Jatropha Genome Database

JcCB0652791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0652791.10 - phase: 1 /partial
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014960.1 Aminotransferase, class V; chr05_pseudomole...   476   e-135
IMGA|Medtr3g105250.1 Aminotransferase, class V; chr03_pseudomole...    96   2e-20

>IMGA|Medtr5g014960.1 Aminotransferase, class V;
           chr05_pseudomolecule_IMGAG_V3 4892335-4897752 E
           EGN_Mt090430 20090702
          Length = 454

 Score =  476 bits (1226), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 220/252 (87%), Positives = 238/252 (94%)

Query: 45  DEDQGVITVKGVKISARPLYLDMQATSPVDPRVLDAMLPYYLARFGNPHSRTHLYGWESD 104
           +E    IT+KGVKIS RPLYLD+QATSPVDPRVLDAMLP+YL+R+GNPHSRTH YGWESD
Sbjct: 38  EETTAGITMKGVKISGRPLYLDVQATSPVDPRVLDAMLPFYLSRYGNPHSRTHFYGWESD 97

Query: 105 SAVETARSQVAELIGASPKEIVFTSGATESNNISIKGVMKFYKEKKRHVVTTQTEHKCVL 164
            A+E ARSQVA LI ASPKEIVFTSGATESNNISIKGV+ FYKEKK+HV+TTQTEHKCVL
Sbjct: 98  DAIEHARSQVAALISASPKEIVFTSGATESNNISIKGVLHFYKEKKKHVITTQTEHKCVL 157

Query: 165 DSCRHLQQEGFEVTYLPVRNDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPMEEIGK 224
           DSCRHLQQEGF+VTYLPV +DG+VDLEKLRSAIRPDTGLVSVMAVNNEIGV+QPMEEIGK
Sbjct: 158 DSCRHLQQEGFDVTYLPVESDGLVDLEKLRSAIRPDTGLVSVMAVNNEIGVVQPMEEIGK 217

Query: 225 ICKEFNVPFHTDAAQALGKIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEP 284
           ICKEF V FHTDAAQALGKIP+DV+KWNVSLMSLSGHK+YGPKG+GALYMRRRPRIRVEP
Sbjct: 218 ICKEFGVAFHTDAAQALGKIPVDVDKWNVSLMSLSGHKVYGPKGVGALYMRRRPRIRVEP 277

Query: 285 QMNGGGQERGIR 296
           QMNGGGQERGIR
Sbjct: 278 QMNGGGQERGIR 289


>IMGA|Medtr3g105250.1 Aminotransferase, class V;
           chr03_pseudomolecule_IMGAG_V3 26286489-26280241 E
           EGN_Mt090430 20090702
          Length = 500

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 2/232 (0%)

Query: 60  ARPLYLDMQATSPVDPRVLDAMLPYYLARFGNPHSRTHLYGWESDSAVETARSQVAELIG 119
           ++ +Y+D  ATS     V+ A+  YY     N H   H    ++    E+AR +VA  I 
Sbjct: 74  SKLVYIDNAATSQKPAAVVKALQDYYEGYNSNVHRGIHYLSAKATDEYESARRKVAAFIN 133

Query: 120 AS-PKEIVFTSGATESNN-ISIKGVMKFYKEKKRHVVTTQTEHKCVLDSCRHLQQEGFEV 177
           AS  +EIVFT  ATE+ N ++    +   K+    V+T    H  ++      Q+ G  +
Sbjct: 134 ASDSREIVFTRNATEAINLVAYSWGLSNLKQGDEIVLTVAEHHSAIVPWQLVAQKVGAVL 193

Query: 178 TYLPVRNDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPMEEIGKICKEFNVPFHTDA 237
            ++ +  D I D++KL+  +   T +V+V  V+N +  + P+ +I             DA
Sbjct: 194 KFVNLNQDEIPDIDKLKEVLSKKTKIVAVHHVSNVLASVLPIRDIAHWAHGVGAKVLVDA 253

Query: 238 AQALGKIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEPQMNGG 289
            Q++  + +DV+  +   +  S HK+ GP GIG LY +      + P + GG
Sbjct: 254 CQSVPHMVVDVQNLDADFLVASSHKMCGPTGIGFLYGKMDLLSSMPPFLGGG 305