Jatropha Genome Database

JcCB0682701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0682701.10 - phase: 0 /partial
         (98 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g092420.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...   130   2e-31
IMGA|Medtr4g160940.1 Phospholipase A2 chr04_pseudomolecule_IMGAG...   120   2e-28
IMGA|Medtr6g093370.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    74   2e-14
IMGA|Medtr6g093350.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    72   9e-14
IMGA|Medtr6g093390.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    59   5e-10
IMGA|Medtr6g093360.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    52   1e-07

>IMGA|Medtr6g092420.1 Phospholipase A2
          chr06_pseudomolecule_IMGAG_V3 19431398-19434044 E
          EGN_Mt090430 20090702
          Length = 157

 Score =  130 bits (326), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 63/73 (86%)

Query: 26 IHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDA 85
          ++ALNIG +    +VSVSKECSR+CES FCSVPP LRYGKYCGLLYSGCPGE+PCDGLDA
Sbjct: 27 VYALNIGAETTGVAVSVSKECSRQCESSFCSVPPLLRYGKYCGLLYSGCPGEKPCDGLDA 86

Query: 86 CCMKHDACVQAKN 98
          CCMKHD CV  KN
Sbjct: 87 CCMKHDQCVTVKN 99


>IMGA|Medtr4g160940.1 Phospholipase A2
          chr04_pseudomolecule_IMGAG_V3 40937290-40936185 E
          EGN_Mt090430 20090702
          Length = 158

 Score =  120 bits (301), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 60/75 (80%)

Query: 24 VPIHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 83
          +P+ ALNIGVQ    ++S+++ CSRKCES FCSVPP L YGKYCG+ YSGCPGE PCD L
Sbjct: 17 IPVSALNIGVQTTGVTISMNETCSRKCESNFCSVPPLLSYGKYCGINYSGCPGETPCDDL 76

Query: 84 DACCMKHDACVQAKN 98
          D CCM HD CV+AKN
Sbjct: 77 DTCCMNHDLCVKAKN 91


>IMGA|Medtr6g093370.1 Phospholipase A2
          chr06_pseudomolecule_IMGAG_V3 20008110-20010422 E
          EGN_Mt090430 20090702
          Length = 147

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 1/54 (1%)

Query: 41 SVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACV 94
          S S  CS+KC +E C     ++YGKYCG+ YSGCPGE+PCD +DACCM HD CV
Sbjct: 33 SSSANCSKKCIAELCDTMG-IKYGKYCGVGYSGCPGEKPCDDIDACCMAHDDCV 85


>IMGA|Medtr6g093350.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           20000020-20002208 E EGN_Mt090430 20090702
          Length = 166

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 45  ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQ 95
            CSR C++E C     ++YGKYCG+ Y GCPGE+PCD +DACCM HD CV 
Sbjct: 52  NCSRTCKAELCDTMG-IKYGKYCGVGYWGCPGEKPCDDIDACCMGHDECVD 101


>IMGA|Medtr6g093390.1 Phospholipase A2
          chr06_pseudomolecule_IMGAG_V3 20014226-20014798 E
          EGN_Mt090430 20090702
          Length = 98

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 29/34 (85%)

Query: 61 LRYGKYCGLLYSGCPGERPCDGLDACCMKHDACV 94
          ++YG+YCG+ YSGCPG +PCD +DACCM HD CV
Sbjct: 3  IKYGRYCGVGYSGCPGVKPCDDIDACCMGHDDCV 36


>IMGA|Medtr6g093360.1 Phospholipase A2
          chr06_pseudomolecule_IMGAG_V3 20005717-20006762 E
          EGN_Mt090430 20090702
          Length = 98

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 24/29 (82%)

Query: 66 YCGLLYSGCPGERPCDGLDACCMKHDACV 94
          YCG+ Y+GCP E+PCD +DACC+ HD CV
Sbjct: 36 YCGIRYTGCPDEKPCDHIDACCIAHDDCV 64