Jatropha Genome Database

JcCB0693201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693201.10 - phase: 0 /partial
         (127 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase (UDP-form...   178   7e-46
IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase (UDP-form...   108   7e-25

>IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr07_pseudomolecule_IMGAG_V3
           19564226-19562669 F EGN_Mt090430 20090702
          Length = 347

 Score =  178 bits (451), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 103/127 (81%)

Query: 1   MSVTNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNV 60
           MS   I DN+VDI+IGAL+S+LT F NEW+ IFSRF LIIVKDP L EEL+IPEGF+ +V
Sbjct: 1   MSQVIINDNEVDIVIGALHSNLTPFMNEWKSIFSRFHLIIVKDPALKEELQIPEGFSADV 60

Query: 61  YTKSHIDQVVGPSNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQH 120
           YT S I++VVG S SI FSGY+CRYFGFL+S+KKY++ +DDDC PAKD+   +V+AV QH
Sbjct: 61  YTNSEIERVVGSSTSIRFSGYACRYFGFLVSKKKYVVCIDDDCVPAKDDAGNVVDAVAQH 120

Query: 121 IMNLTAP 127
           I+NL  P
Sbjct: 121 IVNLKTP 127


>IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr05_pseudomolecule_IMGAG_V3
           20550596-20553315 F EGN_Mt090430 20090702
          Length = 362

 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 85/125 (68%), Gaps = 3/125 (2%)

Query: 4   TNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTK 63
           T +  +++DI+I  + +    F   WRP F ++ LIIV+D D ++ +K+P+GF+  +Y +
Sbjct: 8   TPLLKDELDIVIPTIRN--LDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPQGFDYELYNR 65

Query: 64  SHIDQVVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIM 122
           + I++++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     +NA++QHI 
Sbjct: 66  NDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIK 125

Query: 123 NLTAP 127
           NL +P
Sbjct: 126 NLLSP 130