Jatropha Genome Database
- JcCB0623091.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0623091.20 - phase: 0 /pseudo/partial
(119 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase chr04_ps... 156 2e-39
IMGA|Medtr8g018580.1 Prenyltransferase/squalene oxidase chr08_ps... 132 4e-32
IMGA|Medtr8g018630.1 Prenyltransferase/squalene oxidase chr08_ps... 129 4e-31
IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase chr05_ps... 120 1e-28
IMGA|Medtr8g018520.1 Prenyltransferase/squalene oxidase chr08_ps... 119 5e-28
IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase chr06_ps... 112 5e-26
IMGA|Medtr8g018530.1 mixed-amyrin synthase, putative chr08_pseud... 72 7e-14
IMGA|Medtr8g018540.1 Prenyltransferase/squalene oxidase chr08_ps... 69 7e-13
>IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase
chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
EGN_Mt090430 20090702
Length = 771
Score = 156 bits (395), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
YV LEG RSN+VHT WA+MGL+ + +RDPTPLHRAA L+INSQLE+GD+PQQEITGVF
Sbjct: 678 YVPLEGSRSNVVHTAWALMGLIHAGQAERDPTPLHRAAKLLINSQLEEGDWPQQEITGVF 737
Query: 86 MKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
MKNCMLHY YR+IYPLWALAEYR RVPLPST +
Sbjct: 738 MKNCMLHYPMYRDIYPLWALAEYRRRVPLPSTAV 771
>IMGA|Medtr8g018580.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3402335-3399370 E
EGN_Mt090430 20090702
Length = 328
Score = 132 bits (332), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
YV LEG +SN+V T WA+M L+ + +RDPTPLHRA LIIN Q E+GD+PQQE+T VF
Sbjct: 235 YVPLEGSQSNIVQTAWALMALIHAGQAERDPTPLHRAVKLIINLQQEEGDWPQQELTAVF 294
Query: 86 MKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
MKNCMLHYA +R+I+P+WALAEYR + LPS +
Sbjct: 295 MKNCMLHYAMFRDIFPMWALAEYRKGIMLPSIAV 328
>IMGA|Medtr8g018630.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3433864-3431665 E
EGN_Mt090430 20090702
Length = 244
Score = 129 bits (324), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
YV LEG +SN+V T+WA++ L+ + +RD TPLHRA LIIN Q E+GD+PQQE+T VF
Sbjct: 151 YVPLEGSQSNIVQTSWALIALIHAGQAERDATPLHRAVKLIINLQQEEGDWPQQELTAVF 210
Query: 86 MKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
MKNCMLHYA +R+I+P+WALAEYR + LPS +
Sbjct: 211 MKNCMLHYAMFRDIFPMWALAEYRKGIMLPSIAV 244
>IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase
chr05_pseudomolecule_IMGAG_V3 1770254-1758822 E
EGN_Mt090430 20090702
Length = 757
Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
Y LE RS++V+T WAM+ L+ + RDPTPLHRAA +INSQ+E+GDFPQ+EI GVF
Sbjct: 667 YSNLESNRSHVVNTGWAMLALIEAEQAKRDPTPLHRAAVCLINSQMENGDFPQEEIMGVF 726
Query: 86 MKNCMLHYAAYRNIYPLWALAEYRNRV 112
KNCM+ YAAYRNI+P+WAL EYR V
Sbjct: 727 NKNCMITYAAYRNIFPIWALGEYRRHV 753
>IMGA|Medtr8g018520.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3367543-3364864 E
EGN_Mt090430 20090702
Length = 271
Score = 119 bits (297), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Query: 25 QKYVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITG 83
+ YV LEG RSN+V T WA+MGL+ + + DPT LHRAA LIINSQLE+GD+PQQE+TG
Sbjct: 176 KTYVPLEGGRSNIVQTAWALMGLIHAGQAEIDPTTLHRAAKLIINSQLEEGDWPQQELTG 235
Query: 84 VFMKNCMLHYAAYRNIYPLWALAEYRNRV 112
+K CMLHY YR+ +P+ ALAEYR RV
Sbjct: 236 ASLKTCMLHYPMYRDNFPMLALAEYRKRV 264
>IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase
chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
EGN_Mt090430 20090702
Length = 772
Score = 112 bits (279), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
Y LEG +S++V+T WAM+ L+ + +RDPTPLH AA ++INSQ+E+G+FPQQE+ GVF
Sbjct: 683 YTNLEGNKSHVVNTAWAMLALIEAGQAERDPTPLHHAAKVLINSQMENGEFPQQEMIGVF 742
Query: 86 MKNCMLHYAAYRNIYPLWALAE-YRNRVPL 114
KNC ++Y+A RNI+P+WAL + YR+RV L
Sbjct: 743 NKNCTINYSACRNIFPIWALGDQYRSRVLL 772
>IMGA|Medtr8g018530.1 mixed-amyrin synthase, putative
chr08_pseudomolecule_IMGAG_V3 3371840-3370122 H
EGN_Mt090430 20090702
Length = 75
Score = 72.0 bits (175), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Query: 73 DGDFPQ----QEITGVFMKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
D PQ +E+TGVFMKNCMLHYA YR+I+P+WALAEYR R+ L S+ +
Sbjct: 25 DDTMPQTTTAKELTGVFMKNCMLHYAMYRDIFPMWALAEYRRRILLLSSTV 75
>IMGA|Medtr8g018540.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3381520-3378979 E
EGN_Mt090430 20090702
Length = 221
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 27 YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQ 79
Y LEG +SN+V T+WA+M L+ + +RD TPLHRA LIIN QL++GD+PQQ
Sbjct: 166 YAPLEGSQSNIVQTSWALMALIHAGQAERDATPLHRAVKLIINLQLKEGDWPQQ 219