Jatropha Genome Database

JcCB0689281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0689281.10 - phase: 0 /partial
         (267 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g107280.1 Thioredoxin-like fold chr07_pseudomolecule_...   212   1e-55
IMGA|Medtr7g009510.1 Thioredoxin fold chr07_pseudomolecule_IMGAG...    95   3e-20
IMGA|Medtr8g039690.1 Thioredoxin fold chr08_pseudomolecule_IMGAG...    87   7e-18
IMGA|Medtr3g020120.1 Thioredoxin fold chr03_pseudomolecule_IMGAG...    86   3e-17
IMGA|Medtr5g090610.1 Glutaredoxin active site chr05_pseudomolecu...    68   5e-12
IMGA|Medtr4g155310.1 Thioredoxin fold chr04_pseudomolecule_IMGAG...    64   8e-11
IMGA|Medtr7g127470.1 Thioredoxin-like fold chr07_pseudomolecule_...    64   9e-11
IMGA|Medtr1g112130.1 Thioredoxin fold chr01_pseudomolecule_IMGAG...    60   1e-09
IMGA|Medtr5g080620.1 Thioredoxin fold chr05_pseudomolecule_IMGAG...    59   3e-09
IMGA|Medtr3g094680.1 Thioredoxin fold chr03_pseudomolecule_IMGAG...    58   6e-09
IMGA|Medtr3g029530.1 Thioredoxin-like fold chr03_pseudomolecule_...    49   2e-06

>IMGA|Medtr7g107280.1 Thioredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 25053675-25052020 E
           EGN_Mt090430 20090702
          Length = 426

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/286 (46%), Positives = 168/286 (58%), Gaps = 30/286 (10%)

Query: 3   RALSLQTPLVHHPPSRKGDSHHXXXXXXXXXXXXXXIEPITHPKFPDQTQSPQKSTINSN 62
           +ALSL  PL+HHPP++KGD+HH              I+    P F    Q     T  + 
Sbjct: 52  KALSLTMPLIHHPPTKKGDTHHLVSLTSTTYGSLLLIDQKV-PSFTPHYQPHLTKTCQNE 110

Query: 63  KTLIPADPGESLSPDSVINTWELMDGLDELD--FEMGXXXXXXXXXXXDDYVLISPKSNS 120
           +        +SLSPDSVINTWELMDGLDE +                 D+ +  S K +S
Sbjct: 111 E--------QSLSPDSVINTWELMDGLDEHEDSHHHDSATNVHKPSIFDNPMSFSDKHSS 162

Query: 121 FHHLGFDESVKK-LNDSFDFVKSEEIEVDKSFSLSK------PLWKHLSEESFLSNMDPN 173
             +  FD S KK L DSF+ +K+ E  +D+  S S       PLW+HLSEE+ L+ +DP+
Sbjct: 163 CRYTTFDGSAKKKLLDSFESLKASETVMDEKKSSSSKKNLKKPLWQHLSEEALLAKLDPS 222

Query: 174 VVSSYRRALSSRQLGYTKES------KSIKSVGSSPIN---SSFKNGFIF---QDNKIVL 221
           V  SYRRALSSRQLG +  +      + ++S+ SSP+N   S F          +N+IV+
Sbjct: 223 VAWSYRRALSSRQLGGSSNNNNKNLFRCVRSMESSPMNPCSSLFDKSLCLLPGTENRIVV 282

Query: 222 YYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
           Y TSLRGIRKTYEDCCAVRMI RG+RV VDERDISMDSSYRKELQ+
Sbjct: 283 YCTSLRGIRKTYEDCCAVRMILRGYRVAVDERDISMDSSYRKELQN 328


>IMGA|Medtr7g009510.1 Thioredoxin fold chr07_pseudomolecule_IMGAG_V3
           1699779-1703924 E EGN_Mt090430 20090702
          Length = 454

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 51/211 (24%)

Query: 63  KTLIPADPGESLSPDSVINTWELMDGLDELDFEMGXXXXXXXXXXXDDYVLISPKSNSFH 122
           KT     PGE   P++ INTWELM+GL++                      ISP  +  H
Sbjct: 150 KTPTRTPPGE---PET-INTWELMEGLED----------------------ISPFRSPNH 183

Query: 123 HLGFDESVKKLNDSFDFVKSEEIEVDKSFSLSKPLWKHLSEESFLSN---MDPNVVSSYR 179
              F         SFD     E          KP+W  ++EE    N    DP V+SS+R
Sbjct: 184 FKSF---------SFDVNGGGE-----GVDPPKPMWLQITEEESKLNQVDFDPEVISSFR 229

Query: 180 RALSSRQLG---YTKESKSIKSVGSSPI-NSSFKNGFIFQDNKIVLYYTSLRGIRKTYED 235
           ++L  +      Y K++    S+    + +  F +  I    K+V Y+TSLRG+RKTYED
Sbjct: 230 KSLQEQSQDSPFYLKQT----SIDEEEMKDDVFVDVKIGGKEKVVFYFTSLRGVRKTYED 285

