Jatropha Genome Database

JcCB0694151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0694151.10 + phase: 1 /partial
         (124 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g146580.1 CDP-alcohol phosphatidyltransferase chr01_p...   192   5e-50
IMGA|Medtr7g005300.1 CDP-alcohol phosphatidyltransferase chr07_p...   130   2e-31
IMGA|Medtr7g005190.1 CDP-alcohol phosphatidyltransferase chr07_p...   129   3e-31
IMGA|Medtr7g005180.1 CDP-alcohol phosphatidyltransferase chr07_p...    60   3e-10

>IMGA|Medtr1g146580.1 CDP-alcohol phosphatidyltransferase
           chr01_pseudomolecule_IMGAG_V3 32448704-32445872 F
           EGN_Mt090430 20090702
          Length = 284

 Score =  192 bits (487), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 97/125 (77%), Positives = 109/125 (87%), Gaps = 1/125 (0%)

Query: 1   LMVAATLVLLCTRPPEVAIFGQVPWLLTVPSILIIGREITMSAVREWAASQNSKLLEAVA 60
           LMVAATLVLLCTRP +V +F Q+PWLL +P+I IIGREITMSAVREWAASQ+SKLLEAVA
Sbjct: 160 LMVAATLVLLCTRPLDVGVFAQLPWLLPIPAIAIIGREITMSAVREWAASQDSKLLEAVA 219

Query: 61  VNNLGKWKTATQMTALTILLATRDSSLGGPGISVAS-VVLLYISAGLSVWSLAMYMSKIW 119
           VNNLGKWKTATQMTAL +LLATRDSS GG    V S V LLY SAGL++WSLA+YM KIW
Sbjct: 220 VNNLGKWKTATQMTALALLLATRDSSHGGAAFVVGSGVALLYTSAGLALWSLAVYMRKIW 279

Query: 120 RVLLK 124
           +VLL+
Sbjct: 280 KVLLR 284


>IMGA|Medtr7g005300.1 CDP-alcohol phosphatidyltransferase
           chr07_pseudomolecule_IMGAG_V3 312360-313806 E
           EGN_Mt090430 20090702
          Length = 117

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/89 (74%), Positives = 75/89 (84%), Gaps = 1/89 (1%)

Query: 37  REITMSAVREWAASQNSKLLEAVAVNNLGKWKTATQMTALTILLATRDSSLGGPGISVAS 96
             ITMSA+REWAASQ SK+LEAVAVNNLGKWKTATQMTALTILLATRD S GGP I   S
Sbjct: 29  ERITMSALREWAASQGSKVLEAVAVNNLGKWKTATQMTALTILLATRDCSHGGPAILAGS 88

Query: 97  -VVLLYISAGLSVWSLAMYMSKIWRVLLK 124
            V LLYI+AGL++WS  +YM K+W+VLL+
Sbjct: 89  GVFLLYIAAGLAIWSFVVYMRKMWKVLLR 117


>IMGA|Medtr7g005190.1 CDP-alcohol phosphatidyltransferase
           chr07_pseudomolecule_IMGAG_V3 239747-242207 E
           EGN_Mt090430 20090702
          Length = 150

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)

Query: 39  ITMSAVREWAASQNSKLLEAVAVNNLGKWKTATQMTALTILLATRDSSLGGPGISVAS-V 97
           ITMSA+REWAASQ SK+LEAVAVNNLGKWKTATQMTALTILLATRD S GGP I   S V
Sbjct: 64  ITMSALREWAASQGSKVLEAVAVNNLGKWKTATQMTALTILLATRDCSHGGPAILAGSGV 123

Query: 98  VLLYISAGLSVWSLAMYMSKIWRVLLK 124
            LLYI+AGL++WS  +YM K+W+VLL+
Sbjct: 124 FLLYIAAGLAIWSFVVYMRKMWKVLLR 150


>IMGA|Medtr7g005180.1 CDP-alcohol phosphatidyltransferase
           chr07_pseudomolecule_IMGAG_V3 236647-239273 E
           EGN_Mt090430 20090702
          Length = 166

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query: 1   LMVAATLVLLCTRPPEVAIFGQVPWLLTVPSILIIGRE 38
           LMVAATL+LLCTRP +VA   Q PWLL +PSI IIGRE
Sbjct: 97  LMVAATLILLCTRPLKVAALAQAPWLLIIPSITIIGRE 134