Jatropha Genome Database

JcCB0691701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0691701.10 + phase: 0 
         (57 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g111380.1 Ribosomal protein S10, eukaryotic and archa...    46   4e-06
IMGA|Medtr2g100760.1 Ribosomal protein S10, eukaryotic and archa...    45   1e-05
IMGA|Medtr2g100300.1 Ribosomal protein S10, eukaryotic and archa...    45   1e-05
IMGA|Medtr2g100170.1 Ribosomal protein S10, eukaryotic and archa...    45   1e-05

>IMGA|Medtr7g111380.1 Ribosomal protein S10, eukaryotic and
          archaeal form chr07_pseudomolecule_IMGAG_V3
          26148000-26149875 F EGN_Mt090430 20090702
          Length = 122

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+VKNLEK
Sbjct: 13 LEESQEQIHKIRITLSSKHVKNLEK 37


>IMGA|Medtr2g100760.1 Ribosomal protein S10, eukaryotic and
          archaeal form chr02_pseudomolecule_IMGAG_V3
          23553996-23550892 E EGN_Mt090430 20090702
          Length = 123

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/25 (88%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+V+NLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVQNLEK 38


>IMGA|Medtr2g100300.1 Ribosomal protein S10, eukaryotic and
          archaeal form chr02_pseudomolecule_IMGAG_V3
          23328972-23332076 E EGN_Mt090430 20090702
          Length = 123

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/25 (88%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+V+NLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVQNLEK 38


>IMGA|Medtr2g100170.1 Ribosomal protein S10, eukaryotic and
          archaeal form chr02_pseudomolecule_IMGAG_V3
          23299400-23296291 E EGN_Mt090430 20090702
          Length = 123

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/25 (88%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+V+NLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVQNLEK 38