQAEK+IE+Y++QGFSGLPIC
Sbjct: 550 KACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYSEQAEKKIELYTKQGFSGLPIC 609

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFS NA+ KGAP+GF+LPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID
Sbjct: 610 MAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 669

Query: 121 LDTATGKVIGLS 132
           LDT TG+VIGLS
Sbjct: 670 LDTTTGQVIGLS 681


>IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr05_pseudomolecule_IMGAG_V3 22553092-22548664 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  228 bits (580), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 106/132 (80%), Positives = 115/132 (87%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           KACEN TQPLKFLYPL            +SYGA GVEYSEQAEK+IE+Y++QGFSGLPIC
Sbjct: 550 KACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYSEQAEKKIELYTKQGFSGLPIC 609

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFS NA+ KGAP+GF+LPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID
Sbjct: 610 MAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 669

Query: 121 LDTATGKVIGLS 132
           LDT TG+VIGLS
Sbjct: 670 LDTTTGQVIGLS 681


>IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS
           chr01_pseudomolecule_IMGAG_V3 32386595-32382177 E
           EGN_Mt090430 20090702
          Length = 699

 Score =  227 bits (579), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 106/132 (80%), Positives = 115/132 (87%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           KACEN TQPLKFLYPL            +SYGA GVEYSEQAEK+IE+Y++QGFSGLPIC
Sbjct: 568 KACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYSEQAEKKIELYTKQGFSGLPIC 627

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFS NA+ KGAP+GF+LPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID
Sbjct: 628 MAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 687

Query: 121 LDTATGKVIGLS 132
           LDT TG+VIGLS
Sbjct: 688 LDTTTGQVIGLS 699