Jatropha Genome Database

JcCB0678661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0678661.10 - phase: 0 /pseudo/partial
         (335 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related chr0...   250   7e-67
IMGA|Medtr4g128830.1 Kinesin, motor region; Kinesin-related chr0...   236   2e-62

>IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related
            chr04_pseudomolecule_IMGAG_V3 30552393-30537894 E
            EGN_Mt090430 20090702
          Length = 2748

 Score =  250 bits (639), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 209/320 (65%), Gaps = 17/320 (5%)

Query: 1    NAENGLLQHGLCESNTIIADLRENNSKSSKDLQMCRNLKGKLLADIKNSFDRILRKEEET 60
            +AENGLL HGLCESN++I+DL+E N ++S++L+MCR LKG LLADI+ SFD I RKE E 
Sbjct: 1695 HAENGLLSHGLCESNSVISDLKERNFRTSQELEMCRILKGNLLADIQKSFDHITRKEAEA 1754

Query: 61   GDLSTKLTTFEKKIFDLQLQEESMLQRSNYMGSQLSILMQDLDFSNRNIAQSLIDQEKIL 120
            G+++ KL TF K + DLQLQEE +L RSN MGSQL+ L ++ D S+ +   SL+DQEK+L
Sbjct: 1755 GEMTIKLNTFVKNLSDLQLQEEMLLHRSNEMGSQLAKLTREFDLSSTDAVISLLDQEKLL 1814

Query: 121  TEKEVLLNSQAELFLTDFCSKDIESLVLASQLEEMSLQKDEAEKENRSYASVLETLKEEM 180
             +K     SQAE F+ D+ +KD E LV AS+   M+    + E+    Y++++E LK+E 
Sbjct: 1815 KQKVEDTESQAEFFMVDWYAKDFELLVHASEFRSMACNVSDMEEHFVKYSTIIEQLKKES 1874

Query: 181  VLLMVDGELKEQVLLAKDTEV--------------QDLLSWLNQGHLRITEMNEVNRSLE 226
            +   V+ EL EQVL+ K+ EV              ++LL  L Q  LR TEM EVN+  E
Sbjct: 1875 IFFQVETELAEQVLMDKEVEVSLLKREIQQEKVEKENLLMELKQNILRNTEMGEVNK--E 1932

Query: 227  GEIQLLKDAACSNDVLKGELDEVMESKARLLIQIQELEADREKLLNDLKTKEIALDGSSS 286
              + LLKD ACSN  LK EL  V ES+ RLL +IQ+LE D +K++ D+  K++A + S +
Sbjct: 1933 NAV-LLKDVACSNIALKDELVVVKESEKRLLDKIQDLEVDYDKVIGDIIAKDVAFEFSVN 1991

Query: 287  HISILDQQNQKLQKDICLLE 306
             +  L+ Q ++ +   C+LE
Sbjct: 1992 QMFFLEDQIRESESTNCMLE 2011


>IMGA|Medtr4g128830.1 Kinesin, motor region; Kinesin-related
            chr04_pseudomolecule_IMGAG_V3 30448208-30458129 H
            EGN_Mt090430 20090702
          Length = 1979

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 188/284 (66%), Gaps = 17/284 (5%)

Query: 1    NAENGLLQHGLCESNTIIADLRENNSKSSKDLQMCRNLKGKLLADIKNSFDRILRKEEET 60
            +AENGLL HGLCESN++I+DL+E N ++S++L+MCR LKG LLADI+ SFD I RKE E 
Sbjct: 1681 HAENGLLSHGLCESNSVISDLKERNFRTSQELEMCRILKGNLLADIQKSFDHITRKEAEA 1740

Query: 61   GDLSTKLTTFEKKIFDLQLQEESMLQRSNYMGSQLSILMQDLDFSNRNIAQSLIDQEKIL 120
            G+++ KL TF K + DLQLQEE +L RSN MGSQL+ L ++ D S+ +   SL+DQEK+L
Sbjct: 1741 GEMTIKLNTFVKNLSDLQLQEEMLLHRSNEMGSQLAKLTREFDLSSTDAVISLLDQEKLL 1800

Query: 121  TEKEVLLNSQAELFLTDFCSKDIESLVLASQLEEMSLQKDEAEKENRSYASVLETLKEEM 180
             +K     SQAE F+ D+ +KD E LV AS+   M+    + E+    Y++++E LK+E 
Sbjct: 1801 KQKVEDTESQAEFFMVDWYAKDFELLVHASEFRSMACNVSDMEEHFVKYSTIIEQLKKES 1860

Query: 181  VLLMVDGELKEQVLLAKDTEV--------------QDLLSWLNQGHLRITEMNEVNRSLE 226
            +   V+ EL EQVL+ K+ EV              ++LL  L Q  LR TEM EVN+  E
Sbjct: 1861 IFFQVETELAEQVLMDKEVEVSLLKREIQQEKVEKENLLMELKQNILRNTEMGEVNK--E 1918

Query: 227  GEIQLLKDAACSNDVLKGELDEVMESKARLLIQIQELEADREKL 270
              + LLKD ACSN  LK EL  V ES+ RLL +IQ+LE D +K+
Sbjct: 1919 NAV-LLKDVACSNIALKDELVVVKESEKRLLDKIQDLEVDYDKI 1961