Jatropha Genome Database

JcCB0687271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0687271.10 - phase: 1 /partial
         (227 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g074500.1 GCN5-related N-acetyltransferase; Bromodoma...   148   2e-36

>IMGA|Medtr8g074500.1 GCN5-related N-acetyltransferase; Bromodomain
           chr08_pseudomolecule_IMGAG_V3 14821763-14823106 E
           EGN_Mt090430 20090702
          Length = 447

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 90/108 (83%), Gaps = 3/108 (2%)

Query: 101 SVPSLSKED--AVKIFTENLQTSGAYSAREENLKREEEAGRLKFVCLSNDGIDEHMVWLI 158
           SVP    +D  A  IFTENLQ  G YSAREE+LK+EEE+G LKFVC+ NDG+D+HMV LI
Sbjct: 53  SVPDFVVKDEAATNIFTENLQIRGGYSAREESLKKEEESGLLKFVCVCNDGVDDHMVSLI 112

Query: 159 GLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRH-NHVVGGITYRPY 205
            LKNIFARQLPNMPKEYIVRL+MDR+HKS+MVIR  N VVGG+TYRPY
Sbjct: 113 ALKNIFARQLPNMPKEYIVRLIMDRNHKSIMVIREPNRVVGGVTYRPY 160