Jatropha Genome Database

JcCB0638431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0638431.10 + phase: 2 /partial
         (161 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g025300.1 hypothetical protein chr02_pseudomolecule_I...   205   7e-54
IMGA|AC235671_2.1 hypothetical protein AC235671.2 8977-11666 H E...   203   3e-53

>IMGA|Medtr2g025300.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 6672932-6669494 E
           EGN_Mt090430 20090702
          Length = 270

 Score =  205 bits (522), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 101/147 (68%), Positives = 111/147 (75%), Gaps = 25/147 (17%)

Query: 1   EAALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGC 60
           +AA  WNGEGSFL+TSSSAPYDCNDNG CDED+P VPIGRSPRTDVLL AE +VLE  G 
Sbjct: 100 QAAECWNGEGSFLYTSSSAPYDCNDNGLCDEDTPVVPIGRSPRTDVLLKAENIVLEFGG- 158

Query: 61  ADSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAI 120
                                   +GAH Y+LEKG VE RPDH+LNLIHYEDAASLS+AI
Sbjct: 159 ------------------------KGAHAYYLEKGIVESRPDHVLNLIHYEDAASLSVAI 194

Query: 121 LKKKFRGQIFLGCDNHPLSRQEVMDLV 147
           LKKKFRG+IFLGCDNHPLSRQE+MDLV
Sbjct: 195 LKKKFRGRIFLGCDNHPLSRQELMDLV 221


>IMGA|AC235671_2.1 hypothetical protein AC235671.2 8977-11666 H
           EGN_Mt090430 20090702
          Length = 328

 Score =  203 bits (517), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/146 (69%), Positives = 109/146 (74%), Gaps = 25/146 (17%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AALSWNG GSF+FTSSSAPYDCNDNG CDED+P+VPIGRSPR D+LLNAE VVLE     
Sbjct: 159 AALSWNGGGSFIFTSSSAPYDCNDNGPCDEDTPSVPIGRSPRVDILLNAENVVLEF---- 214

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAIL 121
                                 DRGAH Y+LEKG V+ RPDHILNLIHYEDAASL +AIL
Sbjct: 215 ---------------------GDRGAHNYYLEKGIVDSRPDHILNLIHYEDAASLLVAIL 253

Query: 122 KKKFRGQIFLGCDNHPLSRQEVMDLV 147
           KKK R QIFLGCDNHPLSRQE+MDLV
Sbjct: 254 KKKIRKQIFLGCDNHPLSRQEMMDLV 279