Query: 236 CCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
           CC VRMI RG  V VDERD+SM   +++EL+
Sbjct: 286 CCQVRMILRGLGVRVDERDVSMHLGFKEELR 316


>IMGA|Medtr8g039690.1 Thioredoxin fold chr08_pseudomolecule_IMGAG_V3
           8358375-8359852 E EGN_Mt090430 20090702
          Length = 257

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
           +++IV+Y+TSLRGIR+TYEDC AVRMI RGFRV VDERD+SMD  YRKEL S
Sbjct: 105 EDRIVVYFTSLRGIRRTYEDCYAVRMILRGFRVWVDERDVSMDICYRKELMS 156


>IMGA|Medtr3g020120.1 Thioredoxin fold chr03_pseudomolecule_IMGAG_V3
           4397511-4400038 E EGN_Mt090430 20090702
          Length = 283

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 6/82 (7%)

Query: 192 ESKSIKSVGSSPINSSFKN--GFIFQ----DNKIVLYYTSLRGIRKTYEDCCAVRMIFRG 245
           E ++   +G  P +   K+  G +F+    D++IV+Y TSLRGIR+T+EDC AV+MI +G
Sbjct: 84  EPRAASKLGQKPRSGPEKDEAGMLFRLADADDRIVVYLTSLRGIRRTFEDCNAVKMILKG 143

Query: 246 FRVPVDERDISMDSSYRKELQS 267
           FRV VDERD+SMD ++RKELQS
Sbjct: 144 FRVWVDERDVSMDRAFRKELQS 165


>IMGA|Medtr5g090610.1 Glutaredoxin active site
           chr05_pseudomolecule_IMGAG_V3 35383689-35382882 E
           EGN_Mt090430 20090702
          Length = 247

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 39/51 (76%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
           +N++V+Y+TSLR IR+TY DC AVR I R FRV  DERD+S+D  +R EL 
Sbjct: 94  ENRVVIYFTSLRVIRRTYNDCRAVRSILRNFRVITDERDVSIDDRFRDELN 144


>IMGA|Medtr4g155310.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
           38315213-38316857 E EGN_Mt090430 20090702
          Length = 300

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 39/51 (76%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
           + K+V+Y T+LRG+R+T+E C AVR  F  F V + ERD+SMDS +++EL+
Sbjct: 122 EKKVVIYTTTLRGVRRTFEACNAVRAAFDAFGVQICERDVSMDSGFKEELR 172


>IMGA|Medtr7g127470.1 Thioredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 29910043-29911593 E
           EGN_Mt090430 20090702
          Length = 405

 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 39/51 (76%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
           +N +V+Y T+LRGIRKT+EDC  VR I   + V + ERD+SMDS +++EL+
Sbjct: 260 ENSVVIYTTTLRGIRKTFEDCNKVRSIIESYCVCLRERDVSMDSGFKEELR 310


>IMGA|Medtr1g112130.1 Thioredoxin fold chr01_pseudomolecule_IMGAG_V3
           24056527-24057636 E EGN_Mt090430 20090702
          Length = 369

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
           D  ++ Y TSLRGIRKT+EDC  +R + + F+V   ERDISM   Y+ EL S
Sbjct: 224 DGTVIFYTTSLRGIRKTFEDCQKIRFLLQSFKVLYLERDISMHKEYKDELWS 275


>IMGA|Medtr5g080620.1 Thioredoxin fold chr05_pseudomolecule_IMGAG_V3
           30182623-30179572 E EGN_Mt090430 20090702
          Length = 262

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKEL 265
           + ++V+Y+TSLR +R  +EDC +   I R F V +DERD+SMDSS+  EL
Sbjct: 109 EQRVVIYFTSLRVVRPIFEDCKSALAILRAFHVHLDERDVSMDSSFLTEL 158


>IMGA|Medtr3g094680.1 Thioredoxin fold chr03_pseudomolecule_IMGAG_V3
           22751989-22749242 H EGN_Mt090430 20090702
          Length = 303

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%)

Query: 214 FQDNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
           F    +V+YYTSLR IR+T+ DC  V  I + F   VDERD+ +D  +R+ELQ
Sbjct: 88  FDHGGVVVYYTSLRVIRRTFNDCRTVISILKRFSTAVDERDVCVDEKFREELQ 140


>IMGA|Medtr3g029530.1 Thioredoxin-like fold
           chr03_pseudomolecule_IMGAG_V3 7780719-7778872 E
           EGN_Mt090430 20090702
          Length = 155

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)

Query: 229 IRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
           +RK YEDCC VRMI +G  + V ERD+SM   +++EL+ 
Sbjct: 2   VRKPYEDCCKVRMILKGLGIRVGERDVSMHIRFKEELKE 40