Jatropha Genome Database

JcCB0693601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693601.10 + phase: 0 
         (333 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g140130.1 S-adenosylmethionine decarboxylase chr08_ps...   218   4e-57
IMGA|Medtr2g026090.1 S-adenosylmethionine decarboxylase chr02_ps...   215   3e-56

>IMGA|Medtr8g140130.1 S-adenosylmethionine decarboxylase
           chr08_pseudomolecule_IMGAG_V3 34332981-34331643 E
           EGN_Mt090430 20090702
          Length = 346

 Score =  218 bits (555), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/317 (41%), Positives = 182/317 (57%), Gaps = 25/317 (7%)

Query: 1   MAVSAIGFEGYEKRLEITFF--EPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKN 58
           MAVS  GFEG+EKRLE+ FF  +P  F      GLR +    + + L   +CT+V ++ N
Sbjct: 1   MAVS--GFEGFEKRLELHFFGDDPITF----QLGLRKIDFESIQQVLEAVQCTVVSAVGN 54

Query: 59  DHVDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIF 118
            + D+YVLSESSLF+YP K+IIKTCG              +N   L + S RYTRGSFIF
Sbjct: 55  SYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSILPLIHYANQTGLTLCSCRYTRGSFIF 114

Query: 119 PGAQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYAD------S 172
           P AQ +P+ SF +EV  L+D          A +M    S     WHV++A++       S
Sbjct: 115 PNAQPFPYTSFNDEVTYLEDTIPSNLCHRKASIMPSKSSS--HSWHVFTAHSSITHHNHS 172

Query: 173 AISRDL-VYTVEMCMTGLDRQKAAVFF------KTRSASAAVMTVDSGIRKILPDSKICD 225
               D+ ++T+E+CMT LD   A  FF      KT  ++   MT  +GI +I P++ ICD
Sbjct: 173 HTHSDIDIFTMEICMTELDPILARKFFRPPGDGKTGDSAGKEMTELTGINEINPNAFICD 232

Query: 226 FDFDPCGYSMNSIEGSAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPS 285
           F FDPCGYSMN ++    STIH+TPEDGFSYASFE VG   +  N+  ++ +V+  F+P 
Sbjct: 233 FAFDPCGYSMNGMDDDWYSTIHVTPEDGFSYASFECVGSVND--NIVHVLRKVVQIFRPG 290

Query: 286 QFSIAVHADVAGKQLMR 302
             SI++       ++++
Sbjct: 291 TMSISMTCSNYSNEMLK 307


>IMGA|Medtr2g026090.1 S-adenosylmethionine decarboxylase
           chr02_pseudomolecule_IMGAG_V3 7061157-7059737 E
           EGN_Mt090430 20090702
          Length = 351

 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 174/296 (58%), Gaps = 14/296 (4%)

Query: 7   GFEGYEKRLEITFF--EPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDHVDSY 64
           GFEG+EKRLE+ FF  +P   ++ +  GLR L    + + L   +CT+V ++ N + D+Y
Sbjct: 5   GFEGFEKRLELHFFGDDPNPTINHQ-LGLRKLEFESIQQILQAVQCTVVSAVGNSYFDAY 63

Query: 65  VLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNA-LSLKVKSVRYTRGSFIFPGAQS 123
           VLSESSLF+YP K+IIKTCG              +N  L+  + SV YTRGSFIFP +Q 
Sbjct: 64  VLSESSLFVYPTKIIIKTCGTTQLLKSIIPLIYFANTHLNFTLSSVSYTRGSFIFPNSQP 123

Query: 124 YPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDL-VYTV 182
           +PH SF EEV+ L++          A +M    S     WHV++A  +         YT+
Sbjct: 124 FPHTSFNEEVSYLENTIPSNLCFRKASIMPSKSSS--HSWHVFTATQNPHHHIPYEQYTM 181

Query: 183 EMCMTGLDRQKAAVFF------KTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMN 236
           E+CMT LD   A  FF      K+ ++S   MT  +GI +I  ++ ICDF FDPCGYSMN
Sbjct: 182 EICMTELDPILAGKFFRRPDEEKSGNSSGNQMTELTGINEINKEAFICDFAFDPCGYSMN 241

Query: 237 SIEGSAISTIHITPEDGFSYASFETVG-YHPEEVNLNQLVDRVLSCFQPSQFSIAV 291
            ++G   STIH+TPEDG+SYASFE VG     + N+  ++ +V+  F+P   S+++
Sbjct: 242 GMDGECYSTIHVTPEDGYSYASFECVGSISDNDDNIVHMLRKVVQIFRPGTMSVSI 297