Jatropha Genome Database

JcCB0634021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0634021.10 - phase: 0 /pseudo/partial
         (152 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g023630.1 Serine acetyltransferase, N-terminal; Trime...   137   2e-33
IMGA|Medtr5g103050.1 Serine acetyltransferase, N-terminal; Trime...    91   2e-19
IMGA|Medtr4g125940.1 Trimeric LpxA-like chr04_pseudomolecule_IMG...    86   7e-18

>IMGA|Medtr5g023630.1 Serine acetyltransferase, N-terminal; Trimeric
           LpxA-like chr05_pseudomolecule_IMGAG_V3 9304754-9309459
           E EGN_Mt090430 20090702
          Length = 336

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 83/104 (79%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGKE GDRHPKVG+GALIGA +TILGNIKIGEG MIAAGSLVLK+  P S++AG 
Sbjct: 226 VTLGGTGKESGDRHPKVGEGALIGAGSTILGNIKIGEGVMIAAGSLVLKDAPPRSIVAGI 285

Query: 96  PAKLIGYVVGKDPSLTMKHDASKEFFKLVAVTFKEGISSGKCKP 139
           PAK+IG +   DPSLTM+HDA+K+FF  VA  F++  SSG+  P
Sbjct: 286 PAKVIGGLREHDPSLTMRHDATKQFFSHVATNFRDEKSSGEQNP 329


>IMGA|Medtr5g103050.1 Serine acetyltransferase, N-terminal; Trimeric
           LpxA-like chr05_pseudomolecule_IMGAG_V3
           41270863-41269404 E EGN_Mt090430 20090702
          Length = 354

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 6/95 (6%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA   ILGNIKIG+GA I AGS+V+K V P + + G 
Sbjct: 259 VTLGGTGKAHGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVIKEVPPRTTVVGN 318

Query: 96  PAKLIG-----YVVGKDPSLTMKHDAS-KEFFKLV 124
           PAKLIG       + K PS TM H A   EF+  V
Sbjct: 319 PAKLIGGKNNPIKLDKIPSHTMDHVAHISEFYDYV 353


>IMGA|Medtr4g125940.1 Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V3 29783033-29781873 E
           EGN_Mt090430 20090702
          Length = 175

 Score = 85.9 bits (211), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 51/66 (77%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA ATILGNIKIGEGA I AGS+VL +V P +   G 
Sbjct: 80  VTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKIGAGSVVLIDVPPRTTAVGN 139

Query: 96  PAKLIG 101
           PA+L+G
Sbjct: 140 PARLVG 145